RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Inpp5dQ9ES52 1191 aa11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Fan1Q69ZT1 1020 aa11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Tpm3-rs7D3Z2H9 248 aa11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Tsen2Q6P7W5 460 aa11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Lemd3Q9WU40 921 aa11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Ush1cQ9ES64 910 aa11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Atp6v1dP57746 247 aa11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Mical1Q8VDP3 1048 aa11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Eif2s2Q99L45 331 aaKnown RBP11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Rfx1P48377 963 aa11.61□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Ccnb3Q810T2 1396 aa11.6□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Kif3bQ61771 747 aa11.6□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Nol10Q5RJG1 687 aaKnown RBP11.6□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 PrkcshO08795 521 aa11.6□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Psme1P97371 249 aa11.6□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Ak7Q9D2H2 614 aa11.6□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Ccdc60Q8C4J0 545 aa11.59□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Eif4g2Q62448 906 aaKnown RBP11.58□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Sf3a1Q8K4Z5 791 aaKnown RBP11.58□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Rock1P70335 1354 aa11.58□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Esx1O88933 382 aa11.58□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Txndc2Q6P902 515 aa11.58□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Sycp2Q9CUU3 1500 aa11.58□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Cspp1B2RX88 1205 aa11.57□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Casq1O09165 405 aa11.57□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Ccer1Q9CQL2 403 aa11.57□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Cgnl1Q6AW69 1298 aa11.56□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Slc4a10Q5DTL9 1118 aa11.56□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 MlecQ6ZQI3 291 aaKnown RBP11.56□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Chmp3Q9CQ10 224 aa11.56□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 UacaQ8CGB3 1411 aa11.56□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 CftrP26361 1476 aa11.56□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Filip1lQ6P6L0 1131 aa11.56□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 St18Q80TY4 1045 aa11.56□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 SetQ9EQU5 289 aaKnown RBP11.55□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Synj1Q8CHC4 1574 aa11.54□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 CenpjQ569L8 1344 aa11.54□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 IbspQ61711 324 aa11.54□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Ggt6Q6PDE7 497 aa11.54□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 GsdmaQ9EST1 446 aa11.54□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Q8BT18 775 aa11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 G3bp1P97855 465 aaKnown RBP11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Utp3Q9JI13 469 aaKnown RBP11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Dapk1Q80YE7 1442 aa11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Dhx57Q6P5D3 1388 aaKnown RBP11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Fbxo2Q80UW2 297 aa11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Stard8Q8K031 1019 aa11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Cc2d1aQ8K1A6 943 aa11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Pknox2Q8BG99 474 aa11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Kif7B7ZNG0 1348 aa11.53□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Samd1D3YXK1 519 aa11.52□□□□□ -0.56
Prpf40a-201ENSMUST00000076313 Tpd52l1O54818 204 aa11.52□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Sart1Q9Z315 806 aaKnown RBP11.52□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Tomm22Q9CPQ3 142 aa11.52□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Carmil1Q6EDY6 1374 aa11.52□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Znf710Q3U288 666 aa11.51□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Plcd4Q8K3R3 807 aa11.51□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Rabep1O35551 862 aa11.51□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Fam184bQ0KK56 942 aa11.51□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Nap1l3Q794H2 544 aa11.51□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Stk31Q99MW1 1018 aa11.5□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Rpgrip1lQ8CG73 1264 aa11.5□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Usp40Q8BWR4 1235 aa11.5□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Tpm3P21107 285 aaKnown RBP11.5□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Trim58Q5NCC9 485 aa11.5□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Polr3gQ6NXY9 223 aa11.5□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Glipr1l2Q9CQ35 332 aa11.5□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Ralbp1Q62172 648 aa11.5□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Utp14aQ640M1 767 aaKnown RBP11.49□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Chmp4cQ9D7F7 232 aa11.49□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Sh3bgrQ9WUZ7 214 aa11.49□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Map7d2A2AG50 781 aa11.49□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Zscan10Q3URR7 782 aa11.49□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 KarsQ99MN1 595 aaKnown RBP11.49□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Pak3Q61036 559 aa11.48□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Kif16bB1AVY7 1312 aa11.48□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Dnai2A2AC93 623 aa11.48□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Gripap1Q8VD04 806 aa11.48□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Pank1Q8K4K6 548 aa11.47□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Phactr2B1AVP0 632 aa11.47□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Ccdc30Q8BVF4 654 aa11.47□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Ttll13A4Q9F6 804 aa11.47□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Kif4P33174 1231 aa11.47□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Triml2E9PW10 424 aa11.47□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Prkrip1Q9CWV6 186 aaKnown RBP11.47□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Smarca2Q6DIC0 1577 aa11.46□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Drc7Q6V3W6 876 aa11.46□□□□□ -0.57
Prpf40a-201ENSMUST00000076313 Ubap1lG3UW59 384 aa11.46□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 BccipQ9CWI3 316 aa11.46□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Phldb1Q6PDH0 1371 aaKnown RBP11.45□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 KinQ8K339 391 aa11.45□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Ccdc183A2AJB1 534 aa11.45□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 AppP12023 770 aa11.44□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Taf3Q5HZG4 932 aa11.44□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Ccdc47Q9D024 483 aaKnown RBP11.44□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Cabp4Q8VHC5 271 aa11.44□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Gabpb2P81069 414 aa11.43□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Tceal9Q9DD24 104 aa11.43□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Pdcl3Q8BVF2 240 aa11.43□□□□□ -0.58
Prpf40a-201ENSMUST00000076313 Nectin2P32507 530 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 161.2 ms