RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W RDL1Q12305 139 aaKnown RBP5.98□□□□□ -1.45
CIT3YPR001W NCA2Q12374 616 aa5.98□□□□□ -1.45
CIT3YPR001W YKL183C-AQ3E765 70 aa5.98□□□□□ -1.45
CIT3YPR001W POX1P13711 748 aa5.97□□□□□ -1.45
CIT3YPR001W PTP1P25044 335 aa5.97□□□□□ -1.45
CIT3YPR001W ZRT1P32804 376 aa5.97□□□□□ -1.45
CIT3YPR001W PDR3P33200 976 aa5.97□□□□□ -1.45
CIT3YPR001W YNK1P36010 153 aaKnown RBP5.97□□□□□ -1.45
CIT3YPR001W DTR1P38125 572 aa5.97□□□□□ -1.45
CIT3YPR001W DDI1P40087 428 aa5.97□□□□□ -1.45
CIT3YPR001W SIM1P40472 476 aa5.97□□□□□ -1.45
CIT3YPR001W ERG10P41338 398 aaKnown RBP5.97□□□□□ -1.45
CIT3YPR001W YGR067CP53243 804 aa5.97□□□□□ -1.45
CIT3YPR001W CAF40P53829 373 aa5.97□□□□□ -1.45
CIT3YPR001W CSM3Q04659 317 aa5.97□□□□□ -1.45
CIT3YPR001W RPL35AP0CX84 120 aaKnown RBP5.96□□□□□ -1.45
CIT3YPR001W RPL35BP0CX85 120 aaKnown RBP5.96□□□□□ -1.45
CIT3YPR001W EXO70P19658 623 aa5.96□□□□□ -1.45
CIT3YPR001W YMR31P19955 123 aa5.96□□□□□ -1.45
CIT3YPR001W MBR1P23493 339 aa5.96□□□□□ -1.45
CIT3YPR001W MKK1P32490 508 aa5.96□□□□□ -1.45
CIT3YPR001W VPS21P36017 210 aaKnown RBP5.96□□□□□ -1.45
CIT3YPR001W MCR1P36060 302 aaKnown RBP5.96□□□□□ -1.45
CIT3YPR001W YNL194CP40169 301 aa5.96□□□□□ -1.45
CIT3YPR001W TAD2P47058 250 aa5.96□□□□□ -1.45
CIT3YPR001W LSG1P53145 640 aaKnown RBP5.96□□□□□ -1.45
CIT3YPR001W SLI1P53304 468 aa5.96□□□□□ -1.45
CIT3YPR001W MTQ1P53944 314 aa5.96□□□□□ -1.45
CIT3YPR001W IRC4Q03036 179 aa5.96□□□□□ -1.45
CIT3YPR001W CTL1Q03220 320 aaKnown RBP5.96□□□□□ -1.45
CIT3YPR001W ASR1Q06834 288 aa5.96□□□□□ -1.45
CIT3YPR001W TLG2Q08144 397 aa5.96□□□□□ -1.45
CIT3YPR001W ILV1P00927 576 aaKnown RBP5.96□□□□□ -1.46
CIT3YPR001W HTB1P02293 131 aaKnown RBP5.96□□□□□ -1.46
CIT3YPR001W HTB2P02294 131 aa5.96□□□□□ -1.46
CIT3YPR001W PAB1P04147 577 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46 RIP-Chip
CIT3YPR001W YAR066WP0CX18 203 aa5.96□□□□□ -1.46
CIT3YPR001W YHR214WP0CX19 203 aa5.96□□□□□ -1.46
CIT3YPR001W SPS19P32573 292 aaKnown RBP5.96□□□□□ -1.46
CIT3YPR001W AST1P35183 429 aa5.96□□□□□ -1.46
CIT3YPR001W MAK5P38112 773 aaPredicted RBP5.96□□□□□ -1.46
CIT3YPR001W MRX3P38172 270 aa5.96□□□□□ -1.46
CIT3YPR001W PRS2P38620 318 aaKnown RBP5.96□□□□□ -1.46
CIT3YPR001W PCL6P40038 420 aa5.96□□□□□ -1.46
CIT3YPR001W HOC1P47124 396 aa5.96□□□□□ -1.46
CIT3YPR001W GET1P53192 235 aa5.96□□□□□ -1.46
CIT3YPR001W NOP19P53317 196 aaPredicted RBP5.96□□□□□ -1.46
CIT3YPR001W YNR048WP53740 393 aa5.96□□□□□ -1.46
CIT3YPR001W SAM50P53969 484 aa5.96□□□□□ -1.46
CIT3YPR001W MSS11Q03825 758 aa5.96□□□□□ -1.46
CIT3YPR001W TAF14P35189 244 aa5.95□□□□□ -1.46
CIT3YPR001W PHD1P36093 366 aa5.95□□□□□ -1.46
CIT3YPR001W RCK2P38623 610 aa5.95□□□□□ -1.46
CIT3YPR001W URA8P38627 578 aaPredicted RBP5.95□□□□□ -1.46
CIT3YPR001W OSH3P38713 996 aaKnown RBP5.95□□□□□ -1.46
CIT3YPR001W YHR035WP38769 630 aa5.95□□□□□ -1.46
CIT3YPR001W NPT1P39683 429 aaKnown RBP5.95□□□□□ -1.46
CIT3YPR001W COX15P40086 486 aa5.95□□□□□ -1.46
CIT3YPR001W VRG4P40107 337 aa5.95□□□□□ -1.46
CIT3YPR001W CSM2P40465 213 aa5.95□□□□□ -1.46
CIT3YPR001W YIR016WP40572 265 aa5.95□□□□□ -1.46
CIT3YPR001W YCH1P42937 148 aa5.95□□□□□ -1.46
CIT3YPR001W YFL040WP43562 540 aa5.95□□□□□ -1.46
CIT3YPR001W RIM13Q03792 727 aa5.95□□□□□ -1.46
CIT3YPR001W VBA1Q04301 562 aa5.95□□□□□ -1.46
CIT3YPR001W FAR8Q05040 523 aa5.95□□□□□ -1.46
CIT3YPR001W VPS74Q06385 345 aa5.95□□□□□ -1.46
CIT3YPR001W ATG17Q06410 417 aa5.95□□□□□ -1.46
CIT3YPR001W CSM4Q08955 156 aa5.95□□□□□ -1.46
CIT3YPR001W DET1Q99288 334 aaKnown RBP5.95□□□□□ -1.46
CIT3YPR001W POM152P39685 1337 aa5.94□□□□□ -1.46
CIT3YPR001W PGK1P00560 416 aaKnown RBP5.94□□□□□ -1.46
CIT3YPR001W SNF6P18888 332 aa5.94□□□□□ -1.46
CIT3YPR001W SPO11P23179 398 aa5.94□□□□□ -1.46
CIT3YPR001W RNA15P25299 296 aaPredicted RBP5.94□□□□□ -1.46
CIT3YPR001W YEF1P32622 495 aa5.94□□□□□ -1.46
CIT3YPR001W MRPL6P32904 214 aa5.94□□□□□ -1.46
CIT3YPR001W FRE2P36033 711 aa5.94□□□□□ -1.46
CIT3YPR001W RSM22P36056 628 aa5.94□□□□□ -1.46
CIT3YPR001W IDP2P41939 412 aa5.94□□□□□ -1.46
CIT3YPR001W TIS11P47977 285 aa5.94□□□□□ -1.46
CIT3YPR001W CPD1P53314 239 aa5.94□□□□□ -1.46
CIT3YPR001W SSU72P53538 206 aaPredicted RBP5.94□□□□□ -1.46
CIT3YPR001W YDR209CQ03480 137 aa5.94□□□□□ -1.46
CIT3YPR001W BNA5Q05979 453 aa5.94□□□□□ -1.46
CIT3YPR001W NDE2Q07500 545 aa5.94□□□□□ -1.46
CIT3YPR001W GAT3Q07928 141 aa5.94□□□□□ -1.46
CIT3YPR001W GPM2Q12008 311 aa5.94□□□□□ -1.46
CIT3YPR001W POM33Q12164 279 aa5.94□□□□□ -1.46
CIT3YPR001W TPT1Q12272 230 aaKnown RBP5.94□□□□□ -1.46
CIT3YPR001W ARP6Q12509 438 aa5.94□□□□□ -1.46
CIT3YPR001W MEX67Q99257 599 aaKnown RBP5.94□□□□□ -1.46
CIT3YPR001W HCM1P25364 564 aa5.93□□□□□ -1.46
CIT3YPR001W YCR100CP25606 316 aa5.93□□□□□ -1.46
CIT3YPR001W IDH1P28834 360 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
CIT3YPR001W UBC6P33296 250 aaPredicted RBP5.93□□□□□ -1.46
CIT3YPR001W CSE1P33307 960 aa5.93□□□□□ -1.46
CIT3YPR001W LOS1P33418 1100 aaPredicted RBP5.93□□□□□ -1.46
CIT3YPR001W ECM15P35195 104 aa5.93□□□□□ -1.46
CIT3YPR001W YKL063CP35725 167 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms