RNA–Protein interactions for RNA: ENSMUST00000098036.8

Cln3-203, Transcript of Battenin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cln3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-203ENSMUST00000098036 Znf518aB2RRF6 1478 aaKnown RBP19.66■□□□□ 0.74
Cln3-203ENSMUST00000098036 AlkP97793 1621 aa19.66■□□□□ 0.74
Cln3-203ENSMUST00000098036 Abca17E9PX95 1733 aa19.66■□□□□ 0.74
Cln3-203ENSMUST00000098036 Safb2Q80YR5 991 aaKnown RBP19.66■□□□□ 0.74
Cln3-203ENSMUST00000098036 Mphosph9A6H5Y1 991 aa19.63■□□□□ 0.73
Cln3-203ENSMUST00000098036 Naip6Q9JIB6 1403 aa19.63■□□□□ 0.73
Cln3-203ENSMUST00000098036 Supt6hQ62383 1726 aaKnown RBP19.63■□□□□ 0.73
Cln3-203ENSMUST00000098036 Trpm2Q91YD4 1506 aa19.61■□□□□ 0.73
Cln3-203ENSMUST00000098036 Kif21bQ9QXL1 1668 aa19.61■□□□□ 0.73
Cln3-203ENSMUST00000098036 Kif3bQ61771 747 aa19.61■□□□□ 0.73
Cln3-203ENSMUST00000098036 Spag9Q58A65 1321 aaKnown RBP19.6■□□□□ 0.73
Cln3-203ENSMUST00000098036 Brwd3A2AHJ4 1799 aa19.59■□□□□ 0.73
Cln3-203ENSMUST00000098036 Plch2A2AP18 1501 aa19.59■□□□□ 0.73
Cln3-203ENSMUST00000098036 Ssh2Q5SW75 1423 aa19.59■□□□□ 0.73
Cln3-203ENSMUST00000098036 Zbtb7cQ8VCZ7 619 aa19.58■□□□□ 0.73
Cln3-203ENSMUST00000098036 Usp54Q8BL06 1588 aaKnown RBP19.57■□□□□ 0.72
Cln3-203ENSMUST00000098036 Afap1Q80YS6 731 aa19.57■□□□□ 0.72
Cln3-203ENSMUST00000098036 Topbp1Q6ZQF0 1515 aa19.57■□□□□ 0.72
Cln3-203ENSMUST00000098036 Uggt2E9Q4X2 1504 aa19.56■□□□□ 0.72
Cln3-203ENSMUST00000098036 MyclP10166 368 aa19.56■□□□□ 0.72
Cln3-203ENSMUST00000098036 Zfp644E9QA22 1323 aa19.55■□□□□ 0.72
Cln3-203ENSMUST00000098036 Abca6Q8K441 1624 aa19.54■□□□□ 0.72
Cln3-203ENSMUST00000098036 Clstn2Q9ER65 966 aa19.53■□□□□ 0.72
Cln3-203ENSMUST00000098036 CltcQ68FD5 1675 aaKnown RBP19.53■□□□□ 0.72
Cln3-203ENSMUST00000098036 Talpid3E9PV87 1520 aa19.53■□□□□ 0.72
Cln3-203ENSMUST00000098036 Nup155Q99P88 1391 aaKnown RBP19.52■□□□□ 0.72
Cln3-203ENSMUST00000098036 Myo5cE9Q1F5 1742 aa19.52■□□□□ 0.72
Cln3-203ENSMUST00000098036 ShprhQ7TPQ3 1674 aa19.5■□□□□ 0.71
Cln3-203ENSMUST00000098036 Kif1bQ60575 1816 aaKnown RBP19.5■□□□□ 0.71
Cln3-203ENSMUST00000098036 Myom2Q14BI5 1463 aa19.5■□□□□ 0.71
Cln3-203ENSMUST00000098036 Hspa5P20029 655 aaKnown RBP19.49■□□□□ 0.71
Cln3-203ENSMUST00000098036 PtprmP28828 1452 aa19.49■□□□□ 0.71
Cln3-203ENSMUST00000098036 RictorQ6QI06 1708 aa19.48■□□□□ 0.71
Cln3-203ENSMUST00000098036 Naip5Q9R016 1403 aa19.47■□□□□ 0.71
Cln3-203ENSMUST00000098036 Pkd2O35245 966 aa19.47■□□□□ 0.71
Cln3-203ENSMUST00000098036 Hnrnpul2Q00PI9 745 aaKnown RBP19.47■□□□□ 0.71
Cln3-203ENSMUST00000098036 Rprd2Q6NXI6 1469 aaKnown RBP19.47■□□□□ 0.71
Cln3-203ENSMUST00000098036 Ttll5Q8CHB8 1328 aa19.47■□□□□ 0.71
Cln3-203ENSMUST00000098036 DroshaQ5HZJ0 1373 aaKnown RBP19.46■□□□□ 0.71
Cln3-203ENSMUST00000098036 Map4P27546 1125 aaKnown RBP19.45■□□□□ 0.7
Cln3-203ENSMUST00000098036 Pik3c2gO70167 1506 aa19.44■□□□□ 0.7
Cln3-203ENSMUST00000098036 PtprgQ05909 1442 aa19.44■□□□□ 0.7
Cln3-203ENSMUST00000098036 Rsph4aQ8BYM7 716 aa19.44■□□□□ 0.7
Cln3-203ENSMUST00000098036 Prex1Q69ZK0 1650 aa19.42■□□□□ 0.7
Cln3-203ENSMUST00000098036 Cyb5rlB1AS42 316 aa19.41■□□□□ 0.7
Cln3-203ENSMUST00000098036 Pde4cQ3UEI1 686 aa19.41■□□□□ 0.7
Cln3-203ENSMUST00000098036 Dip2bQ3UH60 1574 aa19.4■□□□□ 0.7
Cln3-203ENSMUST00000098036 Usp47Q8BY87 1376 aa19.4■□□□□ 0.7
Cln3-203ENSMUST00000098036 Knl1Q66JQ7 1612 aa19.39■□□□□ 0.69
Cln3-203ENSMUST00000098036 4930407I10RikD3Z5T8 1512 aa19.38■□□□□ 0.69
Cln3-203ENSMUST00000098036 Trak1Q6PD31 939 aa19.38■□□□□ 0.69
Cln3-203ENSMUST00000098036 Robo2Q7TPD3 1470 aa19.38■□□□□ 0.69
Cln3-203ENSMUST00000098036 Ahdc1Q6PAL7 1594 aaKnown RBP19.37■□□□□ 0.69
Cln3-203ENSMUST00000098036 Gm13697A2AK42 830 aa19.36■□□□□ 0.69
Cln3-203ENSMUST00000098036 Supt5hO55201 1082 aaKnown RBP19.36■□□□□ 0.69
Cln3-203ENSMUST00000098036 Pcgf6Q99NA9 353 aa19.36■□□□□ 0.69
Cln3-203ENSMUST00000098036 Aebp2Q9Z248 504 aaKnown RBP19.36■□□□□ 0.69
Cln3-203ENSMUST00000098036 Arhgap23Q69ZH9 1483 aa19.36■□□□□ 0.69
Cln3-203ENSMUST00000098036 Asxl1P59598 1514 aa19.35■□□□□ 0.69
Cln3-203ENSMUST00000098036 Adamts7Q68SA9 1657 aa19.34■□□□□ 0.69
Cln3-203ENSMUST00000098036 ClspnQ80YR7 1315 aa19.33■□□□□ 0.69
Cln3-203ENSMUST00000098036 Cd109Q8R422 1442 aa19.32■□□□□ 0.68
Cln3-203ENSMUST00000098036 Topaz1E5FYH1 1653 aa19.32■□□□□ 0.68
Cln3-203ENSMUST00000098036 Wdr66E9Q743 1299 aa19.32■□□□□ 0.68
Cln3-203ENSMUST00000098036 Dhx9O70133 1380 aaKnown RBP19.32■□□□□ 0.68
Cln3-203ENSMUST00000098036 Med14A2ABV5 1459 aaKnown RBP19.3■□□□□ 0.68
Cln3-203ENSMUST00000098036 Hfm1D3Z4R1 1434 aa19.3■□□□□ 0.68
Cln3-203ENSMUST00000098036 Nsd2Q8BVE8 1365 aa19.29■□□□□ 0.68
Cln3-203ENSMUST00000098036 Hdac5Q9Z2V6 1113 aa19.29■□□□□ 0.68
Cln3-203ENSMUST00000098036 Akap12Q9WTQ5 1684 aa19.27■□□□□ 0.68
Cln3-203ENSMUST00000098036 Tmem131lQ3U3D7 1597 aa19.27■□□□□ 0.68
Cln3-203ENSMUST00000098036 Abcc6Q9R1S7 1498 aa19.27■□□□□ 0.68
Cln3-203ENSMUST00000098036 Rock1P70335 1354 aa19.27■□□□□ 0.68
Cln3-203ENSMUST00000098036 Ercc6l2Q9JIM3 1537 aa19.27■□□□□ 0.68
Cln3-203ENSMUST00000098036 Myom3A2ABU4 1439 aa19.27■□□□□ 0.67
Cln3-203ENSMUST00000098036 Ylpm1Q9R0I7 1386 aaKnown RBP19.26■□□□□ 0.67
Cln3-203ENSMUST00000098036 Ppip5k1A2ARP1 1436 aa19.26■□□□□ 0.67
Cln3-203ENSMUST00000098036 Sall2Q9QX96 1004 aa19.25■□□□□ 0.67
Cln3-203ENSMUST00000098036 Dot1lQ6XZL8 1540 aa19.25■□□□□ 0.67
Cln3-203ENSMUST00000098036 Ttc21bQ0HA38 1315 aa19.25■□□□□ 0.67
Cln3-203ENSMUST00000098036 Atp7aQ64430 1491 aa19.24■□□□□ 0.67
Cln3-203ENSMUST00000098036 Bcl9Q9D219 1425 aa19.24■□□□□ 0.67
Cln3-203ENSMUST00000098036 AnkarA2RT91 1465 aa19.24■□□□□ 0.67
Cln3-203ENSMUST00000098036 Scn4aQ9ER60 1841 aa19.2■□□□□ 0.66
Cln3-203ENSMUST00000098036 Prdm2A2A7B5 1709 aaKnown RBP19.19■□□□□ 0.66
Cln3-203ENSMUST00000098036 Adgrb3Q80ZF8 1522 aa19.19■□□□□ 0.66
Cln3-203ENSMUST00000098036 Mbd5B1AYB6 1498 aa19.17■□□□□ 0.66
Cln3-203ENSMUST00000098036 Erich6D3Z6S9 713 aa19.17■□□□□ 0.66
Cln3-203ENSMUST00000098036 Ino80Q6ZPV2 1559 aa19.16■□□□□ 0.66
Cln3-203ENSMUST00000098036 Edc4Q3UJB9 1406 aaKnown RBP19.15■□□□□ 0.66
Cln3-203ENSMUST00000098036 Iqgap3F8VQ29 1632 aa19.15■□□□□ 0.66
Cln3-203ENSMUST00000098036 Tarbp1E9Q368 1579 aa19.15■□□□□ 0.66
Cln3-203ENSMUST00000098036 Dip2aQ8BWT5 1523 aa19.14■□□□□ 0.65
Cln3-203ENSMUST00000098036 Chd2E9PZM4 1827 aaKnown RBP19.14■□□□□ 0.65
Cln3-203ENSMUST00000098036 Rgl3Q3UYI5 709 aa19.14■□□□□ 0.65
Cln3-203ENSMUST00000098036 GphnQ8BUV3 769 aaKnown RBP19.13■□□□□ 0.65
Cln3-203ENSMUST00000098036 Kif13aQ9EQW7 1749 aa19.13■□□□□ 0.65
Cln3-203ENSMUST00000098036 Cpsf1Q9EPU4 1441 aaKnown RBP19.12■□□□□ 0.65
Cln3-203ENSMUST00000098036 Skint5A7XUY5 1461 aa19.12■□□□□ 0.65
Cln3-203ENSMUST00000098036 Ppargc1bQ8VHJ7 1014 aa19.11■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms