RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	RHO5	P53879	331 aa	Known RBP	13.19	□□□□□ -0.3
SHR5	YOL110W	ASI1	P54074	624 aa		13.19	□□□□□ -0.3
SHR5	YOL110W	SNZ1	Q03148	297 aa		13.19	□□□□□ -0.3
SHR5	YOL110W	TFB3	Q03290	321 aa		13.19	□□□□□ -0.3
SHR5	YOL110W	ENB1	Q08299	606 aa		13.19	□□□□□ -0.3
SHR5	YOL110W	DPM1	P14020	267 aa	Known RBP	13.18	□□□□□ -0.3
SHR5	YOL110W	NAM9	P27929	486 aa		13.18	□□□□□ -0.3
SHR5	YOL110W	TIM12	P32830	109 aa		13.18	□□□□□ -0.3
SHR5	YOL110W	MDE1	P47095	244 aa		13.18	□□□□□ -0.3
SHR5	YOL110W	YGL101W	P53144	215 aa		13.18	□□□□□ -0.3
SHR5	YOL110W	EKI1	Q03764	534 aa		13.18	□□□□□ -0.3
SHR5	YOL110W	YPS7	Q06325	596 aa		13.18	□□□□□ -0.3
SHR5	YOL110W	MET17	P06106	444 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	JEN1	P36035	616 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	MTC4	P38335	694 aa	Known RBP	13.17	□□□□□ -0.3
SHR5	YOL110W	RRP4	P38792	359 aa	Known RBP	13.17	□□□□□ -0.3
SHR5	YOL110W	IKS1	P47042	667 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	YGL235W	P53071	178 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	RBG2	P53295	368 aa	Known RBP	13.17	□□□□□ -0.3
SHR5	YOL110W	DML1	Q03652	475 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	ELP6	Q04868	273 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	SNT309	Q06091	175 aa	Predicted RBP	13.17	□□□□□ -0.3
SHR5	YOL110W	YPR127W	Q06494	345 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	AVO1	Q08236	1176 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	RAX1	Q08760	435 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	SIA1	Q12212	622 aa		13.17	□□□□□ -0.3
SHR5	YOL110W	YGK3	Q12222	375 aa	Predicted RBP	13.17	□□□□□ -0.3
SHR5	YOL110W	CPR3	P25719	182 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	VMA6	P32366	345 aa	Known RBP	13.16	□□□□□ -0.3
SHR5	YOL110W	MAE1	P36013	669 aa	Known RBP	13.16	□□□□□ -0.3
SHR5	YOL110W	ZRG8	P40021	1076 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	KRE29	P40026	464 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	BUD9	P53226	547 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	NQM1	P53228	333 aa	Predicted RBP	13.16	□□□□□ -0.3
SHR5	YOL110W	CGI121	Q03705	181 aa	Known RBP	13.16	□□□□□ -0.3
SHR5	YOL110W	ARP10	Q04549	284 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	RSA3	Q05942	220 aa	Known RBP	13.16	□□□□□ -0.3
SHR5	YOL110W	YPQ2	Q06328	317 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	ERF2	Q06551	359 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	YDL109C	Q12103	647 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	MCP1	Q12106	302 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	VCX1	Q99385	411 aa		13.16	□□□□□ -0.3
SHR5	YOL110W	RPS5	P26783	225 aa	Known RBP	13.15	□□□□□ -0.3
SHR5	YOL110W	RTC2	P38279	296 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	SKN7	P38889	622 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	HXT9	P40885	567 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	YJR098C	P47139	656 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	ECL1	P48235	211 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	YNR062C	P53748	327 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	HXT11	P54862	567 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	SNO4	Q04902	237 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	HSP33	Q08914	237 aa	Known RBP	13.15	□□□□□ -0.3
SHR5	YOL110W	YPL191C	Q08930	360 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	HSP32	Q08992	237 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	YOR032W-A	Q8TGS1	66 aa		13.15	□□□□□ -0.3
SHR5	YOL110W	ERD1	P16151	362 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	YPK2	P18961	677 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	RAD51	P25454	400 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	YCR102C	P25608	368 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	HSP30	P25619	332 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	HIS7	P33734	552 aa	Known RBP	13.14	□□□□□ -0.31
SHR5	YOL110W	SEF1	P34228	1148 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	DHR2	P36009	735 aa	Predicted RBP	13.14	□□□□□ -0.31
SHR5	YOL110W	YHR180W	P38868	163 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	YNL208W	P40159	199 aa	Known RBP	13.14	□□□□□ -0.31
SHR5	YOL110W	QRI7	P43122	407 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	YFR054C	P43622	192 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	ATG21	Q02887	496 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	CDA2	Q06703	312 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	YOR389W	Q08912	624 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	YPL278C	Q08990	100 aa		13.14	□□□□□ -0.31
SHR5	YOL110W	TAL1	P15019	335 aa	Known RBP	13.13	□□□□□ -0.31
SHR5	YOL110W	SLC1	P33333	303 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	GPX1	P36014	167 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	YKR015C	P36111	568 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	OM14	P38325	134 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	CHL4	P38907	458 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	GDI1	P39958	451 aa	Known RBP	13.13	□□□□□ -0.31
SHR5	YOL110W	PKP1	P40530	394 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	YDR249C	Q03787	373 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	YDR179W-A	Q03983	463 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	RNH1	Q04740	348 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	BUR2	Q05949	395 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	MLC2	Q06580	163 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	GSH2	Q08220	491 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	LSO1	Q3E827	93 aa		13.13	□□□□□ -0.31
SHR5	YOL110W	ENA1	P13587	1091 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	HAP4	P14064	554 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	NUP1	P20676	1076 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	SEC62	P21825	274 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	13.12	□□□□□ -0.31	not detected
SHR5	YOL110W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	13.12	□□□□□ -0.31	not detected
SHR5	YOL110W	SER3	P40054	469 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	STB1	P42845	420 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	RBL2	P48606	106 aa	Known RBP	13.12	□□□□□ -0.31
SHR5	YOL110W	BUD17	P53727	317 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	ENA2	Q01896	1091 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	PFA5	Q03289	374 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	OST6	Q03723	332 aa		13.12	□□□□□ -0.31
SHR5	YOL110W	YLR040C	Q07988	224 aa		13.12	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms