RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Rangap1P46061 589 aaKnown RBP11.88□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Mroh2bQ7M6Y6 1581 aa11.88□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Mroh3A0A1D5RM54 893 aa11.88□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Gm7298A0A0N4SVU1 1476 aa11.87□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Znf771Q8BJ90 317 aa11.86□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Apbb1Q9QXJ1 710 aa11.86□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Clip1Q922J3 1391 aa11.86□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Chmp5Q9D7S9 219 aa11.86□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Eif2s2Q99L45 331 aaKnown RBP11.84□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Dhx30Q99PU8 1217 aaKnown RBP11.84□□□□□ -0.51
Ctc1-201ENSMUST00000021278 AI481877A2ALV5 1481 aa11.84□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Ush1cQ9ES64 910 aa11.84□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Erich6D3Z6S9 713 aa11.83□□□□□ -0.52
Ctc1-201ENSMUST00000021278 PogkQ80TC5 607 aa11.83□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Gpatch11Q3UFS4 262 aa11.82□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Map7d2A2AG50 781 aa11.82□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Abcc2Q8VI47 1543 aa11.82□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Lmod2Q3UHZ5 550 aa11.82□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Erich4Q3UNU4 136 aa11.82□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Mrvi1Q9WUX5 899 aaKnown RBP11.82□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Becn1O88597 448 aa11.81□□□□□ -0.52
Ctc1-201ENSMUST00000021278 EspnQ9ET47 871 aa11.81□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Dnmt1P13864 1620 aaKnown RBP11.81□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Kiaa0754Q69ZZ9 979 aa11.81□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Pprc1Q6NZN1 1644 aa11.81□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Cbx1P83917 185 aaKnown RBP11.81□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Chd1P40201 1711 aa11.81□□□□□ -0.52
Ctc1-201ENSMUST00000021278 MpndQ3TV65 487 aa11.8□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Abca16E9PWJ7 1678 aa11.8□□□□□ -0.52
Ctc1-201ENSMUST00000021278 BC005561E9Q5E2 1589 aa11.8□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Sparcl1P70663 650 aa11.8□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Tex2Q6ZPJ0 1128 aaKnown RBP11.8□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Polr3glQ8R0C0 218 aa11.8□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Cyb5rlB1AS42 316 aa11.79□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Ak9G3UYQ4 1894 aa11.78□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Chmp4cQ9D7F7 232 aa11.78□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Igf1rQ60751 1373 aa11.77□□□□□ -0.52
Ctc1-201ENSMUST00000021278 MyclP10166 368 aa11.77□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Map3k4O08648 1597 aa11.77□□□□□ -0.52
Ctc1-201ENSMUST00000021278 Arhgap31A6X8Z5 1425 aa11.77□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Arhgef12Q8R4H2 1543 aaKnown RBP11.76□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Kif20aP97329 887 aa11.76□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Znf526Q8BI66 675 aa11.76□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Rsph4aQ8BYM7 716 aa11.76□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Arhgap35Q91YM2 1499 aa11.76□□□□□ -0.53
Ctc1-201ENSMUST00000021278 PtmsQ9D0J8 101 aaKnown RBP11.76□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Ubap1lG3UW59 384 aa11.75□□□□□ -0.53
Ctc1-201ENSMUST00000021278 NudcO35685 332 aaKnown RBP11.75□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Slx4Q6P1D7 1565 aa11.75□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Adamts12Q811B3 1600 aa11.75□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Dnajc5gQ8C632 165 aa11.75□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Exoc6Q8R313 802 aa11.75□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Depdc5P61460 1591 aa11.74□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Eif4g1Q6NZJ6 1600 aaKnown RBP11.74□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Znf608Q56A10 1511 aa11.74□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Ipo8Q7TMY7 1010 aa11.74□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Irf5P56477 497 aa11.73□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Setbp1Q9Z180 1582 aa11.73□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Cep162Q6ZQ06 1403 aa11.72□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Kcnj4P52189 445 aa11.72□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Kif27Q7M6Z4 1394 aa11.72□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Ttll13A4Q9F6 804 aa11.72□□□□□ -0.53
Ctc1-201ENSMUST00000021278 Fam114a1Q9D281 569 aa11.7□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Setd5Q5XJV7 1441 aa11.69□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Fyco1Q8VDC1 1437 aa11.69□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Plin1Q8CGN5 517 aa11.69□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Atp10dQ8K2X1 1416 aa11.69□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Cux1P53564 1515 aa11.69□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Gm13697A2AK42 830 aa11.68□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Polr1aO35134 1717 aaKnown RBP11.68□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Ube2q2Q8K2Z8 378 aa11.68□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Wdr7Q920I9 1489 aa11.67□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Trim30aP15533 496 aa11.67□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Nom1Q3UFM5 854 aaKnown RBP11.67□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Gys2Q8VCB3 704 aa11.67□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Ccdc141E9Q8Q6 1531 aa11.67□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Map3k1P53349 1493 aa11.67□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Ak7Q9D2H2 614 aa11.66□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Mia2Q91ZV0 1396 aa11.65□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Hspa5P20029 655 aaKnown RBP11.65□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Lrrc9Q8CDN9 1456 aa11.65□□□□□ -0.54
Ctc1-201ENSMUST00000021278 Tnnt1O88346 262 aa11.64□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Smg6P61406 1418 aaKnown RBP11.63□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Fndc1E9Q043 1732 aa11.62□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Lekr1B2RVN1 116 aa11.62□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Clasp1Q80TV8 1535 aaKnown RBP11.62□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Gse1Q3U3C9 1213 aa11.62□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Gpatch8A2A6A1 1505 aa11.61□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Kdm5bQ80Y84 1544 aa11.6□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Adam1bQ8R534 806 aa11.6□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Zfyve16Q80U44 1528 aa11.6□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Tomm22Q9CPQ3 142 aa11.6□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Lemd3Q9WU40 921 aa11.6□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Pnmal2G3X9N3 661 aa11.59□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Paf1Q8K2T8 535 aa11.59□□□□□ -0.55
Ctc1-201ENSMUST00000021278 Kiaa0753Q6A000 959 aa11.58□□□□□ -0.56
Ctc1-201ENSMUST00000021278 A2mQ6GQT1 1474 aa11.58□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Abca5Q8K448 1642 aa11.58□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Anapc15-psA0A140T8L6 141 aa11.58□□□□□ -0.56
Ctc1-201ENSMUST00000021278 Clcn1Q64347 994 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms