RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	STB1	P42845	420 aa		3.2	□□□□□ -1.9
RPN8	YOR261C	SUR7	P54003	302 aa		3.2	□□□□□ -1.9
RPN8	YOR261C	MRX11	Q03079	207 aa		3.2	□□□□□ -1.9
RPN8	YOR261C	RPS19A	P07280	144 aa	Known RBP	3.19	□□□□□ -1.9
RPN8	YOR261C	RPS19B	P07281	144 aa	Predicted RBP	3.19	□□□□□ -1.9
RPN8	YOR261C	MRPS5	P33759	307 aa		3.19	□□□□□ -1.9
RPN8	YOR261C	FHL1	P39521	936 aa		3.19	□□□□□ -1.9
RPN8	YOR261C	RPA34	P47006	233 aa	Predicted RBP	3.19	□□□□□ -1.9
RPN8	YOR261C	YNL143C	P53908	130 aa		3.19	□□□□□ -1.9
RPN8	YOR261C	SCS7	Q03529	384 aa		3.19	□□□□□ -1.9
RPN8	YOR261C	SMP3	Q04174	516 aa		3.19	□□□□□ -1.9
RPN8	YOR261C	MAS1	P10507	462 aa		3.18	□□□□□ -1.9
RPN8	YOR261C	SAG1	P20840	650 aa		3.18	□□□□□ -1.9
RPN8	YOR261C	MXR2	P25566	168 aa		3.18	□□□□□ -1.9
RPN8	YOR261C	LAS1	P36146	502 aa	Predicted RBP	3.18	□□□□□ -1.9
RPN8	YOR261C	IST2	P38250	946 aa		3.18	□□□□□ -1.9
RPN8	YOR261C	ECM34	P38728	170 aa		3.18	□□□□□ -1.9
RPN8	YOR261C	YHR122W	P38829	231 aa		3.18	□□□□□ -1.9
RPN8	YOR261C	RBG1	P39729	369 aa		3.18	□□□□□ -1.9
RPN8	YOR261C	RRT13	P40042	185 aa		3.18	□□□□□ -1.9
RPN8	YOR261C	PHO84	P25297	587 aa	Known RBP	3.17	□□□□□ -1.9
RPN8	YOR261C	HMX1	P32339	317 aa		3.17	□□□□□ -1.9
RPN8	YOR261C	MKK1	P32490	508 aa		3.17	□□□□□ -1.9
RPN8	YOR261C	FMT1	P32785	401 aa		3.17	□□□□□ -1.9
RPN8	YOR261C	MOB2	P43563	287 aa		3.17	□□□□□ -1.9
RPN8	YOR261C	YHC3	P47040	408 aa		3.17	□□□□□ -1.9
RPN8	YOR261C	COQ5	P49017	307 aa		3.17	□□□□□ -1.9
RPN8	YOR261C	NAT4	Q04751	285 aa		3.17	□□□□□ -1.9
RPN8	YOR261C	YMR310C	Q04867	317 aa	Predicted RBP	3.17	□□□□□ -1.9
RPN8	YOR261C	DBP9	Q06218	594 aa	Known RBP	3.17	□□□□□ -1.9
RPN8	YOR261C	ARF2	P19146	181 aa	Known RBP	3.16	□□□□□ -1.9
RPN8	YOR261C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
RPN8	YOR261C	SPS19	P32573	292 aa	Known RBP	3.16	□□□□□ -1.9
RPN8	YOR261C	YCH1	P42937	148 aa		3.16	□□□□□ -1.9
RPN8	YOR261C	LSG1	P53145	640 aa	Known RBP	3.16	□□□□□ -1.9
RPN8	YOR261C	SED5	Q01590	340 aa		3.16	□□□□□ -1.9
RPN8	YOR261C	ALE1	Q08548	619 aa		3.16	□□□□□ -1.9
RPN8	YOR261C	DDC1	Q08949	612 aa		3.16	□□□□□ -1.9
RPN8	YOR261C	NFI1	Q12216	726 aa		3.16	□□□□□ -1.9
RPN8	YOR261C	STE3	P06783	470 aa		3.15	□□□□□ -1.91
RPN8	YOR261C	UTR1	P21373	530 aa		3.15	□□□□□ -1.91
RPN8	YOR261C	CYM1	P32898	989 aa		3.15	□□□□□ -1.91
RPN8	YOR261C	DBP7	P36120	742 aa	Known RBP	3.15	□□□□□ -1.91
RPN8	YOR261C	HST1	P53685	503 aa		3.15	□□□□□ -1.91
RPN8	YOR261C	CSM3	Q04659	317 aa		3.15	□□□□□ -1.91
RPN8	YOR261C	APC5	Q08683	685 aa		3.15	□□□□□ -1.91
RPN8	YOR261C	YAL067W-A	Q8TGK6	75 aa		3.15	□□□□□ -1.91
RPN8	YOR261C	RAD1	P06777	1100 aa		3.14	□□□□□ -1.91
RPN8	YOR261C	TPS2	P31688	896 aa	Known RBP	3.14	□□□□□ -1.91
RPN8	YOR261C	GGC1	P38988	300 aa		3.14	□□□□□ -1.91
RPN8	YOR261C	PFS2	P42841	465 aa	Known RBP	3.14	□□□□□ -1.91
RPN8	YOR261C	API2	Q04413	109 aa		3.14	□□□□□ -1.91
RPN8	YOR261C	TAF10	Q12030	206 aa		3.14	□□□□□ -1.91
RPN8	YOR261C	GLE1	Q12315	538 aa		3.14	□□□□□ -1.91
RPN8	YOR261C	RPN6	Q12377	434 aa		3.14	□□□□□ -1.91
RPN8	YOR261C	PRM7	Q12459	698 aa		3.14	□□□□□ -1.91
RPN8	YOR261C	NBL1	Q3E7Y6	73 aa		3.14	□□□□□ -1.91
RPN8	YOR261C	AUS1	Q08409	1394 aa		3.13	□□□□□ -1.91
RPN8	YOR261C	STE2	D6VTK4	431 aa		3.13	□□□□□ -1.91
RPN8	YOR261C	TIP20	P33891	701 aa		3.13	□□□□□ -1.91
RPN8	YOR261C	PRY2	P36110	329 aa		3.13	□□□□□ -1.91
RPN8	YOR261C	SIF2	P38262	535 aa		3.13	□□□□□ -1.91
RPN8	YOR261C	PEX32	P38292	413 aa		3.13	□□□□□ -1.91
RPN8	YOR261C	YMR134W	P40207	237 aa		3.13	□□□□□ -1.91
RPN8	YOR261C	HST4	P53688	370 aa		3.13	□□□□□ -1.91
RPN8	YOR261C	AQR1	P53943	586 aa		3.13	□□□□□ -1.91
RPN8	YOR261C	SLF1	Q12034	447 aa	Known RBP	3.13	□□□□□ -1.91
RPN8	YOR261C	BGL2	P15703	313 aa	Known RBP	3.12	□□□□□ -1.91
RPN8	YOR261C	URA10	P30402	227 aa		3.12	□□□□□ -1.91
RPN8	YOR261C	APE4	P38821	490 aa		3.12	□□□□□ -1.91
RPN8	YOR261C	FUS3	P16892	353 aa	Known RBP	3.11	□□□□□ -1.91
RPN8	YOR261C	HXT2	P23585	541 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	ERG9	P29704	444 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	ZIP1	P31111	875 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	FRM2	P37261	193 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	IML3	P38265	245 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	MMS21	P38632	267 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	YNL320W	P42840	284 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	ARR1	Q06596	294 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	YOL029C	Q08187	201 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	YDR018C	Q12185	396 aa		3.11	□□□□□ -1.91
RPN8	YOR261C	SAL1	D6W196	494 aa		3.1	□□□□□ -1.91
RPN8	YOR261C	RAD23	P32628	398 aa	Known RBP	3.1	□□□□□ -1.91
RPN8	YOR261C	FRT2	P39734	528 aa		3.1	□□□□□ -1.91
RPN8	YOR261C	CUE3	P53137	624 aa	Known RBP	3.1	□□□□□ -1.91
RPN8	YOR261C	FAR10	Q06001	478 aa		3.1	□□□□□ -1.91
RPN8	YOR261C	MMT2	Q08970	484 aa		3.1	□□□□□ -1.91
RPN8	YOR261C	TAL1	P15019	335 aa	Known RBP	3.09	□□□□□ -1.91
RPN8	YOR261C	DCC1	P25559	380 aa		3.09	□□□□□ -1.91
RPN8	YOR261C	PCH2	P38126	564 aa		3.09	□□□□□ -1.91
RPN8	YOR261C	TAE1	P38340	232 aa		3.09	□□□□□ -1.91
RPN8	YOR261C	TRR2	P38816	342 aa		3.09	□□□□□ -1.91
RPN8	YOR261C	ALP1	P38971	573 aa		3.09	□□□□□ -1.91
RPN8	YOR261C	UFE1	P41834	346 aa		3.09	□□□□□ -1.91
RPN8	YOR261C	YFR018C	P43599	363 aa		3.09	□□□□□ -1.91
RPN8	YOR261C	PML1	Q07930	204 aa	Predicted RBP	3.09	□□□□□ -1.91
RPN8	YOR261C	RPN8	Q08723	338 aa	Known RBP	3.09	□□□□□ -1.91
RPN8	YOR261C	COX10	P21592	462 aa		3.08	□□□□□ -1.92
RPN8	YOR261C	YKL071W	P36086	256 aa		3.08	□□□□□ -1.92
RPN8	YOR261C	EFM1	P38732	585 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms