RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W COS9P36034 407 aa1.75□□□□□ -2.13
SEC22YLR268W IST2P38250 946 aa1.75□□□□□ -2.13
SEC22YLR268W RCK2P38623 610 aa1.75□□□□□ -2.13
SEC22YLR268W ATG7P38862 630 aa1.75□□□□□ -2.13
SEC22YLR268W RBG1P39729 369 aa1.75□□□□□ -2.13
SEC22YLR268W YGL262WP53054 175 aa1.75□□□□□ -2.13
SEC22YLR268W YNL146WP53906 100 aa1.75□□□□□ -2.13
SEC22YLR268W YDR115WQ04598 105 aa1.75□□□□□ -2.13
SEC22YLR268W YLR177WQ06251 628 aa1.75□□□□□ -2.13
SEC22YLR268W SLM3Q12093 417 aa1.75□□□□□ -2.13
SEC22YLR268W SPO24Q3E752 67 aa1.75□□□□□ -2.13
SEC22YLR268W RGS2Q99188 309 aa1.75□□□□□ -2.13
SEC22YLR268W YLL053CP0CD98 152 aa1.74□□□□□ -2.13
SEC22YLR268W ASP3-2P0CX77 362 aa1.74□□□□□ -2.13
SEC22YLR268W ASP3-3P0CX78 362 aa1.74□□□□□ -2.13
SEC22YLR268W ASP3-4P0CX79 362 aa1.74□□□□□ -2.13
SEC22YLR268W ASP3-1P0CZ17 362 aa1.74□□□□□ -2.13
SEC22YLR268W CIN8P27895 1000 aa1.74□□□□□ -2.13
SEC22YLR268W ERG9P29704 444 aa1.74□□□□□ -2.13
SEC22YLR268W MRPL27P36526 146 aaPredicted RBP1.74□□□□□ -2.13
SEC22YLR268W ALP1P38971 573 aa1.74□□□□□ -2.13
SEC22YLR268W PRP39P39682 629 aaKnown RBP1.74□□□□□ -2.13
SEC22YLR268W PEX22P39718 180 aa1.74□□□□□ -2.13
SEC22YLR268W YER184CP39961 794 aa1.74□□□□□ -2.13
SEC22YLR268W YMR134WP40207 237 aa1.74□□□□□ -2.13
SEC22YLR268W NAS2P40555 220 aa1.74□□□□□ -2.13
SEC22YLR268W YNL320WP42840 284 aa1.74□□□□□ -2.13
SEC22YLR268W PFS2P42841 465 aaKnown RBP1.74□□□□□ -2.13
SEC22YLR268W MOB2P43563 287 aa1.74□□□□□ -2.13
SEC22YLR268W FYV8P46949 817 aaKnown RBP1.74□□□□□ -2.13
SEC22YLR268W PGU1P47180 361 aa1.74□□□□□ -2.13
SEC22YLR268W BIO3P50277 480 aa1.74□□□□□ -2.13
SEC22YLR268W RNH201P53942 307 aa1.74□□□□□ -2.13
SEC22YLR268W TRM82Q03774 444 aa1.74□□□□□ -2.13
SEC22YLR268W CSM3Q04659 317 aa1.74□□□□□ -2.13
SEC22YLR268W NAT4Q04751 285 aa1.74□□□□□ -2.13
SEC22YLR268W GAS2Q06135 555 aa1.74□□□□□ -2.13
SEC22YLR268W SRO7Q12038 1033 aa1.74□□□□□ -2.13
SEC22YLR268W LDB17Q12342 491 aa1.74□□□□□ -2.13
SEC22YLR268W RNR2P09938 399 aaKnown RBP1.73□□□□□ -2.13
SEC22YLR268W UTR1P21373 530 aa1.73□□□□□ -2.13
SEC22YLR268W TRX1P22217 103 aaKnown RBP1.73□□□□□ -2.13
SEC22YLR268W PMT2P31382 759 aa1.73□□□□□ -2.13
SEC22YLR268W TOA1P32773 286 aa1.73□□□□□ -2.13
SEC22YLR268W YBR241CP38142 488 aa1.73□□□□□ -2.13
SEC22YLR268W PEX32P38292 413 aa1.73□□□□□ -2.13
SEC22YLR268W LIN1P38852 340 aaPredicted RBP1.73□□□□□ -2.13
SEC22YLR268W AIM23P47015 356 aa1.73□□□□□ -2.13
SEC22YLR268W SHE4P51534 789 aa1.73□□□□□ -2.13
SEC22YLR268W SEH1P53011 349 aaKnown RBP1.73□□□□□ -2.13
SEC22YLR268W YGL114WP53134 725 aa1.73□□□□□ -2.13
SEC22YLR268W LSG1P53145 640 aaKnown RBP1.73□□□□□ -2.13
SEC22YLR268W YGR015CP53208 328 aa1.73□□□□□ -2.13
SEC22YLR268W SLT2Q00772 484 aa1.73□□□□□ -2.13
SEC22YLR268W SPH1Q06160 661 aa1.73□□□□□ -2.13
SEC22YLR268W YOR376WQ08900 122 aa1.73□□□□□ -2.13
SEC22YLR268W FRE8Q12209 686 aa1.73□□□□□ -2.13
SEC22YLR268W RPL21BQ12672 160 aaKnown RBP1.73□□□□□ -2.13
SEC22YLR268W ADH1P00330 348 aaKnown RBP1.72□□□□□ -2.13
SEC22YLR268W RPS14AP06367 137 aaKnown RBP1.72□□□□□ -2.13
SEC22YLR268W RAD1P06777 1100 aa1.72□□□□□ -2.13
SEC22YLR268W MKK1P32490 508 aa1.72□□□□□ -2.13
SEC22YLR268W ECT1P33412 323 aa1.72□□□□□ -2.13
SEC22YLR268W SRB2P34162 210 aa1.72□□□□□ -2.13
SEC22YLR268W MYO3P36006 1272 aa1.72□□□□□ -2.13
SEC22YLR268W SHE1P38200 338 aa1.72□□□□□ -2.13
SEC22YLR268W IML3P38265 245 aa1.72□□□□□ -2.13
SEC22YLR268W SHE3P38272 425 aaKnown RBP1.72□□□□□ -2.13
SEC22YLR268W RPS14BP39516 138 aaKnown RBP1.72□□□□□ -2.13
SEC22YLR268W STB1P42845 420 aa1.72□□□□□ -2.13
SEC22YLR268W YCH1P42937 148 aa1.72□□□□□ -2.13
SEC22YLR268W CDH1P53197 566 aa1.72□□□□□ -2.13
SEC22YLR268W ALE1Q08548 619 aa1.72□□□□□ -2.13
SEC22YLR268W DCC1P25559 380 aa1.71□□□□□ -2.14
SEC22YLR268W KRR1P25586 316 aaPredicted RBP1.71□□□□□ -2.14
SEC22YLR268W URA10P30402 227 aa1.71□□□□□ -2.14
SEC22YLR268W PDC2P32896 925 aa1.71□□□□□ -2.14
SEC22YLR268W YKL071WP36086 256 aa1.71□□□□□ -2.14
SEC22YLR268W PCH2P38126 564 aa1.71□□□□□ -2.14
SEC22YLR268W CHL4P38907 458 aa1.71□□□□□ -2.14
SEC22YLR268W POP2P39008 433 aa1.71□□□□□ -2.14
SEC22YLR268W BTT1P40314 149 aaPredicted RBP1.71□□□□□ -2.14
SEC22YLR268W YJR054WP47114 497 aa1.71□□□□□ -2.14
SEC22YLR268W NAS6P50086 228 aa1.71□□□□□ -2.14
SEC22YLR268W VEL1P53058 206 aa1.71□□□□□ -2.14
SEC22YLR268W YGR018CP53211 109 aa1.71□□□□□ -2.14
SEC22YLR268W SUR7P54003 302 aa1.71□□□□□ -2.14
SEC22YLR268W DIA1P54005 336 aa1.71□□□□□ -2.14
SEC22YLR268W RPL21AQ02753 160 aaKnown RBP1.71□□□□□ -2.14
SEC22YLR268W MRX11Q03079 207 aa1.71□□□□□ -2.14
SEC22YLR268W MGR3Q04472 501 aa1.71□□□□□ -2.14
SEC22YLR268W BUR2Q05949 395 aa1.71□□□□□ -2.14
SEC22YLR268W DDC1Q08949 612 aa1.71□□□□□ -2.14
SEC22YLR268W MMT2Q08970 484 aa1.71□□□□□ -2.14
SEC22YLR268W YDR262WQ12331 272 aa1.71□□□□□ -2.14
SEC22YLR268W RAX2Q12465 1220 aa1.71□□□□□ -2.14
SEC22YLR268W STF1P01098 86 aa1.7□□□□□ -2.14
SEC22YLR268W CDC37P06101 506 aaKnown RBP1.7□□□□□ -2.14
SEC22YLR268W RPS19AP07280 144 aaKnown RBP1.7□□□□□ -2.14
SEC22YLR268W RPS19BP07281 144 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms