RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C MRPS9P38120 278 aa2.73□□□□□ -1.97
CUP9YPL177C IST2P38250 946 aa2.73□□□□□ -1.97
CUP9YPL177C BMT2P38278 337 aa2.73□□□□□ -1.97
CUP9YPL177C YHR122WP38829 231 aa2.73□□□□□ -1.97
CUP9YPL177C ALP1P38971 573 aa2.73□□□□□ -1.97
CUP9YPL177C PEX22P39718 180 aa2.73□□□□□ -1.97
CUP9YPL177C NAS2P40555 220 aa2.73□□□□□ -1.97
CUP9YPL177C PRM1P53835 661 aa2.73□□□□□ -1.97
CUP9YPL177C PDR16P53860 351 aaKnown RBP2.73□□□□□ -1.97
CUP9YPL177C RNH201P53942 307 aa2.73□□□□□ -1.97
CUP9YPL177C TRM82Q03774 444 aa2.73□□□□□ -1.97
CUP9YPL177C CSM3Q04659 317 aa2.73□□□□□ -1.97
CUP9YPL177C SRO7Q12038 1033 aa2.73□□□□□ -1.97
CUP9YPL177C YEL043WP32618 956 aa2.72□□□□□ -1.97
CUP9YPL177C SMP1P38128 452 aa2.72□□□□□ -1.97
CUP9YPL177C RCK2P38623 610 aa2.72□□□□□ -1.97
CUP9YPL177C CAJ1P39101 391 aa2.72□□□□□ -1.97
CUP9YPL177C YIL089WP40500 205 aa2.72□□□□□ -1.97
CUP9YPL177C STB1P42845 420 aa2.72□□□□□ -1.97
CUP9YPL177C YCH1P42937 148 aa2.72□□□□□ -1.97
CUP9YPL177C VEL1P53058 206 aa2.72□□□□□ -1.97
CUP9YPL177C YGR015CP53208 328 aa2.72□□□□□ -1.97
CUP9YPL177C RMI1Q02685 241 aa2.72□□□□□ -1.97
CUP9YPL177C MRX11Q03079 207 aa2.72□□□□□ -1.97
CUP9YPL177C PGC1Q08959 321 aa2.72□□□□□ -1.97
CUP9YPL177C YPQ1Q12010 308 aa2.72□□□□□ -1.97
CUP9YPL177C HIF1Q12373 385 aa2.72□□□□□ -1.97
CUP9YPL177C SPO24Q3E752 67 aa2.72□□□□□ -1.97
CUP9YPL177C RAD1P06777 1100 aa2.71□□□□□ -1.98
CUP9YPL177C ARF2P19146 181 aaKnown RBP2.71□□□□□ -1.98
CUP9YPL177C CIN8P27895 1000 aa2.71□□□□□ -1.98
CUP9YPL177C SHE1P38200 338 aa2.71□□□□□ -1.98
CUP9YPL177C IML3P38265 245 aa2.71□□□□□ -1.98
CUP9YPL177C LSG1P53145 640 aaKnown RBP2.71□□□□□ -1.98
CUP9YPL177C HST1P53685 503 aa2.71□□□□□ -1.98
CUP9YPL177C SUR7P54003 302 aa2.71□□□□□ -1.98
CUP9YPL177C TIR4Q12218 487 aaPredicted RBP2.71□□□□□ -1.98
CUP9YPL177C YBL111CQ3E7Y5 667 aa2.71□□□□□ -1.98
CUP9YPL177C YLL053CP0CD98 152 aa2.7□□□□□ -1.98
CUP9YPL177C ASP3-2P0CX77 362 aa2.7□□□□□ -1.98
CUP9YPL177C ASP3-3P0CX78 362 aa2.7□□□□□ -1.98
CUP9YPL177C ASP3-4P0CX79 362 aa2.7□□□□□ -1.98
CUP9YPL177C ASP3-1P0CZ17 362 aa2.7□□□□□ -1.98
CUP9YPL177C PUT4P15380 627 aa2.7□□□□□ -1.98
CUP9YPL177C UIP5P36137 443 aa2.7□□□□□ -1.98
CUP9YPL177C PRP39P39682 629 aaKnown RBP2.7□□□□□ -1.98
CUP9YPL177C MOB2P43563 287 aa2.7□□□□□ -1.98
CUP9YPL177C SCS7Q03529 384 aa2.7□□□□□ -1.98
CUP9YPL177C ECM11Q04110 302 aa2.7□□□□□ -1.98
CUP9YPL177C CHL4P38907 458 aa2.69□□□□□ -1.98
CUP9YPL177C FYV8P46949 817 aaKnown RBP2.69□□□□□ -1.98
CUP9YPL177C NAS6P50086 228 aa2.69□□□□□ -1.98
CUP9YPL177C ATP22P50273 684 aaPredicted RBP2.69□□□□□ -1.98
CUP9YPL177C YNL146WP53906 100 aa2.69□□□□□ -1.98
CUP9YPL177C PIN3Q06449 215 aa2.69□□□□□ -1.98
CUP9YPL177C RPN6Q12377 434 aa2.69□□□□□ -1.98
CUP9YPL177C TPM1P17536 199 aaKnown RBP2.68□□□□□ -1.98
CUP9YPL177C EPT1P22140 391 aa2.68□□□□□ -1.98
CUP9YPL177C MYO3P36006 1272 aa2.68□□□□□ -1.98
CUP9YPL177C YER184CP39961 794 aa2.68□□□□□ -1.98
CUP9YPL177C YMR134WP40207 237 aa2.68□□□□□ -1.98
CUP9YPL177C YNL320WP42840 284 aa2.68□□□□□ -1.98
CUP9YPL177C SHE4P51534 789 aa2.68□□□□□ -1.98
CUP9YPL177C FLC3P53121 802 aa2.68□□□□□ -1.98
CUP9YPL177C YGL114WP53134 725 aa2.68□□□□□ -1.98
CUP9YPL177C RRB1Q04225 511 aaKnown RBP2.68□□□□□ -1.98
CUP9YPL177C LDB17Q12342 491 aa2.68□□□□□ -1.98
CUP9YPL177C RAX2Q12465 1220 aa2.68□□□□□ -1.98
CUP9YPL177C TPI1P00942 248 aaKnown RBP2.67□□□□□ -1.98
CUP9YPL177C PEX32P38292 413 aa2.67□□□□□ -1.98
CUP9YPL177C LIN1P38852 340 aaPredicted RBP2.67□□□□□ -1.98
CUP9YPL177C RRT13P40042 185 aa2.67□□□□□ -1.98
CUP9YPL177C YFL012WP43580 148 aa2.67□□□□□ -1.98
CUP9YPL177C ALE1Q08548 619 aa2.67□□□□□ -1.98
CUP9YPL177C DDC1Q08949 612 aa2.67□□□□□ -1.98
CUP9YPL177C TAF10Q12030 206 aa2.67□□□□□ -1.98
CUP9YPL177C RGS2Q99188 309 aa2.67□□□□□ -1.98
CUP9YPL177C YOL085CQ99345 113 aa2.67□□□□□ -1.98
CUP9YPL177C SAL1D6W196 494 aa2.66□□□□□ -1.98
CUP9YPL177C ERG9P29704 444 aa2.66□□□□□ -1.98
CUP9YPL177C URA10P30402 227 aa2.66□□□□□ -1.98
CUP9YPL177C SHE3P38272 425 aaKnown RBP2.66□□□□□ -1.98
CUP9YPL177C MMS21P38632 267 aa2.66□□□□□ -1.98
CUP9YPL177C ECM34P38728 170 aa2.66□□□□□ -1.98
CUP9YPL177C SMF2P38778 549 aa2.66□□□□□ -1.98
CUP9YPL177C FHL1P39521 936 aa2.66□□□□□ -1.98
CUP9YPL177C BTT1P40314 149 aaPredicted RBP2.66□□□□□ -1.98
CUP9YPL177C BGL2P15703 313 aaKnown RBP2.65□□□□□ -1.99
CUP9YPL177C TRX1P22217 103 aaKnown RBP2.65□□□□□ -1.99
CUP9YPL177C DTR1P38125 572 aa2.65□□□□□ -1.99
CUP9YPL177C PCH2P38126 564 aa2.65□□□□□ -1.99
CUP9YPL177C RNY1Q02933 434 aaKnown RBP2.65□□□□□ -1.99
CUP9YPL177C SPH1Q06160 661 aa2.65□□□□□ -1.99
CUP9YPL177C YOL029CQ08187 201 aa2.65□□□□□ -1.99
CUP9YPL177C MMT2Q08970 484 aa2.65□□□□□ -1.99
CUP9YPL177C YAL067W-AQ8TGK6 75 aa2.65□□□□□ -1.99
CUP9YPL177C RPS19AP07280 144 aaKnown RBP2.64□□□□□ -1.99
CUP9YPL177C RPS19BP07281 144 aaPredicted RBP2.64□□□□□ -1.99
CUP9YPL177C SPS19P32573 292 aaKnown RBP2.64□□□□□ -1.99
CUP9YPL177C GGC1P38988 300 aa2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms