RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Ccdc173A0JLY1 547 aa13.78□□□□□ -0.2
Rtn3-202ENSMUST00000065304 Cluap1Q8R3P7 413 aa13.78□□□□□ -0.2
Rtn3-202ENSMUST00000065304 Fam193aQ8CGI1 1231 aaKnown RBP13.76□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Chmp3Q9CQ10 224 aa13.76□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Pnmal2G3X9N3 661 aa13.76□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Utp3Q9JI13 469 aaKnown RBP13.76□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Ppm1eQ80TL0 749 aa13.75□□□□□ -0.21
Rtn3-202ENSMUST00000065304 EzrP26040 586 aaKnown RBP13.74□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Ddx11Q6AXC6 880 aa13.74□□□□□ -0.21
Rtn3-202ENSMUST00000065304 BbxQ8VBW5 907 aa13.74□□□□□ -0.21
Rtn3-202ENSMUST00000065304 U2af1Q9D883 239 aaKnown RBP13.74□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Mns1Q61884 491 aa13.73□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Rec8Q8C5S7 591 aa13.73□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Casq1O09165 405 aa13.72□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Mre11Q61216 706 aa13.72□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Q8BT18 775 aa13.72□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Kif4P33174 1231 aa13.72□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Gripap1Q8VD04 806 aa13.72□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Golga2Q921M4 999 aa13.72□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Mia2Q91ZV0 1396 aa13.71□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Trim55G3X8Y1 545 aa13.71□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Ccar1Q8CH18 1146 aaKnown RBP13.71□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Mrvi1Q9WUX5 899 aaKnown RBP13.71□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Stk24Q99KH8 431 aa13.71□□□□□ -0.21
Rtn3-202ENSMUST00000065304 Mtus2Q3UHD3 1353 aa13.71□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Tmf1B9EKI3 1091 aa13.7□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Pdcl3Q8BVF2 240 aa13.7□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Cplx1P63040 134 aa13.7□□□□□ -0.22
Rtn3-202ENSMUST00000065304 KinQ8K339 391 aa13.7□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Dhx8A2A4P0 1244 aaKnown RBP13.69□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Bicd2Q921C5 820 aa13.69□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Cnga1P29974 684 aa13.69□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Gbp4Q61107 620 aa13.69□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Rrp7aQ9D1C9 280 aaKnown RBP13.69□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Ylpm1Q9R0I7 1386 aaKnown RBP13.69□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Spata24Q6P926 205 aa13.68□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Dixdc1Q80Y83 711 aa13.68□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Ercc6F8VPZ5 1481 aa13.68□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Smc4Q8CG47 1286 aa13.68□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Ak7Q9D2H2 614 aa13.68□□□□□ -0.22
Rtn3-202ENSMUST00000065304 March6Q6ZQ89 909 aa13.67□□□□□ -0.22
Rtn3-202ENSMUST00000065304 AampJ3QN89 436 aa13.67□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Lrrcc1Q69ZB0 1026 aa13.66□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Erlin2Q8BFZ9 340 aa13.66□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Tmco3Q8BH01 678 aa13.66□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Ubxn4Q8VCH8 506 aa13.65□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Rnf20Q5DTM8 973 aa13.65□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Gtf2e1Q9D0D5 440 aa13.65□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Tnnt1O88346 262 aa13.65□□□□□ -0.22
Rtn3-202ENSMUST00000065304 Nap1l1P28656 391 aaKnown RBP13.64□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Gpatch3Q8BIY1 525 aa13.64□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Trim29Q8R2Q0 587 aa13.64□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Rsph6aQ8CDR2 708 aa13.64□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Paf1Q8K2T8 535 aa13.64□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Ggt6Q6PDE7 497 aa13.63□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Mex3cQ05A36 652 aaKnown RBP13.63□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Znf330Q922H9 316 aa13.63□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Sycp1Q62209 993 aa13.63□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Rabep1O35551 862 aa13.62□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Arglu1Q3UL36 271 aaKnown RBP13.62□□□□□ -0.23
Rtn3-202ENSMUST00000065304 IbspQ61711 324 aa13.62□□□□□ -0.23
Rtn3-202ENSMUST00000065304 AppP12023 770 aa13.62□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Ccdc146E9Q9F7 977 aa13.62□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Map9Q3TRR0 646 aa13.61□□□□□ -0.23
Rtn3-202ENSMUST00000065304 MyclP10166 368 aa13.61□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Chmp4cQ9D7F7 232 aa13.61□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Ksr2Q3UVC0 959 aa13.61□□□□□ -0.23
Rtn3-202ENSMUST00000065304 UvssaQ9D479 717 aa13.61□□□□□ -0.23
Rtn3-202ENSMUST00000065304 A0A0U1RNP2 1173 aa13.6□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Cdkn1cP49919 348 aa13.6□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Exoc6Q8R313 802 aa13.6□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Kif7B7ZNG0 1348 aa13.6□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Polr3gQ6NXY9 223 aa13.6□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Ncbp3Q8BZR9 615 aaKnown RBP13.6□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Rrp9Q91WM3 475 aaKnown RBP13.6□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Luc7lQ9CYI4 371 aaKnown RBP13.6□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Eea1Q8BL66 1411 aa13.59□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Kiaa0753Q6A000 959 aa13.59□□□□□ -0.23
Rtn3-202ENSMUST00000065304 OptnQ8K3K8 584 aa13.59□□□□□ -0.23
Rtn3-202ENSMUST00000065304 Pip4k2aO70172 405 aa13.58□□□□□ -0.23
Rtn3-202ENSMUST00000065304 ChgaP26339 463 aaKnown RBP13.58□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Plin1Q8CGN5 517 aa13.58□□□□□ -0.24
Rtn3-202ENSMUST00000065304 PhaxQ9JJT9 385 aaKnown RBP13.58□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Commd10Q8JZY2 202 aa13.58□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Tmx4Q8C0L0 335 aa13.58□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Smc2Q8CG48 1191 aaKnown RBP13.58□□□□□ -0.24
Rtn3-202ENSMUST00000065304 TxlnbQ8VBT1 685 aa13.58□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Ppp4r3bQ922R5 820 aa13.58□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Smc3Q9CW03 1217 aaKnown RBP13.58□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Slc4a10Q5DTL9 1118 aa13.57□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Samd1D3YXK1 519 aa13.57□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Birc3O08863 600 aa13.57□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Cep112Q5PR68 954 aa13.57□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Rundc1Q0VDN7 615 aa13.56□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Ccar2Q8VDP4 922 aaKnown RBP13.56□□□□□ -0.24
Rtn3-202ENSMUST00000065304 CntlnA2AM05 1397 aa13.56□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Fam43aQ8BUP8 424 aa13.56□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Fam13bQ8K2H3 851 aa13.56□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Cchcr1Q8K2I2 770 aa13.55□□□□□ -0.24
Rtn3-202ENSMUST00000065304 Nat10Q8K224 1024 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms