RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C ADH5P38113 351 aaKnown RBP1.97□□□□□ -2.09
RPB11YOL005C YBR241CP38142 488 aa1.97□□□□□ -2.09
RPB11YOL005C YAP3P38749 330 aa1.97□□□□□ -2.09
RPB11YOL005C LSM12P38828 187 aaKnown RBP1.97□□□□□ -2.09
RPB11YOL005C CIN2P46670 268 aa1.97□□□□□ -2.09
RPB11YOL005C CTK3P46963 296 aaPredicted RBP1.97□□□□□ -2.09
RPB11YOL005C YNR068CP53754 272 aa1.97□□□□□ -2.09
RPB11YOL005C SMP3Q04174 516 aa1.97□□□□□ -2.09
RPB11YOL005C YMR310CQ04867 317 aaPredicted RBP1.97□□□□□ -2.09
RPB11YOL005C FSH2Q05015 223 aa1.97□□□□□ -2.09
RPB11YOL005C NOP6Q07623 225 aaKnown RBP1.97□□□□□ -2.09
RPB11YOL005C YOL075CQ08234 1294 aa1.97□□□□□ -2.09
RPB11YOL005C YDL109CQ12103 647 aa1.97□□□□□ -2.09
RPB11YOL005C YOR012WQ12351 137 aa1.97□□□□□ -2.09
RPB11YOL005C IRC20Q06554 1556 aa1.97□□□□□ -2.09
RPB11YOL005C SPT7P35177 1332 aa1.96□□□□□ -2.1
RPB11YOL005C HEM4P06174 275 aa1.96□□□□□ -2.1
RPB11YOL005C RPS14AP06367 137 aaKnown RBP1.96□□□□□ -2.1
RPB11YOL005C RPL23AP0CX41 137 aaKnown RBP1.96□□□□□ -2.1
RPB11YOL005C RPL23BP0CX42 137 aaKnown RBP1.96□□□□□ -2.1
RPB11YOL005C ASP3-2P0CX77 362 aa1.96□□□□□ -2.1
RPB11YOL005C ASP3-3P0CX78 362 aa1.96□□□□□ -2.1
RPB11YOL005C ASP3-4P0CX79 362 aa1.96□□□□□ -2.1
RPB11YOL005C ASP3-1P0CZ17 362 aa1.96□□□□□ -2.1
RPB11YOL005C MAS1P10507 462 aa1.96□□□□□ -2.1
RPB11YOL005C CHA1P25379 360 aaKnown RBP1.96□□□□□ -2.1
RPB11YOL005C COS9P36034 407 aa1.96□□□□□ -2.1
RPB11YOL005C BMT2P38278 337 aa1.96□□□□□ -2.1
RPB11YOL005C RPS14BP39516 138 aaKnown RBP1.96□□□□□ -2.1
RPB11YOL005C PEX22P39718 180 aa1.96□□□□□ -2.1
RPB11YOL005C VEL1P53058 206 aa1.96□□□□□ -2.1
RPB11YOL005C RET3P53600 189 aa1.96□□□□□ -2.1
RPB11YOL005C AQR1P53943 586 aa1.96□□□□□ -2.1
RPB11YOL005C PRP38Q00723 242 aaPredicted RBP1.96□□□□□ -2.1
RPB11YOL005C GAS2Q06135 555 aa1.96□□□□□ -2.1
RPB11YOL005C YLR177WQ06251 628 aa1.96□□□□□ -2.1
RPB11YOL005C YPQ1Q12010 308 aa1.96□□□□□ -2.1
RPB11YOL005C SRO7Q12038 1033 aa1.96□□□□□ -2.1
RPB11YOL005C DET1Q99288 334 aaKnown RBP1.96□□□□□ -2.1
RPB11YOL005C YSP2Q06681 1438 aa1.96□□□□□ -2.1
RPB11YOL005C PDR15Q04182 1529 aaKnown RBP1.96□□□□□ -2.1
RPB11YOL005C GDB1Q06625 1536 aa1.96□□□□□ -2.1
RPB11YOL005C CCH1P50077 2039 aa1.95□□□□□ -2.1
RPB11YOL005C STE3P06783 470 aa1.95□□□□□ -2.1
RPB11YOL005C LDS1P31379 325 aa1.95□□□□□ -2.1
RPB11YOL005C MRPS9P38120 278 aa1.95□□□□□ -2.1
RPB11YOL005C APE4P38821 490 aa1.95□□□□□ -2.1
RPB11YOL005C SEO1P39709 593 aa1.95□□□□□ -2.1
RPB11YOL005C YER184CP39961 794 aa1.95□□□□□ -2.1
RPB11YOL005C RPA34P47006 233 aaPredicted RBP1.95□□□□□ -2.1
RPB11YOL005C PGU1P47180 361 aa1.95□□□□□ -2.1
RPB11YOL005C CUE3P53137 624 aaKnown RBP1.95□□□□□ -2.1
RPB11YOL005C TPS1Q00764 495 aaKnown RBP1.95□□□□□ -2.1
RPB11YOL005C ARR1Q06596 294 aa1.95□□□□□ -2.1
RPB11YOL005C ATP16Q12165 160 aa1.95□□□□□ -2.1
RPB11YOL005C RPL21BQ12672 160 aaKnown RBP1.95□□□□□ -2.1
RPB11YOL005C MLP2P40457 1679 aa1.94□□□□□ -2.1
RPB11YOL005C ADH1P00330 348 aaKnown RBP1.94□□□□□ -2.1
RPB11YOL005C EFB1P32471 206 aaKnown RBP1.94□□□□□ -2.1
RPB11YOL005C ANP1P32629 500 aa1.94□□□□□ -2.1
RPB11YOL005C PDC2P32896 925 aa1.94□□□□□ -2.1
RPB11YOL005C YPT35P38815 214 aaKnown RBP1.94□□□□□ -2.1
RPB11YOL005C STB1P42845 420 aa1.94□□□□□ -2.1
RPB11YOL005C BIO3P50277 480 aa1.94□□□□□ -2.1
RPB11YOL005C CDH1P53197 566 aa1.94□□□□□ -2.1
RPB11YOL005C YNL143CP53908 130 aa1.94□□□□□ -2.1
RPB11YOL005C RNH201P53942 307 aa1.94□□□□□ -2.1
RPB11YOL005C UTP6Q02354 440 aaKnown RBP1.94□□□□□ -2.1
RPB11YOL005C RPL21AQ02753 160 aaKnown RBP1.94□□□□□ -2.1
RPB11YOL005C ECM11Q04110 302 aa1.94□□□□□ -2.1
RPB11YOL005C YPR078CQ06813 372 aa1.94□□□□□ -2.1
RPB11YOL005C APC5Q08683 685 aa1.94□□□□□ -2.1
RPB11YOL005C SKS1Q12505 502 aa1.94□□□□□ -2.1
RPB11YOL005C YOR093CQ12275 1648 aa1.94□□□□□ -2.1
RPB11YOL005C GEA1P47102 1408 aaPredicted RBP1.93□□□□□ -2.1
RPB11YOL005C YLL053CP0CD98 152 aa1.93□□□□□ -2.1
RPB11YOL005C MAS2P11914 482 aa1.93□□□□□ -2.1
RPB11YOL005C UNG1P12887 359 aa1.93□□□□□ -2.1
RPB11YOL005C THR4P16120 514 aaKnown RBP1.93□□□□□ -2.1
RPB11YOL005C CKI1P20485 582 aa1.93□□□□□ -2.1
RPB11YOL005C HMX1P32339 317 aa1.93□□□□□ -2.1
RPB11YOL005C SMI1P32566 505 aa1.93□□□□□ -2.1
RPB11YOL005C MRPL27P36526 146 aaPredicted RBP1.93□□□□□ -2.1
RPB11YOL005C RBG1P39729 369 aa1.93□□□□□ -2.1
RPB11YOL005C YIL089WP40500 205 aa1.93□□□□□ -2.1
RPB11YOL005C KEG1P43614 200 aa1.93□□□□□ -2.1
RPB11YOL005C YGR018CP53211 109 aa1.93□□□□□ -2.1
RPB11YOL005C LST7P53237 242 aa1.93□□□□□ -2.1
RPB11YOL005C PRM1P53835 661 aa1.93□□□□□ -2.1
RPB11YOL005C VAC7P53950 1165 aa1.93□□□□□ -2.1
RPB11YOL005C SLT2Q00772 484 aa1.93□□□□□ -2.1
RPB11YOL005C DBP9Q06218 594 aaKnown RBP1.93□□□□□ -2.1
RPB11YOL005C YOR376WQ08900 122 aa1.93□□□□□ -2.1
RPB11YOL005C MCT1Q12283 360 aa1.93□□□□□ -2.1
RPB11YOL005C SFM1Q12314 213 aa1.93□□□□□ -2.1
RPB11YOL005C UBA3Q99344 299 aa1.93□□□□□ -2.1
RPB11YOL005C ARO1P08566 1588 aaKnown RBP1.93□□□□□ -2.1
RPB11YOL005C TRM3Q07527 1436 aa1.92□□□□□ -2.1
RPB11YOL005C PDR12Q02785 1511 aa1.92□□□□□ -2.1
RPB11YOL005C CBP6P07253 162 aaPredicted RBP1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms