RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Abcc1O35379 1528 aa23.34■■□□□ 1.33
Ddx28-201ENSMUST00000058579 Rock2P70336 1388 aa23.31■■□□□ 1.32
Ddx28-201ENSMUST00000058579 Cpsf1Q9EPU4 1441 aaKnown RBP23.31■■□□□ 1.32
Ddx28-201ENSMUST00000058579 Fam208aQ69ZR9 1610 aaKnown RBP23.28■■□□□ 1.32
Ddx28-201ENSMUST00000058579 Fmn2Q9JL04 1578 aa23.28■■□□□ 1.32
Ddx28-201ENSMUST00000058579 Liat1Q810M6 228 aa23.28■■□□□ 1.32
Ddx28-201ENSMUST00000058579 Polr3aB2RXC6 1390 aa23.27■■□□□ 1.32
Ddx28-201ENSMUST00000058579 L3mbtl2P59178 703 aa23.26■■□□□ 1.31
Ddx28-201ENSMUST00000058579 Dot1lQ6XZL8 1540 aa23.25■■□□□ 1.31
Ddx28-201ENSMUST00000058579 Asxl1P59598 1514 aa23.24■■□□□ 1.31
Ddx28-201ENSMUST00000058579 Iqgap1Q9JKF1 1657 aaKnown RBP23.23■■□□□ 1.31
Ddx28-201ENSMUST00000058579 PtprgQ05909 1442 aa23.23■■□□□ 1.31
Ddx28-201ENSMUST00000058579 Pak3Q61036 559 aa23.22■■□□□ 1.31
Ddx28-201ENSMUST00000058579 Rock1P70335 1354 aa23.21■■□□□ 1.31
Ddx28-201ENSMUST00000058579 Adgrl2Q8JZZ7 1487 aa23.21■■□□□ 1.31
Ddx28-201ENSMUST00000058579 Lrrc9Q8CDN9 1456 aa23.2■■□□□ 1.3
Ddx28-201ENSMUST00000058579 NhsB1AV60 1647 aa23.19■■□□□ 1.3
Ddx28-201ENSMUST00000058579 Clstn2Q9ER65 966 aa23.18■■□□□ 1.3
Ddx28-201ENSMUST00000058579 Arhgap5P97393 1501 aa23.17■■□□□ 1.3
Ddx28-201ENSMUST00000058579 Ssh2Q5SW75 1423 aa23.16■■□□□ 1.3
Ddx28-201ENSMUST00000058579 Slc4a3P16283 1227 aa23.16■■□□□ 1.3
Ddx28-201ENSMUST00000058579 Rpgrip1lQ8CG73 1264 aa23.15■■□□□ 1.3
Ddx28-201ENSMUST00000058579 Zbtb7cQ8VCZ7 619 aa23.15■■□□□ 1.3
Ddx28-201ENSMUST00000058579 Rnf17Q99MV7 1640 aa23.14■■□□□ 1.3
Ddx28-201ENSMUST00000058579 Rrp7aQ9D1C9 280 aaKnown RBP23.14■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Kiaa1210E9Q0C6 1637 aa23.13■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Gapvd1Q6PAR5 1458 aa23.13■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Egfem1Q8C088 590 aa23.12■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Anp32bQ9EST5 272 aaKnown RBP23.12■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Kcnh8P59111 1102 aa23.12■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Kank1E9Q238 1360 aa23.11■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Setd1aE9PYH6 1716 aa23.1■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Bcl11aQ9QYE3 773 aa23.1■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Gm32742A0A1B0GT42 1604 aa23.1■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Zscan21Q07231 555 aa23.1■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Cd109Q8R422 1442 aa23.09■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Tcerg1Q8CGF7 1100 aaKnown RBP23.09■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Ifnlr1Q8CGK5 535 aa23.09■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Kdm5cP41230 1554 aa23.09■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Trappc8E9PWG2 1437 aa23.09■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Tubgcp6G5E8P0 1769 aa23.08■■□□□ 1.29
Ddx28-201ENSMUST00000058579 Ythdc2B2RR83 1445 aaKnown RBP23.08■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Atp10dQ8K2X1 1416 aa23.08■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Atp7aQ64430 1491 aa23.07■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Erbb3Q61526 1339 aa23.07■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Pdcd11Q6NS46 1862 aaKnown RBP23.07■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Abca8bQ8K440 1620 aa23.06■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Ttbk1Q6PCN3 1308 aa23.05■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Mast1Q9R1L5 1570 aa23.05■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Zbtb4Q5F293 982 aa23.05■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Mak16Q8BGS0 296 aaKnown RBP23.05■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Zfp444Q3TDV8 331 aaKnown RBP23.04■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Sart1Q9Z315 806 aaKnown RBP23.03■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Znf608Q56A10 1511 aa23.03■■□□□ 1.28
Ddx28-201ENSMUST00000058579 DiexfQ8BTT6 772 aaKnown RBP23.03■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Upf2A2AT37 1269 aaKnown RBP23.02■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Q7TT23 1179 aa23.02■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Cfap74Q3UY96 1578 aa23.02■■□□□ 1.28
Ddx28-201ENSMUST00000058579 Tarbp1E9Q368 1579 aa23.02■■□□□ 1.27
Ddx28-201ENSMUST00000058579 Igf1rQ60751 1373 aa23.01■■□□□ 1.27
Ddx28-201ENSMUST00000058579 Neurl4Q5NCX5 1563 aa23■■□□□ 1.27
Ddx28-201ENSMUST00000058579 Mink1Q9JM52 1308 aa23■■□□□ 1.27
Ddx28-201ENSMUST00000058579 Ifit1bl1D3Z6F0 470 aa22.99■■□□□ 1.27
Ddx28-201ENSMUST00000058579 PtprtQ99M80 1454 aa22.99■■□□□ 1.27
Ddx28-201ENSMUST00000058579 Ppip5k1A2ARP1 1436 aa22.99■■□□□ 1.27
Ddx28-201ENSMUST00000058579 Pank3Q8R2W9 370 aa22.98■■□□□ 1.27
Ddx28-201ENSMUST00000058579 PrxO55103 1391 aa22.96■■□□□ 1.27
Ddx28-201ENSMUST00000058579 Ipo9Q91YE6 1041 aa22.94■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Zmym4A2A791 1549 aaKnown RBP22.94■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Abcc3B2RX12 1523 aa22.94■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Cdc42bpbQ7TT50 1713 aa22.94■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Inpp5dQ9ES52 1191 aa22.93■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Adamts13Q769J6 1426 aa22.93■■□□□ 1.26
Ddx28-201ENSMUST00000058579 NeflP08551 543 aa22.92■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Hecw1Q8K4P8 1604 aa22.92■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Rad21Q61550 635 aaKnown RBP22.92■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Spag9Q58A65 1321 aaKnown RBP22.91■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Pabpn1Q8CCS6 302 aaKnown RBP22.91■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Prkrip1Q9CWV6 186 aaKnown RBP22.9■■□□□ 1.26
Ddx28-201ENSMUST00000058579 Plch2A2AP18 1501 aa22.89■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Zscan10Q3URR7 782 aa22.89■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Mroh3A0A1D5RM54 893 aa22.88■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Prdm16A2A935 1275 aa22.87■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Pde4cQ3UEI1 686 aa22.87■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Kidins220E9Q9B7 1793 aa22.87■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Arid3cA6PWV5 409 aa22.87■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Tmf1B9EKI3 1091 aa22.87■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Arid4bA2CG63 1314 aaKnown RBP22.86■■□□□ 1.25
Ddx28-201ENSMUST00000058579 AI481877A2ALV5 1481 aa22.86■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Edc4Q3UJB9 1406 aaKnown RBP22.86■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Cep170Q6A065 1588 aa22.85■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Tex14Q7M6U3 1450 aa22.85■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Robo2Q7TPD3 1470 aa22.85■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Hdac5Q9Z2V6 1113 aa22.84■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Ccdc27Q3V036 639 aa22.84■■□□□ 1.25
Ddx28-201ENSMUST00000058579 TnikP83510 1323 aa22.83■■□□□ 1.25
Ddx28-201ENSMUST00000058579 Sbno1Q689Z5 1390 aa22.81■■□□□ 1.24
Ddx28-201ENSMUST00000058579 Map3k5O35099 1380 aa22.81■■□□□ 1.24
Ddx28-201ENSMUST00000058579 Tulp4Q9JIL5 1547 aa22.8■■□□□ 1.24
Ddx28-201ENSMUST00000058579 Esx1O88933 382 aa22.8■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms