RNA–Protein interactions for RNA: YLL035W

GRC3, Transcript of Polynucleotide kinase present on rDNA, yeast

Gene GRC3, Length 1,899 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GRC3	YLL035W	SLC1	P33333	303 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	WBP1	P33767	430 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	SNU114	P36048	1008 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	MRPL4	P36517	319 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	SRO77	P38163	1010 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	RRN10	P38204	145 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	AXL2	P38928	823 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	YEL076C	P39971	216 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	SLZ1	P40167	298 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	SWM2	P40342	146 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	PAN6	P40459	309 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	GAT1	P43574	510 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	AIM22	P47051	409 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	YJR111C	P47148	283 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	MCM22	P47167	239 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	MNN10	P50108	393 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	YGR017W	P53210	297 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	NQM1	P53228	333 aa	Predicted RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	TIM13	P53299	105 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	SAE3	P89114	91 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	REG1	Q00816	1014 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	CTL1	Q03220	320 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	LRS4	Q04087	347 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	SEN15	Q04675	128 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	YDR222W	Q04925	415 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	MFG1	Q07684	458 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	LDB18	Q07887	179 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	YDL176W	Q12027	708 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	YDR018C	Q12185	396 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	INP53	Q12271	1107 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	PFK27	Q12471	397 aa	Predicted RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	VMA9	Q3E7B6	73 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	MEX67	Q99257	599 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	Q0142	Q9ZZW4	58 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	RPL9A	P05738	191 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	HEM13	P11353	328 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	SPO7	P18410	259 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	GID7	P25569	745 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	TAH1	P25638	111 aa	Predicted RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
GRC3	YLL035W	PEX4	P29340	183 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	APE3	P37302	537 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	MNL1	P38888	796 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	GLC8	P41818	229 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	PRM10	P42946	383 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	YFL040W	P43562	540 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	PHO86	P46956	311 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	YAE1	P47118	141 aa	Predicted RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	PUS4	P48567	403 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	SOL1	P50278	321 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	RPL9B	P51401	191 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	NBP35	P52920	328 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	RPA49	Q01080	415 aa	Predicted RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	TRM12	Q04235	462 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	MRI1	Q06489	411 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	GPI11	Q06636	219 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	ECM30	Q06673	1274 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	MED7	Q08278	222 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	MET32	Q12041	191 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	YPL245W	Q12179	454 aa	Known RBP	4.18	□□□□□ -1.74
GRC3	YLL035W	FRE6	Q12473	712 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	KCS1	Q12494	1050 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	YPR145C-A	Q2V2P0	78 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	SUS1	Q6WNK7	96 aa		4.18	□□□□□ -1.74
GRC3	YLL035W	PRC1	P00729	532 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	DST1	P07273	309 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	ALG7	P07286	448 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	ATP5	P09457	212 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	REV1	P12689	985 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	HOP1	P20050	605 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	MAG1	P22134	296 aa	Known RBP	4.17	□□□□□ -1.74
GRC3	YLL035W	EMP24	P32803	203 aa	Known RBP	4.17	□□□□□ -1.74
GRC3	YLL035W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
GRC3	YLL035W	APL3	P38065	1025 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	ATG8	P38182	117 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
GRC3	YLL035W	FAD1	P38913	306 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	FET3	P38993	636 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	KHA1	P40309	873 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	YIL161W	P40449	235 aa	Known RBP	4.17	□□□□□ -1.74
GRC3	YLL035W	YJL218W	P40892	196 aa	Known RBP	4.17	□□□□□ -1.74
GRC3	YLL035W	SMK1	P41808	388 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	TAX4	P47030	604 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	YJR154W	P47181	346 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	ALT2	P52892	507 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	YPL014W	Q02606	381 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	MRP51	Q02950	344 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	SNO1	Q03144	224 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	SKY1	Q03656	742 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	CUE4	Q04201	117 aa	Predicted RBP	4.17	□□□□□ -1.74
GRC3	YLL035W	DFG5	Q05031	458 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	YLR455W	Q06188	304 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	RIF2	Q06208	395 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	RRG7	Q08774	242 aa	Predicted RBP	4.17	□□□□□ -1.74
GRC3	YLL035W	RAD28	Q12021	506 aa		4.17	□□□□□ -1.74
GRC3	YLL035W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.17	□□□□□ -1.74
GRC3	YLL035W	HAP2	P06774	265 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	RHO2	P06781	192 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	CDC33	P07260	213 aa	Known RBP	4.16	□□□□□ -1.74
GRC3	YLL035W	SEC59	P20048	519 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	MSN1	P22148	382 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms