RNA–Protein interactions for RNA: ENSMUST00000063006.11

Ccdc42-201, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 5 BASIC

Gene Ccdc42, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-201ENSMUST00000063006 Gm32742A0A1B0GT42 1604 aa13.36□□□□□ -0.27
Ccdc42-201ENSMUST00000063006 Abca6Q8K441 1624 aa13.35□□□□□ -0.27
Ccdc42-201ENSMUST00000063006 Abcc3B2RX12 1523 aa13.34□□□□□ -0.27
Ccdc42-201ENSMUST00000063006 4930407I10RikD3Z5T8 1512 aa13.34□□□□□ -0.27
Ccdc42-201ENSMUST00000063006 Dip2aQ8BWT5 1523 aa13.34□□□□□ -0.27
Ccdc42-201ENSMUST00000063006 Cdc42bpbQ7TT50 1713 aa13.33□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Adcy10Q8C0T9 1614 aa13.32□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Topaz1E5FYH1 1653 aa13.32□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Arhgef40Q3UPH7 1517 aa13.31□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Cabp1Q9JLK7 227 aa13.31□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Hecw1Q8K4P8 1604 aa13.31□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Myom2Q14BI5 1463 aa13.3□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Talpid3E9PV87 1520 aa13.3□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 ClspnQ80YR7 1315 aa13.3□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Tdrd9Q14BI7 1383 aa13.3□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Dip2bQ3UH60 1574 aa13.29□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Afap1Q80YS6 731 aa13.29□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Cfap74Q3UY96 1578 aa13.28□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Kdm3bQ6ZPY7 1562 aa13.28□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Dennd4bQ3U1Y4 1499 aa13.28□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Trpm1Q2TV84 1622 aa13.28□□□□□ -0.28
Ccdc42-201ENSMUST00000063006 Supt5hO55201 1082 aaKnown RBP13.27□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Ecm2Q5FW85 670 aa13.27□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Chic2Q9D9G3 165 aa13.27□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 DroshaQ5HZJ0 1373 aaKnown RBP13.27□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Ltbp4Q8K4G1 1666 aa13.26□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Adgrl2Q8JZZ7 1487 aa13.25□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Pip4k2bQ80XI4 416 aa13.25□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Clstn2Q9ER65 966 aa13.25□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Mphosph9A6H5Y1 991 aa13.24□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Sart1Q9Z315 806 aaKnown RBP13.24□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Eid3Q3V124 375 aa13.23□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Ppargc1bQ8VHJ7 1014 aa13.23□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Hs6st3Q9QYK4 470 aa13.23□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 CltcQ68FD5 1675 aaKnown RBP13.23□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Lamc1P02468 1607 aaKnown RBP13.23□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Cdc42bpgQ80UW5 1551 aa13.23□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Ppp4r2Q0VGB7 417 aa13.22□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Cypt1Q8CH20 168 aa13.22□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Hdac5Q9Z2V6 1113 aa13.22□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Map3k5O35099 1380 aa13.21□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 Prdm16A2A935 1275 aa13.21□□□□□ -0.29
Ccdc42-201ENSMUST00000063006 RictorQ6QI06 1708 aa13.21□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Fmn2Q9JL04 1578 aa13.2□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Mast1Q9R1L5 1570 aa13.2□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Wdr66E9Q743 1299 aa13.18□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Xrn1P97789 1719 aaKnown RBP13.18□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Trpm2Q91YD4 1506 aa13.18□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Naip6Q9JIB6 1403 aa13.16□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Nos1Q9Z0J4 1429 aa13.16□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 GapdhsQ64467 440 aa13.16□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Sall2Q9QX96 1004 aa13.16□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Gli2Q0VGT2 1544 aa13.16□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Knl1Q66JQ7 1612 aa13.16□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Aebp2Q9Z248 504 aaKnown RBP13.15□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Rprd2Q6NXI6 1469 aaKnown RBP13.15□□□□□ -0.3
Ccdc42-201ENSMUST00000063006 Ncoa1P70365 1447 aa13.14□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Gm13697A2AK42 830 aa13.14□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Hspa5P20029 655 aaKnown RBP13.14□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Naip5Q9R016 1403 aa13.13□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 AlkP97793 1621 aa13.13□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Adgrb2Q8CGM1 1561 aa13.13□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Bcl9Q9D219 1425 aa13.13□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Nup155Q99P88 1391 aaKnown RBP13.12□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Pkd2O35245 966 aa13.12□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Pik3c2gO70167 1506 aa13.12□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Phlpp1Q8CHE4 1687 aa13.12□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Gli3Q61602 1583 aa13.11□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Kif21bQ9QXL1 1668 aa13.11□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Rimbp3Q3V0F0 1606 aa13.09□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 Arhgap23Q69ZH9 1483 aa13.09□□□□□ -0.31
Ccdc42-201ENSMUST00000063006 PtprgQ05909 1442 aa13.08□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Znf518aB2RRF6 1478 aaKnown RBP13.08□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Hspa1lP16627 641 aa13.07□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Map4P27546 1125 aaKnown RBP13.07□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Med14A2ABV5 1459 aaKnown RBP13.07□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Usp47Q8BY87 1376 aa13.07□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Slc4a1apE9PX68 744 aa13.06□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Rrp7aQ9D1C9 280 aaKnown RBP13.06□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 CatipB9EKE5 520 aa13.05□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Uggt2E9Q4X2 1504 aa13.04□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Zfp644E9QA22 1323 aa13.04□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Ttll5Q8CHB8 1328 aa13.04□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Kif3bQ61771 747 aa13.03□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Rock1P70335 1354 aa13.03□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Ssh2Q5SW75 1423 aa13.03□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Scaf11E9PZM7 1456 aaKnown RBP13.03□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Topbp1Q6ZQF0 1515 aa13.03□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Abca17E9PX95 1733 aa13.02□□□□□ -0.32
Ccdc42-201ENSMUST00000063006 Spag9Q58A65 1321 aaKnown RBP13.02□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 Trak1Q6PD31 939 aa13.01□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 Ppip5k1A2ARP1 1436 aa13.01□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 Iqsec2Q5DU25 1478 aa13□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 Nsd2Q8BVE8 1365 aa12.99□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 Cwc22Q8C5N3 908 aaKnown RBP12.99□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 GphnQ8BUV3 769 aaKnown RBP12.98□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 Rims2Q9EQZ7 1530 aa12.97□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 Chd2E9PZM4 1827 aaKnown RBP12.97□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 Robo2Q7TPD3 1470 aa12.97□□□□□ -0.33
Ccdc42-201ENSMUST00000063006 Abcc6Q9R1S7 1498 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms