RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C YNR068CP53754 272 aa1.97□□□□□ -2.09
AFB1YLR040C SFG1Q12507 346 aa1.97□□□□□ -2.09
AFB1YLR040C UBA3Q99344 299 aa1.97□□□□□ -2.09
AFB1YLR040C FUS3P16892 353 aaKnown RBP1.96□□□□□ -2.1
AFB1YLR040C CKI1P20485 582 aa1.96□□□□□ -2.1
AFB1YLR040C GRR1P24814 1151 aa1.96□□□□□ -2.1
AFB1YLR040C AGA2P32781 87 aa1.96□□□□□ -2.1
AFB1YLR040C PTK1P36002 662 aaPredicted RBP1.96□□□□□ -2.1
AFB1YLR040C FRM2P37261 193 aa1.96□□□□□ -2.1
AFB1YLR040C YBL028CP38202 106 aa1.96□□□□□ -2.1
AFB1YLR040C YPT35P38815 214 aaKnown RBP1.96□□□□□ -2.1
AFB1YLR040C FRT2P39734 528 aa1.96□□□□□ -2.1
AFB1YLR040C MOB2P43563 287 aa1.96□□□□□ -2.1
AFB1YLR040C LST7P53237 242 aa1.96□□□□□ -2.1
AFB1YLR040C UTP6Q02354 440 aaKnown RBP1.96□□□□□ -2.1
AFB1YLR040C SMP3Q04174 516 aa1.96□□□□□ -2.1
AFB1YLR040C API2Q04413 109 aa1.96□□□□□ -2.1
AFB1YLR040C YOL029CQ08187 201 aa1.96□□□□□ -2.1
AFB1YLR040C RPL6BP05739 176 aaKnown RBP1.95□□□□□ -2.1
AFB1YLR040C COX10P21592 462 aa1.95□□□□□ -2.1
AFB1YLR040C UBA1P22515 1024 aaKnown RBP1.95□□□□□ -2.1
AFB1YLR040C PUP2P32379 260 aa1.95□□□□□ -2.1
AFB1YLR040C IME2P32581 645 aa1.95□□□□□ -2.1
AFB1YLR040C GGC1P38988 300 aa1.95□□□□□ -2.1
AFB1YLR040C JEM1P40358 645 aa1.95□□□□□ -2.1
AFB1YLR040C SED5Q01590 340 aa1.95□□□□□ -2.1
AFB1YLR040C RPL6AQ02326 176 aaKnown RBP1.95□□□□□ -2.1
AFB1YLR040C MRX8Q05473 314 aa1.95□□□□□ -2.1
AFB1YLR040C FLO11P08640 1367 aa1.95□□□□□ -2.1
AFB1YLR040C STE2D6VTK4 431 aa1.94□□□□□ -2.1
AFB1YLR040C BGL2P15703 313 aaKnown RBP1.94□□□□□ -2.1
AFB1YLR040C ZIP1P31111 875 aa1.94□□□□□ -2.1
AFB1YLR040C MKK1P32490 508 aa1.94□□□□□ -2.1
AFB1YLR040C IST2P38250 946 aa1.94□□□□□ -2.1
AFB1YLR040C RXT2P38255 430 aa1.94□□□□□ -2.1
AFB1YLR040C TRR2P38816 342 aa1.94□□□□□ -2.1
AFB1YLR040C YCH1P42937 148 aa1.94□□□□□ -2.1
AFB1YLR040C CPR7P47103 393 aa1.94□□□□□ -2.1
AFB1YLR040C IGO1P53897 168 aa1.94□□□□□ -2.1
AFB1YLR040C TAF10Q12030 206 aa1.94□□□□□ -2.1
AFB1YLR040C RPN6Q12377 434 aa1.94□□□□□ -2.1
AFB1YLR040C FRE6Q12473 712 aa1.94□□□□□ -2.1
AFB1YLR040C UTR1P21373 530 aa1.93□□□□□ -2.1
AFB1YLR040C MXR2P25566 168 aa1.93□□□□□ -2.1
AFB1YLR040C MRPS5P33759 307 aa1.93□□□□□ -2.1
AFB1YLR040C TIP20P33891 701 aa1.93□□□□□ -2.1
AFB1YLR040C ADH5P38113 351 aaKnown RBP1.93□□□□□ -2.1
AFB1YLR040C TAE1P38340 232 aa1.93□□□□□ -2.1
AFB1YLR040C RBG1P39729 369 aa1.93□□□□□ -2.1
AFB1YLR040C LSG1P53145 640 aaKnown RBP1.93□□□□□ -2.1
AFB1YLR040C MPS2P53159 387 aa1.93□□□□□ -2.1
AFB1YLR040C ZRG17P53735 605 aa1.93□□□□□ -2.1
AFB1YLR040C CSM3Q04659 317 aa1.93□□□□□ -2.1
AFB1YLR040C NAT4Q04751 285 aa1.93□□□□□ -2.1
AFB1YLR040C ALE1Q08548 619 aa1.93□□□□□ -2.1
AFB1YLR040C MMT2Q08970 484 aa1.93□□□□□ -2.1
AFB1YLR040C YDR018CQ12185 396 aa1.93□□□□□ -2.1
AFB1YLR040C SKS1Q12505 502 aa1.93□□□□□ -2.1
AFB1YLR040C TFB5Q3E7C1 72 aaPredicted RBP1.93□□□□□ -2.1
AFB1YLR040C THR4P16120 514 aaKnown RBP1.92□□□□□ -2.1
AFB1YLR040C SAG1P20840 650 aa1.92□□□□□ -2.1
AFB1YLR040C RDS1P25611 832 aa1.92□□□□□ -2.1
AFB1YLR040C URA10P30402 227 aa1.92□□□□□ -2.1
AFB1YLR040C SKG6P32900 734 aaPredicted RBP1.92□□□□□ -2.1
AFB1YLR040C YIR035CP40579 254 aa1.92□□□□□ -2.1
AFB1YLR040C UFE1P41834 346 aa1.92□□□□□ -2.1
AFB1YLR040C INP2Q03824 705 aa1.92□□□□□ -2.1
AFB1YLR040C YDL211CQ12121 372 aa1.92□□□□□ -2.1
AFB1YLR040C SAL1D6W196 494 aa1.91□□□□□ -2.1
AFB1YLR040C RAD1P06777 1100 aa1.91□□□□□ -2.1
AFB1YLR040C ARF2P19146 181 aaKnown RBP1.91□□□□□ -2.1
AFB1YLR040C RAD23P32628 398 aaKnown RBP1.91□□□□□ -2.1
AFB1YLR040C AST1P35183 429 aa1.91□□□□□ -2.1
AFB1YLR040C DAD2P36162 133 aa1.91□□□□□ -2.1
AFB1YLR040C COS4P43542 379 aa1.91□□□□□ -2.1
AFB1YLR040C YHC3P47040 408 aa1.91□□□□□ -2.1
AFB1YLR040C RPN14P53196 417 aa1.91□□□□□ -2.1
AFB1YLR040C YMR244WQ04018 355 aa1.91□□□□□ -2.1
AFB1YLR040C STE3P06783 470 aa1.9□□□□□ -2.11
AFB1YLR040C MAS1P10507 462 aa1.9□□□□□ -2.11
AFB1YLR040C CBF5P33322 483 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
AFB1YLR040C IML3P38265 245 aa1.9□□□□□ -2.11
AFB1YLR040C GDT1P38301 280 aaPredicted RBP1.9□□□□□ -2.11
AFB1YLR040C BDH1P39714 382 aa1.9□□□□□ -2.11
AFB1YLR040C YNL320WP42840 284 aa1.9□□□□□ -2.11
AFB1YLR040C YFR018CP43599 363 aa1.9□□□□□ -2.11
AFB1YLR040C INP1Q03694 420 aa1.9□□□□□ -2.11
AFB1YLR040C YMR310CQ04867 317 aaPredicted RBP1.9□□□□□ -2.11
AFB1YLR040C APC5Q08683 685 aa1.9□□□□□ -2.11
AFB1YLR040C GLE1Q12315 538 aa1.9□□□□□ -2.11
AFB1YLR040C CKA2P19454 339 aa1.89□□□□□ -2.11
AFB1YLR040C RPB9P27999 122 aa1.89□□□□□ -2.11
AFB1YLR040C SRB2P34162 210 aa1.89□□□□□ -2.11
AFB1YLR040C YHR122WP38829 231 aa1.89□□□□□ -2.11
AFB1YLR040C RPA34P47006 233 aaPredicted RBP1.89□□□□□ -2.11
AFB1YLR040C NAS6P50086 228 aa1.89□□□□□ -2.11
AFB1YLR040C TPC1P53257 314 aa1.89□□□□□ -2.11
AFB1YLR040C NRM1P53718 249 aa1.89□□□□□ -2.11
AFB1YLR040C PRM1P53835 661 aa1.89□□□□□ -2.11
AFB1YLR040C YNL143CP53908 130 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms