RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 AlkP97793 1621 aa13.05□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Kdm3bQ6ZPY7 1562 aa13.05□□□□□ -0.32
Nedd1-201ENSMUST00000020163 EspnQ9ET47 871 aa13.05□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Gapvd1Q6PAR5 1458 aa13.04□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Pabpn1Q8CCS6 302 aaKnown RBP13.04□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Rusc2Q80U22 1514 aa13.02□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Il16O54824 1322 aa13.02□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Cpsf1Q9EPU4 1441 aaKnown RBP13.02□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Dhx9O70133 1380 aaKnown RBP13.01□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Cdk13Q69ZA1 1511 aaKnown RBP13.01□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Rgl3Q3UYI5 709 aa13.01□□□□□ -0.33
Nedd1-201ENSMUST00000020163 CadpsQ80TJ1 1355 aa13.01□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Arhgef40Q3UPH7 1517 aa13.01□□□□□ -0.33
Nedd1-201ENSMUST00000020163 AU015836B2RUM3 263 aa13.01□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Setd1aE9PYH6 1716 aa13□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Mroh3A0A1D5RM54 893 aa13□□□□□ -0.33
Nedd1-201ENSMUST00000020163 B4galnt3Q6L8S8 986 aa13□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Supt6hQ62383 1726 aaKnown RBP13□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Kdm6bQ5NCY0 1641 aa12.99□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Wdr7Q920I9 1489 aa12.99□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Clasp1Q80TV8 1535 aaKnown RBP12.99□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Tmc1Q8R4P5 757 aa12.99□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Rad54l2Q99NG0 1466 aa12.98□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Arid4bA2CG63 1314 aaKnown RBP12.98□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Rrp9Q91WM3 475 aaKnown RBP12.97□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Col17a1Q07563 1470 aa12.97□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Iqgap1Q9JKF1 1657 aaKnown RBP12.97□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Gm14025A2AP89 1413 aa12.97□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Chmp5Q9D7S9 219 aa12.97□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Kdm5cP41230 1554 aa12.96□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Adgrb2Q8CGM1 1561 aa12.96□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Asxl1P59598 1514 aa12.96□□□□□ -0.33
Nedd1-201ENSMUST00000020163 Q7TT23 1179 aa12.96□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Pla2r1Q62028 1487 aa12.95□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Smc5Q8CG46 1101 aaKnown RBP12.95□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Polr3aB2RXC6 1390 aa12.95□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Plch2A2AP18 1501 aa12.95□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Trpm2Q91YD4 1506 aa12.95□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Cc2d2bA0A286YDU8 1405 aa12.94□□□□□ -0.34
Nedd1-201ENSMUST00000020163 4933402E13RikQ9D4D2 429 aa12.94□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Mapk8ip3Q9ESN9 1337 aa12.93□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Rad21Q61550 635 aaKnown RBP12.93□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Ttll5Q8CHB8 1328 aa12.93□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Tex14Q7M6U3 1450 aa12.93□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Adcy10Q8C0T9 1614 aa12.92□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Ppp1r9bQ6R891 817 aaKnown RBP12.92□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Nup160Q9Z0W3 1402 aaKnown RBP12.92□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Pbrm1Q8BSQ9 1634 aaKnown RBP12.92□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Rwdd1Q9CQK7 243 aa12.92□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Ncoa3O09000 1398 aa12.92□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Soga1E1U8D0 1418 aa12.92□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Ipo8Q7TMY7 1010 aa12.91□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Htatsf1Q8BGC0 757 aa12.91□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Dbr1Q923B1 550 aa12.91□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Rock1P70335 1354 aa12.91□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Plekhh1Q80TI1 1356 aa12.91□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Kif16bB1AVY7 1312 aa12.91□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Kif20aP97329 887 aa12.91□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Phf14Q9D4H9 881 aa12.91□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Adamts12Q811B3 1600 aa12.9□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Eif2s2Q99L45 331 aaKnown RBP12.9□□□□□ -0.34
Nedd1-201ENSMUST00000020163 Tarbp1E9Q368 1579 aa12.89□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Cdc42bpaQ3UU96 1719 aa12.89□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Trak1Q6PD31 939 aa12.88□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Grwd1Q810D6 446 aaKnown RBP12.88□□□□□ -0.35
Nedd1-201ENSMUST00000020163 AampJ3QN89 436 aa12.88□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Rrbp1Q99PL5 1605 aaKnown RBP12.88□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Ak7Q9D2H2 614 aa12.88□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Rapgef6Q5NCJ1 1609 aa12.87□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Dot1lQ6XZL8 1540 aa12.87□□□□□ -0.35
Nedd1-201ENSMUST00000020163 WizO88286 1684 aaKnown RBP12.87□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Zcchc11B2RX14 1644 aaKnown RBP12.87□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Magi3Q9EQJ9 1476 aa12.87□□□□□ -0.35
Nedd1-201ENSMUST00000020163 DmtnQ9WV69 405 aa12.86□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Hsp90ab1P11499 724 aaKnown RBP12.85□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Kiaa1551Q5DTW7 1521 aa12.85□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Ccdc141E9Q8Q6 1531 aa12.84□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Ccdc183A2AJB1 534 aa12.84□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Esx1O88933 382 aa12.84□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Arhgef11Q68FM7 1552 aa12.84□□□□□ -0.35
Nedd1-201ENSMUST00000020163 PrxO55103 1391 aa12.84□□□□□ -0.35
Nedd1-201ENSMUST00000020163 Trim30dE9PWL0 497 aa12.83□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Dnttip2Q8R2M2 758 aaKnown RBP12.83□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Nup155Q99P88 1391 aaKnown RBP12.83□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Dcaf11Q91VU6 549 aa12.83□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Arhgap31A6X8Z5 1425 aa12.83□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Atf7ipQ7TT18 1306 aa12.82□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Pank3Q8R2W9 370 aa12.82□□□□□ -0.36
Nedd1-201ENSMUST00000020163 CrbnQ8C7D2 445 aa12.81□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Grin2aP35436 1464 aa12.81□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Fgd6Q69ZL1 1399 aa12.81□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Antxr1Q9CZ52 562 aa12.8□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Zscan10Q3URR7 782 aa12.79□□□□□ -0.36
Nedd1-201ENSMUST00000020163 PtprgQ05909 1442 aa12.79□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Rtn4Q99P72 1162 aaKnown RBP12.79□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Inpp5dQ9ES52 1191 aa12.79□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Sbno1Q689Z5 1390 aa12.79□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Sptbn5F6UCX4 1208 aa12.78□□□□□ -0.36
Nedd1-201ENSMUST00000020163 Setd1bQ8CFT2 1985 aa12.78□□□□□ -0.36
Nedd1-201ENSMUST00000020163 WrnO09053 1401 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms