RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 Znf608Q56A10 1511 aa15.54■□□□□ 0.08
Ebf3-202ENSMUST00000106118 Aplp2Q06335 707 aa15.54■□□□□ 0.08
Ebf3-202ENSMUST00000106118 Cwc22Q8C5N3 908 aaKnown RBP15.54■□□□□ 0.08
Ebf3-202ENSMUST00000106118 Cd109Q8R422 1442 aa15.54■□□□□ 0.08
Ebf3-202ENSMUST00000106118 Pprc1Q6NZN1 1644 aa15.53■□□□□ 0.08
Ebf3-202ENSMUST00000106118 Sin3aQ60520 1274 aaKnown RBP15.52■□□□□ 0.08
Ebf3-202ENSMUST00000106118 Cep170Q6A065 1588 aa15.52■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Map3k5O35099 1380 aa15.52■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Nsd2Q8BVE8 1365 aa15.51■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Rock1P70335 1354 aa15.51■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Cdc42bpbQ7TT50 1713 aa15.5■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Pde4cQ3UEI1 686 aa15.5■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Myom3A2ABU4 1439 aa15.5■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Eif5bQ05D44 1216 aaKnown RBP15.5■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Zfyve16Q80U44 1528 aa15.48■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Dapk1Q80YE7 1442 aa15.48■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Kidins220E9Q9B7 1793 aa15.48■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Card11Q8CIS0 1159 aa15.47■□□□□ 0.07
Ebf3-202ENSMUST00000106118 Kif14L0N7N1 1674 aaKnown RBP15.46■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Rundc1Q0VDN7 615 aa15.45■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Fam71e1A1L3C1 212 aa15.45■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Grwd1Q810D6 446 aaKnown RBP15.45■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Atp7aQ64430 1491 aa15.44■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Gm156Q58A37 223 aa15.44■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Ncoa1P70365 1447 aa15.44■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Kif1bQ60575 1816 aaKnown RBP15.44■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Kif3bQ61771 747 aa15.44■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Mbd5B1AYB6 1498 aa15.43■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Ppip5k1A2ARP1 1436 aa15.43■□□□□ 0.06
Ebf3-202ENSMUST00000106118 OvosQ3UU35 1456 aa15.42■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Cpsf1Q9EPU4 1441 aaKnown RBP15.42■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Polr3aB2RXC6 1390 aa15.42■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Rock2P70336 1388 aa15.41■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Dot1lQ6XZL8 1540 aa15.41■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Usp54Q8BL06 1588 aaKnown RBP15.41■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Smg6P61406 1418 aaKnown RBP15.41■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Asxl1P59598 1514 aa15.4■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Mug2P28666 1451 aa15.4■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Mroh3A0A1D5RM54 893 aa15.4■□□□□ 0.06
Ebf3-202ENSMUST00000106118 SafbD3YXK2 937 aaKnown RBP15.4■□□□□ 0.06
Ebf3-202ENSMUST00000106118 Abca17E9PX95 1733 aa15.39■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Abca9Q8K449 1623 aa15.39■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Erich6D3Z6S9 713 aa15.39■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Ylpm1Q9R0I7 1386 aaKnown RBP15.39■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Bcl11aQ9QYE3 773 aa15.39■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Nos1Q9Z0J4 1429 aa15.39■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Znf518aB2RRF6 1478 aaKnown RBP15.37■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Tnnt3Q9QZ47 272 aa15.37■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Washc2Q6PGL7 1334 aa15.37■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Robo2Q7TPD3 1470 aa15.36■□□□□ 0.05
Ebf3-202ENSMUST00000106118 RalgapbQ8BQZ4 1484 aa15.36■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Plekhg5Q66T02 1073 aa15.35■□□□□ 0.05
Ebf3-202ENSMUST00000106118 ShprhQ7TPQ3 1674 aa15.35■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Adgrl3Q80TS3 1537 aa15.35■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Naip6Q9JIB6 1403 aa15.34■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Ak9G3UYQ4 1894 aa15.34■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Xrn1P97789 1719 aaKnown RBP15.33■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Plch2A2AP18 1501 aa15.33■□□□□ 0.05
Ebf3-202ENSMUST00000106118 Ifit1bl1D3Z6F0 470 aa15.33■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Gm13695A2AK44 830 aa15.32■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Iqgap1Q9JKF1 1657 aaKnown RBP15.32■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Tarbp1E9Q368 1579 aa15.32■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Atp10aO54827 1508 aa15.31■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Edc4Q3UJB9 1406 aaKnown RBP15.31■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Cdk13Q69ZA1 1511 aaKnown RBP15.31■□□□□ 0.04
Ebf3-202ENSMUST00000106118 NrdcQ8BHG1 1161 aa15.3■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Ttc21bQ0HA38 1315 aa15.3■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Ppp1r18Q8BQ30 594 aa15.29■□□□□ 0.04
Ebf3-202ENSMUST00000106118 ErbinQ80TH2 1402 aa15.29■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Os9Q8K2C7 672 aa15.29■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Myo5cE9Q1F5 1742 aa15.29■□□□□ 0.04
Ebf3-202ENSMUST00000106118 4933416C03RikQ3V063 378 aa15.28■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Uggt2E9Q4X2 1504 aa15.28■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Kdm5cP41230 1554 aa15.28■□□□□ 0.04
Ebf3-202ENSMUST00000106118 Anp32bQ9EST5 272 aaKnown RBP15.27■□□□□ 0.03
Ebf3-202ENSMUST00000106118 AglF8VPN4 1532 aa15.26■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Gli2Q0VGT2 1544 aa15.26■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Mrs2Q5NCE8 434 aa15.25■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Stk24Q99KH8 431 aa15.24■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Clasp1Q80TV8 1535 aaKnown RBP15.23■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Anp32aO35381 247 aa15.23■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Abcc6Q9R1S7 1498 aa15.23■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Topbp1Q6ZQF0 1515 aa15.23■□□□□ 0.03
Ebf3-202ENSMUST00000106118 AnkarA2RT91 1465 aa15.23■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Depdc5P61460 1591 aa15.22■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Cdc42bpgQ80UW5 1551 aa15.22■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Rsph4aQ8BYM7 716 aa15.22■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Arid4bA2CG63 1314 aaKnown RBP15.22■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Ptch1Q61115 1434 aa15.21■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Kdm2aP59997 1161 aa15.21■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Stard8Q8K031 1019 aa15.21■□□□□ 0.03
Ebf3-202ENSMUST00000106118 Gm20521D3Z5F7 333 aa15.2■□□□□ 0.02
Ebf3-202ENSMUST00000106118 Srpk2O54781 681 aaKnown RBP15.2■□□□□ 0.02
Ebf3-202ENSMUST00000106118 Abca6Q8K441 1624 aa15.2■□□□□ 0.02
Ebf3-202ENSMUST00000106118 Fndc1E9Q043 1732 aa15.19■□□□□ 0.02
Ebf3-202ENSMUST00000106118 Srcin1Q9QWI6 1250 aa15.19■□□□□ 0.02
Ebf3-202ENSMUST00000106118 Tulp4Q9JIL5 1547 aa15.18■□□□□ 0.02
Ebf3-202ENSMUST00000106118 Adamts13Q769J6 1426 aa15.18■□□□□ 0.02
Ebf3-202ENSMUST00000106118 Zbtb4Q5F293 982 aa15.18■□□□□ 0.02
Ebf3-202ENSMUST00000106118 Setd1aE9PYH6 1716 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms