RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W YPT35P38815 214 aaKnown RBP1.81□□□□□ -2.12
CTK3YML112W RBG1P39729 369 aa1.81□□□□□ -2.12
CTK3YML112W SPO73P40031 143 aa1.81□□□□□ -2.12
CTK3YML112W YIL059CP40520 121 aa1.81□□□□□ -2.12
CTK3YML112W UFE1P41834 346 aa1.81□□□□□ -2.12
CTK3YML112W RRB1Q04225 511 aaKnown RBP1.81□□□□□ -2.12
CTK3YML112W API2Q04413 109 aa1.81□□□□□ -2.12
CTK3YML112W YOL029CQ08187 201 aa1.81□□□□□ -2.12
CTK3YML112W YOL075CQ08234 1294 aa1.81□□□□□ -2.12
CTK3YML112W MMT2Q08970 484 aa1.81□□□□□ -2.12
CTK3YML112W GLE1Q12315 538 aa1.81□□□□□ -2.12
CTK3YML112W RPS14AP06367 137 aaKnown RBP1.8□□□□□ -2.12
CTK3YML112W MNE1P24720 663 aa1.8□□□□□ -2.12
CTK3YML112W RPS14BP39516 138 aaKnown RBP1.8□□□□□ -2.12
CTK3YML112W COS4P43542 379 aa1.8□□□□□ -2.12
CTK3YML112W NRM1P53718 249 aa1.8□□□□□ -2.12
CTK3YML112W UTP15Q04305 513 aaKnown RBP1.8□□□□□ -2.12
CTK3YML112W FAR10Q06001 478 aa1.8□□□□□ -2.12
CTK3YML112W YFH1Q07540 174 aa1.8□□□□□ -2.12
CTK3YML112W FLO11P08640 1367 aa1.8□□□□□ -2.12
CTK3YML112W ITR2P30606 609 aa1.79□□□□□ -2.12
CTK3YML112W MDL1P33310 695 aa1.79□□□□□ -2.12
CTK3YML112W SRB2P34162 210 aa1.79□□□□□ -2.12
CTK3YML112W MLH1P38920 769 aa1.79□□□□□ -2.12
CTK3YML112W EFM4P40516 257 aa1.79□□□□□ -2.12
CTK3YML112W MLC1P53141 149 aa1.79□□□□□ -2.12
CTK3YML112W RET3P53600 189 aa1.79□□□□□ -2.12
CTK3YML112W APC4Q04601 652 aa1.79□□□□□ -2.12
CTK3YML112W HRT1Q08273 121 aa1.79□□□□□ -2.12
CTK3YML112W PAR32Q12515 295 aaKnown RBP1.79□□□□□ -2.12
CTK3YML112W DET1Q99288 334 aaKnown RBP1.79□□□□□ -2.12
CTK3YML112W VAM7P32912 316 aa1.78□□□□□ -2.12
CTK3YML112W CBF5P33322 483 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
CTK3YML112W EFM3P47163 339 aa1.78□□□□□ -2.12
CTK3YML112W GMC1Q04399 608 aa1.78□□□□□ -2.12
CTK3YML112W TFB5Q3E7C1 72 aaPredicted RBP1.78□□□□□ -2.12
CTK3YML112W COX10P21592 462 aa1.77□□□□□ -2.13
CTK3YML112W PSO2P30620 661 aa1.77□□□□□ -2.13
CTK3YML112W BDH1P39714 382 aa1.77□□□□□ -2.13
CTK3YML112W YIL054WP40524 105 aa1.77□□□□□ -2.13
CTK3YML112W YJL144WP47009 104 aa1.77□□□□□ -2.13
CTK3YML112W LST7P53237 242 aa1.77□□□□□ -2.13
CTK3YML112W PRM1P53835 661 aa1.77□□□□□ -2.13
CTK3YML112W TRM82Q03774 444 aa1.77□□□□□ -2.13
CTK3YML112W ALE1Q08548 619 aa1.77□□□□□ -2.13
CTK3YML112W SLM3Q12093 417 aa1.77□□□□□ -2.13
CTK3YML112W YDL211CQ12121 372 aa1.77□□□□□ -2.13
CTK3YML112W FRE8Q12209 686 aa1.77□□□□□ -2.13
CTK3YML112W FSH3Q99369 266 aa1.77□□□□□ -2.13
CTK3YML112W VPS63O13549 108 aa1.76□□□□□ -2.13
CTK3YML112W ARF2P19146 181 aaKnown RBP1.76□□□□□ -2.13
CTK3YML112W DBR1P24309 405 aaKnown RBP1.76□□□□□ -2.13
CTK3YML112W TIP20P33891 701 aa1.76□□□□□ -2.13
CTK3YML112W MPE1P35728 441 aaKnown RBP1.76□□□□□ -2.13
CTK3YML112W ASG7P46993 209 aa1.76□□□□□ -2.13
CTK3YML112W NAS6P50086 228 aa1.76□□□□□ -2.13
CTK3YML112W SUR7P54003 302 aa1.76□□□□□ -2.13
CTK3YML112W SCS7Q03529 384 aa1.76□□□□□ -2.13
CTK3YML112W YMR310CQ04867 317 aaPredicted RBP1.76□□□□□ -2.13
CTK3YML112W SAL1D6W196 494 aa1.75□□□□□ -2.13
CTK3YML112W HSP82P02829 709 aaKnown RBP1.75□□□□□ -2.13
CTK3YML112W MAS1P10507 462 aa1.75□□□□□ -2.13
CTK3YML112W CUP2P15315 225 aa1.75□□□□□ -2.13
CTK3YML112W HMX1P32339 317 aa1.75□□□□□ -2.13
CTK3YML112W TAE1P38340 232 aa1.75□□□□□ -2.13
CTK3YML112W LCP5P40079 357 aaPredicted RBP1.75□□□□□ -2.13
CTK3YML112W SEC28P40509 296 aaKnown RBP1.75□□□□□ -2.13
CTK3YML112W YFR018CP43599 363 aa1.75□□□□□ -2.13
CTK3YML112W AIM33Q04516 312 aa1.75□□□□□ -2.13
CTK3YML112W APC5Q08683 685 aa1.75□□□□□ -2.13
CTK3YML112W RPN8Q08723 338 aaKnown RBP1.75□□□□□ -2.13
CTK3YML112W CPT1P17898 393 aa1.74□□□□□ -2.13
CTK3YML112W LRP1P38801 184 aaKnown RBP1.74□□□□□ -2.13
CTK3YML112W MIC19P43594 170 aa1.74□□□□□ -2.13
CTK3YML112W BUD13P46947 266 aaPredicted RBP1.74□□□□□ -2.13
CTK3YML112W SMP3Q04174 516 aa1.74□□□□□ -2.13
CTK3YML112W CSI1Q04368 295 aa1.74□□□□□ -2.13
CTK3YML112W MHP1P43638 1398 aa1.73□□□□□ -2.13
CTK3YML112W CTA1P15202 515 aa1.73□□□□□ -2.13
CTK3YML112W THR4P16120 514 aaKnown RBP1.73□□□□□ -2.13
CTK3YML112W FAR1P21268 830 aa1.73□□□□□ -2.13
CTK3YML112W YMR262WP38430 313 aa1.73□□□□□ -2.13
CTK3YML112W JEM1P40358 645 aa1.73□□□□□ -2.13
CTK3YML112W HCH1P53834 153 aa1.73□□□□□ -2.13
CTK3YML112W EOS1P53938 366 aa1.73□□□□□ -2.13
CTK3YML112W ARR1Q06596 294 aa1.73□□□□□ -2.13
CTK3YML112W YPR078CQ06813 372 aa1.73□□□□□ -2.13
CTK3YML112W YDR018CQ12185 396 aa1.73□□□□□ -2.13
CTK3YML112W RPS23AP0CX29 145 aaKnown RBP1.72□□□□□ -2.13
CTK3YML112W RPS23BP0CX30 145 aa1.72□□□□□ -2.13
CTK3YML112W DAL5P15365 543 aa1.72□□□□□ -2.13
CTK3YML112W RSC1P53236 928 aa1.72□□□□□ -2.13
CTK3YML112W SMD1Q02260 146 aaPredicted RBP1.72□□□□□ -2.13
CTK3YML112W INP1Q03694 420 aa1.72□□□□□ -2.13
CTK3YML112W RGS2Q99188 309 aa1.72□□□□□ -2.13
CTK3YML112W RPS16AP0CX51 143 aaKnown RBP1.71□□□□□ -2.14
CTK3YML112W RPS16BP0CX52 143 aaKnown RBP1.71□□□□□ -2.14
CTK3YML112W SCH9P11792 824 aaKnown RBP1.71□□□□□ -2.14
CTK3YML112W HPR1P17629 752 aaKnown RBP1.71□□□□□ -2.14
CTK3YML112W CKI1P20485 582 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms