RNA–Protein interactions for RNA: ENSMUST00000109024.8

Lima1-202, Transcript of LIM domain and actin-binding protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Lima1, Length 4,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1-202ENSMUST00000109024 Fan1Q69ZT1 1020 aa12.38□□□□□ -0.43
Lima1-202ENSMUST00000109024 Ttll13A4Q9F6 804 aa12.37□□□□□ -0.43
Lima1-202ENSMUST00000109024 EprsQ8CGC7 1512 aaKnown RBP12.37□□□□□ -0.43
Lima1-202ENSMUST00000109024 Fam184bQ0KK56 942 aa12.37□□□□□ -0.43
Lima1-202ENSMUST00000109024 Gtf3c3Q3TMP1 882 aa12.37□□□□□ -0.43
Lima1-202ENSMUST00000109024 Ncoa2Q61026 1462 aa12.36□□□□□ -0.43
Lima1-202ENSMUST00000109024 NudcO35685 332 aaKnown RBP12.35□□□□□ -0.43
Lima1-202ENSMUST00000109024 Map7O88735 730 aa12.35□□□□□ -0.43
Lima1-202ENSMUST00000109024 Ksr2Q3UVC0 959 aa12.35□□□□□ -0.43
Lima1-202ENSMUST00000109024 Znf330Q922H9 316 aa12.34□□□□□ -0.43
Lima1-202ENSMUST00000109024 Stk26Q99JT2 416 aa12.34□□□□□ -0.43
Lima1-202ENSMUST00000109024 Ncoa1P70365 1447 aa12.34□□□□□ -0.43
Lima1-202ENSMUST00000109024 Kif7B7ZNG0 1348 aa12.33□□□□□ -0.43
Lima1-202ENSMUST00000109024 Dnttip2Q8R2M2 758 aaKnown RBP12.33□□□□□ -0.44
Lima1-202ENSMUST00000109024 Spag9Q58A65 1321 aaKnown RBP12.33□□□□□ -0.44
Lima1-202ENSMUST00000109024 Jph4Q80WT0 628 aa12.32□□□□□ -0.44
Lima1-202ENSMUST00000109024 Eif2s2Q99L45 331 aaKnown RBP12.32□□□□□ -0.44
Lima1-202ENSMUST00000109024 Mfap1aC0HKD8 439 aaKnown RBP12.32□□□□□ -0.44
Lima1-202ENSMUST00000109024 Mfap1bC0HKD9 439 aaKnown RBP12.32□□□□□ -0.44
Lima1-202ENSMUST00000109024 Abcc5Q9R1X5 1436 aa12.32□□□□□ -0.44
Lima1-202ENSMUST00000109024 Tmco5bQ80X59 307 aa12.31□□□□□ -0.44
Lima1-202ENSMUST00000109024 1700019A02RikA0A087WPV9 146 aa12.31□□□□□ -0.44
Lima1-202ENSMUST00000109024 NexmifQ5DTT1 1515 aa12.31□□□□□ -0.44
Lima1-202ENSMUST00000109024 Lemd3Q9WU40 921 aa12.31□□□□□ -0.44
Lima1-202ENSMUST00000109024 Myom3A2ABU4 1439 aa12.31□□□□□ -0.44
Lima1-202ENSMUST00000109024 Arhgap31A6X8Z5 1425 aa12.31□□□□□ -0.44
Lima1-202ENSMUST00000109024 Ccdc30Q8BVF4 654 aa12.3□□□□□ -0.44
Lima1-202ENSMUST00000109024 Ak7Q9D2H2 614 aa12.3□□□□□ -0.44
Lima1-202ENSMUST00000109024 AU015836B2RUM3 263 aa12.3□□□□□ -0.44
Lima1-202ENSMUST00000109024 Senp3Q9EP97 568 aaKnown RBP12.3□□□□□ -0.44
Lima1-202ENSMUST00000109024 Gm1043A0A140LJC2 1431 aa12.3□□□□□ -0.44
Lima1-202ENSMUST00000109024 Usp40Q8BWR4 1235 aa12.3□□□□□ -0.44
Lima1-202ENSMUST00000109024 Kif16bB1AVY7 1312 aa12.29□□□□□ -0.44
Lima1-202ENSMUST00000109024 Liat1Q810M6 228 aa12.29□□□□□ -0.44
Lima1-202ENSMUST00000109024 SynmQ70IV5 1561 aa12.29□□□□□ -0.44
Lima1-202ENSMUST00000109024 Il16O54824 1322 aa12.28□□□□□ -0.44
Lima1-202ENSMUST00000109024 Mre11Q61216 706 aa12.28□□□□□ -0.44
Lima1-202ENSMUST00000109024 KnstrnQ9D9Z1 312 aaKnown RBP12.28□□□□□ -0.44
Lima1-202ENSMUST00000109024 Urb2E9Q7L1 1524 aaKnown RBP12.28□□□□□ -0.44
Lima1-202ENSMUST00000109024 PtmaP26350 111 aa12.27□□□□□ -0.44
Lima1-202ENSMUST00000109024 Irx6Q9ER75 438 aa12.27□□□□□ -0.44
Lima1-202ENSMUST00000109024 Plin1Q8CGN5 517 aa12.27□□□□□ -0.45
Lima1-202ENSMUST00000109024 Rprd2Q6NXI6 1469 aaKnown RBP12.27□□□□□ -0.45
Lima1-202ENSMUST00000109024 Ppp2r1aQ76MZ3 589 aa12.26□□□□□ -0.45
Lima1-202ENSMUST00000109024 Iqcf3Q9D498 203 aa12.26□□□□□ -0.45
Lima1-202ENSMUST00000109024 Pde4cQ3UEI1 686 aa12.26□□□□□ -0.45
Lima1-202ENSMUST00000109024 Pank1Q8K4K6 548 aa12.26□□□□□ -0.45
Lima1-202ENSMUST00000109024 Mug1P28665 1476 aa12.26□□□□□ -0.45
Lima1-202ENSMUST00000109024 TnnQ80Z71 1560 aa12.26□□□□□ -0.45
Lima1-202ENSMUST00000109024 Ralbp1Q62172 648 aa12.26□□□□□ -0.45
Lima1-202ENSMUST00000109024 Tsen2Q6P7W5 460 aa12.26□□□□□ -0.45
Lima1-202ENSMUST00000109024 Safb2Q80YR5 991 aaKnown RBP12.26□□□□□ -0.45
Lima1-202ENSMUST00000109024 Ccar1Q8CH18 1146 aaKnown RBP12.25□□□□□ -0.45
Lima1-202ENSMUST00000109024 Cd109Q8R422 1442 aa12.25□□□□□ -0.45
Lima1-202ENSMUST00000109024 Ythdc1E9Q5K9 736 aaKnown RBP12.24□□□□□ -0.45
Lima1-202ENSMUST00000109024 U2surpQ6NV83 1029 aaKnown RBP12.24□□□□□ -0.45
Lima1-202ENSMUST00000109024 Stard8Q8K031 1019 aa12.24□□□□□ -0.45
Lima1-202ENSMUST00000109024 GsdmaQ9EST1 446 aa12.24□□□□□ -0.45
Lima1-202ENSMUST00000109024 GorabQ8BRM2 368 aa12.23□□□□□ -0.45
Lima1-202ENSMUST00000109024 Chmp4bQ9D8B3 224 aaKnown RBP12.23□□□□□ -0.45
Lima1-202ENSMUST00000109024 Fam163aQ8CAA5 168 aa12.22□□□□□ -0.45
Lima1-202ENSMUST00000109024 Birc3O08863 600 aa12.22□□□□□ -0.45
Lima1-202ENSMUST00000109024 Plekhh1Q80TI1 1356 aa12.22□□□□□ -0.45
Lima1-202ENSMUST00000109024 Trim58Q5NCC9 485 aa12.22□□□□□ -0.45
Lima1-202ENSMUST00000109024 KarsQ99MN1 595 aaKnown RBP12.22□□□□□ -0.45
Lima1-202ENSMUST00000109024 Camsap2Q8C1B1 1461 aa12.22□□□□□ -0.45
Lima1-202ENSMUST00000109024 Pknox2Q8BG99 474 aa12.22□□□□□ -0.45
Lima1-202ENSMUST00000109024 Rfx7F8VPJ6 1459 aa12.21□□□□□ -0.45
Lima1-202ENSMUST00000109024 NgefQ8CHT1 710 aa12.21□□□□□ -0.45
Lima1-202ENSMUST00000109024 PrxO55103 1391 aa12.21□□□□□ -0.46
Lima1-202ENSMUST00000109024 Eif4g1Q6NZJ6 1600 aaKnown RBP12.21□□□□□ -0.46
Lima1-202ENSMUST00000109024 Plb1Q3TTY0 1478 aa12.2□□□□□ -0.46
Lima1-202ENSMUST00000109024 Gpatch8A2A6A1 1505 aa12.2□□□□□ -0.46
Lima1-202ENSMUST00000109024 Map3k5O35099 1380 aa12.2□□□□□ -0.46
Lima1-202ENSMUST00000109024 Kdm5bQ80Y84 1544 aa12.2□□□□□ -0.46
Lima1-202ENSMUST00000109024 Ccdc183A2AJB1 534 aa12.2□□□□□ -0.46
Lima1-202ENSMUST00000109024 Plcd4Q8K3R3 807 aa12.2□□□□□ -0.46
Lima1-202ENSMUST00000109024 Ccdc60Q8C4J0 545 aa12.19□□□□□ -0.46
Lima1-202ENSMUST00000109024 Rab3gap2Q8BMG7 1366 aa12.19□□□□□ -0.46
Lima1-202ENSMUST00000109024 Ylpm1Q9R0I7 1386 aaKnown RBP12.18□□□□□ -0.46
Lima1-202ENSMUST00000109024 Znf316Q6PGE4 1016 aa12.18□□□□□ -0.46
Lima1-202ENSMUST00000109024 Pik3c2gO70167 1506 aa12.17□□□□□ -0.46
Lima1-202ENSMUST00000109024 Lmod3E9QA62 571 aa12.17□□□□□ -0.46
Lima1-202ENSMUST00000109024 Soga1E1U8D0 1418 aa12.17□□□□□ -0.46
Lima1-202ENSMUST00000109024 Nsd2Q8BVE8 1365 aa12.16□□□□□ -0.46
Lima1-202ENSMUST00000109024 Thoc2B1AZI6 1594 aaKnown RBP12.16□□□□□ -0.46
Lima1-202ENSMUST00000109024 BC005561E9Q5E2 1589 aa12.15□□□□□ -0.46
Lima1-202ENSMUST00000109024 HnrnpuQ8VEK3 800 aaKnown RBP12.15□□□□□ -0.46
Lima1-202ENSMUST00000109024 Crocc2F6XLV1 1638 aa12.15□□□□□ -0.46
Lima1-202ENSMUST00000109024 Prdm16A2A935 1275 aa12.15□□□□□ -0.46
Lima1-202ENSMUST00000109024 SlkO54988 1233 aa12.15□□□□□ -0.46
Lima1-202ENSMUST00000109024 CenpjQ569L8 1344 aa12.15□□□□□ -0.46
Lima1-202ENSMUST00000109024 Grin2aP35436 1464 aa12.15□□□□□ -0.47
Lima1-202ENSMUST00000109024 Hsp90b1P08113 802 aaKnown RBP12.14□□□□□ -0.47
Lima1-202ENSMUST00000109024 Erich6bQ9D4S6 220 aa12.14□□□□□ -0.47
Lima1-202ENSMUST00000109024 Ncoa3O09000 1398 aa12.14□□□□□ -0.47
Lima1-202ENSMUST00000109024 ErbinQ80TH2 1402 aa12.14□□□□□ -0.47
Lima1-202ENSMUST00000109024 Apaf1O88879 1249 aa12.14□□□□□ -0.47
Lima1-202ENSMUST00000109024 Rfx1P48377 963 aa12.14□□□□□ -0.47
Lima1-202ENSMUST00000109024 Erich3F6QRE9 1637 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms