RNA–Protein interactions for RNA: ENSMUST00000103633.1

Trav16n-201, Transcript of T cell receptor alpha variable 16n, mousemouse

APPRIS ALT2 BASIC

Gene Trav16n, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16n-201ENSMUST00000103633 Znf330Q922H9 316 aa6.31□□□□□ -1.4
Trav16n-201ENSMUST00000103633 Fam135aQ6NS59 1506 aa6.3□□□□□ -1.4
Trav16n-201ENSMUST00000103633 Ints3Q7TPD0 1041 aaKnown RBP6.3□□□□□ -1.4
Trav16n-201ENSMUST00000103633 Ripply1Q2WG77 201 aa6.29□□□□□ -1.4
Trav16n-201ENSMUST00000103633 Rem2Q8VEL9 341 aa6.29□□□□□ -1.4
Trav16n-201ENSMUST00000103633 Chst12Q99LL3 419 aa6.29□□□□□ -1.4
Trav16n-201ENSMUST00000103633 Irf5P56477 497 aa6.28□□□□□ -1.4
Trav16n-201ENSMUST00000103633 Pxylp1Q8BHA9 480 aa6.26□□□□□ -1.41
Trav16n-201ENSMUST00000103633 EdaraddQ8VHX2 208 aa6.26□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Ccdc96Q9CR92 584 aa6.26□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Atad2bE9Q166 1460 aaKnown RBP6.26□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Fkbp15Q6P9Q6 1216 aaKnown RBP6.25□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Pcdhgb4Q91XX6 912 aa6.25□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Rgs9O54828 675 aa6.24□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Scarf1Q5ND28 820 aa6.24□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Smarca2Q6DIC0 1577 aa6.23□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Gm20503G3UZK1 150 aa6.23□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Znf354bQ9QXT9 601 aa6.23□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Pbx2O35984 430 aa6.22□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Col9a1Q05722 921 aa6.22□□□□□ -1.41
Trav16n-201ENSMUST00000103633 Ttll13A4Q9F6 804 aa6.21□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Ano8Q6PB70 1060 aa6.21□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Baz1aO88379 1555 aa6.2□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Rbm46P86049 533 aa6.2□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Clcn1Q64347 994 aa6.2□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Rccd1Q8BTU7 377 aa6.2□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Ms4a4cQ9D3F6 226 aa6.2□□□□□ -1.42
Trav16n-201ENSMUST00000103633 SmapQ9R0P4 181 aaKnown RBP6.2□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Iqgap2Q3UQ44 1575 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Prpmp5E9PXN1 296 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Phox2bO35690 314 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Krtap4-1Q3UUY3 169 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 MetrnQ8C1Q4 291 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 RragcQ99K70 398 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Mfsd10Q9D2V8 456 aaKnown RBP6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Ccdc180J3QNE4 1664 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Erbb3Q61526 1339 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Frmpd1A2AKB4 1549 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Wdr62Q3U3T8 1523 aa6.19□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Ppfia1B2RXQ2 1266 aa6.18□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Lhx8O35652 367 aa6.18□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Hmx1O70218 332 aa6.18□□□□□ -1.42
Trav16n-201ENSMUST00000103633 OplahQ8K010 1288 aa6.18□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Cecr2E9Q2Z1 1453 aa6.17□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Rhox13F6YCR7 232 aa6.17□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Smpd1Q04519 627 aa6.17□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Themis2Q91YX0 663 aa6.17□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Smarca4Q3TKT4 1613 aaKnown RBP6.17□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Ercc6F8VPZ5 1481 aa6.16□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Brpf1B2RRD7 1212 aa6.16□□□□□ -1.42
Trav16n-201ENSMUST00000103633 OatP29758 439 aa6.16□□□□□ -1.42
Trav16n-201ENSMUST00000103633 ElnP54320 860 aa6.16□□□□□ -1.42
Trav16n-201ENSMUST00000103633 MarsQ68FL6 902 aaKnown RBP6.16□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Arid5bQ8BM75 1188 aaKnown RBP6.16□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Gm11939A2A592 99 aa6.15□□□□□ -1.42
Trav16n-201ENSMUST00000103633 TsksO54887 585 aa6.15□□□□□ -1.42
Trav16n-201ENSMUST00000103633 Q9CQ90 155 aa6.15□□□□□ -1.42
Trav16n-201ENSMUST00000103633 NppbP40753 121 aa6.14□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Recql4Q75NR7 1216 aaKnown RBP6.14□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Kcnc4Q8R1C0 628 aa6.14□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Gpc1Q9QZF2 557 aa6.14□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Large2Q5XPT3 690 aa6.13□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Crybg2B7ZCC2 1516 aa6.13□□□□□ -1.43
Trav16n-201ENSMUST00000103633 AW822073A0A0N4SUK1 652 aa6.12□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Cyp8b1O88962 500 aa6.12□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Slc27a5Q4LDG0 689 aa6.12□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Neurod2Q62414 383 aa6.12□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Wdr44Q6NVE8 915 aa6.12□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Map2k7Q8CE90 535 aa6.12□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Trbv21A0A0A6YX06 97 aa6.11□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Atf4Q06507 349 aa6.11□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Rnf40Q3U319 1001 aa6.11□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Setdb2Q8C267 713 aa6.11□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Trim32Q8CH72 655 aa6.11□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Sulf1Q8K007 870 aa6.11□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Emid1Q91VF5 444 aa6.11□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Speer3W4VSP1 261 aa6.11□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Lce6aD3YV94 81 aa6.1□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Dixdc1Q80Y83 711 aa6.1□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Kcnv2Q8CFS6 562 aa6.1□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Os9Q8K2C7 672 aa6.1□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Lrriq1Q0P5X1 1673 aa6.1□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Zcchc6Q5BLK4 1491 aaKnown RBP6.09□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Pcdh10E9PXQ7 1057 aa6.09□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Thap8E9Q695 213 aa6.09□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Dsg2O55111 1122 aa6.09□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Pola2P33611 600 aa6.09□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Mre11Q61216 706 aa6.09□□□□□ -1.43
Trav16n-201ENSMUST00000103633 MlecQ6ZQI3 291 aaKnown RBP6.09□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Spaca7Q9D2S4 182 aa6.09□□□□□ -1.43
Trav16n-201ENSMUST00000103633 Ccdc102aQ3TMW1 549 aa6.08□□□□□ -1.44
Trav16n-201ENSMUST00000103633 Fam160a1Q505K2 1081 aa6.08□□□□□ -1.44
Trav16n-201ENSMUST00000103633 Rad21Q61550 635 aaKnown RBP6.08□□□□□ -1.44
Trav16n-201ENSMUST00000103633 Gabbr2Q80T41 940 aa6.07□□□□□ -1.44
Trav16n-201ENSMUST00000103633 Sall2Q9QX96 1004 aa6.07□□□□□ -1.44
Trav16n-201ENSMUST00000103633 Mrc2Q64449 1479 aa6.07□□□□□ -1.44
Trav16n-201ENSMUST00000103633 Adam19O35674 920 aa6.06□□□□□ -1.44
Trav16n-201ENSMUST00000103633 NclP09405 707 aaKnown RBP6.06□□□□□ -1.44
Trav16n-201ENSMUST00000103633 Prr18Q6PAN7 307 aa6.06□□□□□ -1.44
Trav16n-201ENSMUST00000103633 Phldb1Q6PDH0 1371 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms