RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	PRR1	P28708	518 aa		2.71	□□□□□ -1.98
CST9	YLR394W	TIM17	P39515	158 aa		2.71	□□□□□ -1.98
CST9	YLR394W	ALD5	P40047	520 aa	Known RBP	2.71	□□□□□ -1.98
CST9	YLR394W	LCP5	P40079	357 aa	Predicted RBP	2.71	□□□□□ -1.98
CST9	YLR394W	YNL208W	P40159	199 aa	Known RBP	2.71	□□□□□ -1.98
CST9	YLR394W	YNL143C	P53908	130 aa		2.71	□□□□□ -1.98
CST9	YLR394W	LIP2	Q06005	328 aa		2.71	□□□□□ -1.98
CST9	YLR394W	PEX27	Q08580	376 aa		2.71	□□□□□ -1.98
CST9	YLR394W	SAG1	P20840	650 aa		2.7	□□□□□ -1.98
CST9	YLR394W	CDC50	P25656	391 aa		2.7	□□□□□ -1.98
CST9	YLR394W	MSK1	P32048	576 aa		2.7	□□□□□ -1.98
CST9	YLR394W	VPH1	P32563	840 aa	Known RBP	2.7	□□□□□ -1.98
CST9	YLR394W	VAM7	P32912	316 aa		2.7	□□□□□ -1.98
CST9	YLR394W	YLH47	Q06493	454 aa		2.7	□□□□□ -1.98
CST9	YLR394W	PML1	Q07930	204 aa	Predicted RBP	2.7	□□□□□ -1.98
CST9	YLR394W	DET1	Q99288	334 aa	Known RBP	2.7	□□□□□ -1.98
CST9	YLR394W	STE3	P06783	470 aa		2.69	□□□□□ -1.98
CST9	YLR394W	PRB1	P09232	635 aa		2.69	□□□□□ -1.98
CST9	YLR394W	FAR1	P21268	830 aa		2.69	□□□□□ -1.98
CST9	YLR394W	GRR1	P24814	1151 aa		2.69	□□□□□ -1.98
CST9	YLR394W	PHO84	P25297	587 aa	Known RBP	2.69	□□□□□ -1.98
CST9	YLR394W	RDS1	P25611	832 aa		2.69	□□□□□ -1.98
CST9	YLR394W	ZUO1	P32527	433 aa	Known RBP	2.69	□□□□□ -1.98
CST9	YLR394W	ANP1	P32629	500 aa		2.69	□□□□□ -1.98
CST9	YLR394W	PRS1	P32895	427 aa	Known RBP	2.69	□□□□□ -1.98
CST9	YLR394W	PFS1	P38872	237 aa		2.69	□□□□□ -1.98
CST9	YLR394W	LYS12	P40495	371 aa	Known RBP	2.69	□□□□□ -1.98
CST9	YLR394W	DFG10	P40526	253 aa		2.69	□□□□□ -1.98
CST9	YLR394W	NAS2	P40555	220 aa		2.69	□□□□□ -1.98
CST9	YLR394W	EFM3	P47163	339 aa		2.69	□□□□□ -1.98
CST9	YLR394W	SEH1	P53011	349 aa	Known RBP	2.69	□□□□□ -1.98
CST9	YLR394W	MPS2	P53159	387 aa		2.69	□□□□□ -1.98
CST9	YLR394W	REX2	P54964	269 aa	Known RBP	2.69	□□□□□ -1.98
CST9	YLR394W	PCL9	Q12477	304 aa		2.69	□□□□□ -1.98
CST9	YLR394W	MEX67	Q99257	599 aa	Known RBP	2.69	□□□□□ -1.98
CST9	YLR394W	FSH3	Q99369	266 aa		2.69	□□□□□ -1.98
CST9	YLR394W	SNF2	P22082	1703 aa		2.69	□□□□□ -1.98
CST9	YLR394W	YIL177C	P40434	1758 aa		2.69	□□□□□ -1.98
CST9	YLR394W	YJL225C	P40889	1758 aa		2.69	□□□□□ -1.98
CST9	YLR394W	RPS18A	P0CX55	146 aa	Known RBP	2.68	□□□□□ -1.98
CST9	YLR394W	RPS18B	P0CX56	146 aa	Predicted RBP	2.68	□□□□□ -1.98
CST9	YLR394W	MAS2	P11914	482 aa		2.68	□□□□□ -1.98
CST9	YLR394W	ATG7	P38862	630 aa		2.68	□□□□□ -1.98
CST9	YLR394W	EAF6	P47128	113 aa		2.68	□□□□□ -1.98
CST9	YLR394W	VAC7	P53950	1165 aa		2.68	□□□□□ -1.98
CST9	YLR394W	DNL4	Q08387	944 aa	Predicted RBP	2.68	□□□□□ -1.98
CST9	YLR394W	YOR376W	Q08900	122 aa		2.68	□□□□□ -1.98
CST9	YLR394W	PSY3	Q12318	242 aa		2.68	□□□□□ -1.98
CST9	YLR394W	ROM2	P51862	1356 aa	Known RBP	2.68	□□□□□ -1.98
CST9	YLR394W	VPS13	Q07878	3144 aa		2.68	□□□□□ -1.98
CST9	YLR394W	ZRC1	P20107	442 aa		2.68	□□□□□ -1.98
CST9	YLR394W	MRPL8	P22353	238 aa		2.68	□□□□□ -1.98
CST9	YLR394W	YGR016W	P53209	190 aa		2.68	□□□□□ -1.98
CST9	YLR394W	YGR018C	P53211	109 aa		2.68	□□□□□ -1.98
CST9	YLR394W	YDR286C	Q05530	114 aa		2.68	□□□□□ -1.98
CST9	YLR394W	SLM3	Q12093	417 aa		2.68	□□□□□ -1.98
CST9	YLR394W	RSF2	P46974	1380 aa		2.67	□□□□□ -1.98
CST9	YLR394W	COX4	P04037	155 aa		2.67	□□□□□ -1.98
CST9	YLR394W	CKI1	P20485	582 aa		2.67	□□□□□ -1.98
CST9	YLR394W	GIT1	P25346	518 aa		2.67	□□□□□ -1.98
CST9	YLR394W	SSE1	P32589	693 aa	Known RBP	2.67	□□□□□ -1.98
CST9	YLR394W	MRP21	P38175	177 aa		2.67	□□□□□ -1.98
CST9	YLR394W	GDT1	P38301	280 aa	Predicted RBP	2.67	□□□□□ -1.98
CST9	YLR394W	RPA34	P47006	233 aa	Predicted RBP	2.67	□□□□□ -1.98
CST9	YLR394W	CUE3	P53137	624 aa	Known RBP	2.67	□□□□□ -1.98
CST9	YLR394W	AQR1	P53943	586 aa		2.67	□□□□□ -1.98
CST9	YLR394W	MRPS16	Q02608	121 aa		2.67	□□□□□ -1.98
CST9	YLR394W	MSC3	Q05812	728 aa		2.67	□□□□□ -1.98
CST9	YLR394W	SHS1	Q07657	551 aa		2.67	□□□□□ -1.98
CST9	YLR394W	HTZ1	Q12692	134 aa	Known RBP	2.67	□□□□□ -1.98
CST9	YLR394W	ADE6	P38972	1358 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	IKI3	Q06706	1349 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	ADH1	P00330	348 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	RPS14A	P06367	137 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	THR4	P16120	514 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	PMT2	P31382	759 aa		2.66	□□□□□ -1.98
CST9	YLR394W	EFB1	P32471	206 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	IES6	P32617	166 aa		2.66	□□□□□ -1.98
CST9	YLR394W	MRPL27	P36526	146 aa	Predicted RBP	2.66	□□□□□ -1.98
CST9	YLR394W	YBL028C	P38202	106 aa		2.66	□□□□□ -1.98
CST9	YLR394W	LSM12	P38828	187 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	RPS14B	P39516	138 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	SNL1	P40548	159 aa		2.66	□□□□□ -1.98
CST9	YLR394W	IGD1	P43598	195 aa		2.66	□□□□□ -1.98
CST9	YLR394W	TRF5	P48561	642 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	ALF1	P53904	254 aa		2.66	□□□□□ -1.98
CST9	YLR394W	PRP38	Q00723	242 aa	Predicted RBP	2.66	□□□□□ -1.98
CST9	YLR394W	ENT5	Q03769	411 aa	Known RBP	2.66	□□□□□ -1.98
CST9	YLR394W	SMP3	Q04174	516 aa		2.66	□□□□□ -1.98
CST9	YLR394W	PGC1	Q08959	321 aa		2.66	□□□□□ -1.98
CST9	YLR394W	ATP16	Q12165	160 aa		2.66	□□□□□ -1.98
CST9	YLR394W	APC1	P53886	1748 aa		2.65	□□□□□ -1.98
CST9	YLR394W	HEM4	P06174	275 aa		2.65	□□□□□ -1.99
CST9	YLR394W	RPL23A	P0CX41	137 aa	Known RBP	2.65	□□□□□ -1.99
CST9	YLR394W	RPL23B	P0CX42	137 aa	Known RBP	2.65	□□□□□ -1.99
CST9	YLR394W	TPM1	P17536	199 aa	Known RBP	2.65	□□□□□ -1.99
CST9	YLR394W	MRPS5	P33759	307 aa		2.65	□□□□□ -1.99
CST9	YLR394W	YHR122W	P38829	231 aa		2.65	□□□□□ -1.99
CST9	YLR394W	YCH1	P42937	148 aa		2.65	□□□□□ -1.99
CST9	YLR394W	YLR177W	Q06251	628 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms