RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	NUP2	P32499	720 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	ZRT1	P32804	376 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	PRS4	P38063	326 aa	Predicted RBP	3.91	□□□□□ -1.78
VMA22	YHR060W	MAL32	P38158	584 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	ALG8	P40351	577 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	YRB2	P40517	327 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	AZF1	P41696	914 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	DIM1	P41819	318 aa	Known RBP	3.91	□□□□□ -1.78
VMA22	YHR060W	MAL12	P53341	584 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	HCH1	P53834	153 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	YMR209C	Q03648	457 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	YLR281C	Q05863	155 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	OSW1	Q08692	278 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	APC9	Q12107	265 aa		3.91	□□□□□ -1.78
VMA22	YHR060W	ATP6	P00854	259 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	ILV1	P00927	576 aa	Known RBP	3.9	□□□□□ -1.79
VMA22	YHR060W	CDC36	P06100	191 aa	Predicted RBP	3.9	□□□□□ -1.79
VMA22	YHR060W	SSC1	P0CS90	654 aa	Known RBP	3.9	□□□□□ -1.79
VMA22	YHR060W	COQ1	P18900	473 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	SAM2	P19358	384 aa	Known RBP	3.9	□□□□□ -1.79
VMA22	YHR060W	PTR2	P32901	601 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	ARC19	P33204	171 aa	Known RBP	3.9	□□□□□ -1.79
VMA22	YHR060W	RPC37	P36121	282 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	GPX2	P38143	162 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	RIB5	P38145	238 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	FLO5	P38894	1075 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	COX14	P39103	70 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	YER034W	P40022	185 aa	Known RBP	3.9	□□□□□ -1.79
VMA22	YHR060W	DFG10	P40526	253 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	YJR030C	P47101	745 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	AVT4	P50944	713 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	IBD2	P53892	351 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	YPL080C	Q02826	108 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	CSM3	Q04659	317 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	THI7	Q05998	598 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	SDO1	Q07953	250 aa	Known RBP	3.9	□□□□□ -1.79
VMA22	YHR060W	SNX3	Q08826	162 aa	Known RBP	3.9	□□□□□ -1.79
VMA22	YHR060W	PLP2	Q12017	286 aa		3.9	□□□□□ -1.79
VMA22	YHR060W	ADH2	P00331	348 aa	Known RBP	3.89	□□□□□ -1.79
VMA22	YHR060W	HIS1	P00498	297 aa	Known RBP	3.89	□□□□□ -1.79
VMA22	YHR060W	PGK1	P00560	416 aa	Known RBP	3.89	□□□□□ -1.79
VMA22	YHR060W	HPR1	P17629	752 aa	Known RBP	3.89	□□□□□ -1.79
VMA22	YHR060W	SLY1	P22213	666 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	MBR1	P23493	339 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	ASF2	P32448	525 aa	Predicted RBP	3.89	□□□□□ -1.79
VMA22	YHR060W	KAR9	P32526	644 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	MGM101	P32787	269 aa	Known RBP	3.89	□□□□□ -1.79
VMA22	YHR060W	BIG1	P38813	335 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	HAT2	P39984	401 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	YIA6	P40556	373 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	YNL320W	P42840	284 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	GAT1	P43574	510 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	RTT101	P47050	842 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	PIR3	Q03180	325 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	MYO5	Q04439	1219 aa	Known RBP	3.89	□□□□□ -1.79
VMA22	YHR060W	YMR226C	Q05016	267 aa	Known RBP	3.89	□□□□□ -1.79
VMA22	YHR060W	ASR1	Q06834	288 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	YOR029W	Q12243	111 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	PCL9	Q12477	304 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	NCB2	Q92317	146 aa		3.89	□□□□□ -1.79
VMA22	YHR060W	ARG80	P07249	177 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	MTF1	P14908	341 aa	Known RBP	3.88	□□□□□ -1.79
VMA22	YHR060W	AIM17	P23180	465 aa	Known RBP	3.88	□□□□□ -1.79
VMA22	YHR060W	YCP4	P25349	247 aa	Known RBP	3.88	□□□□□ -1.79
VMA22	YHR060W	TRS65	P32893	560 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	YKL063C	P35725	167 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	DHH1	P39517	506 aa	Known RBP	3.88	□□□□□ -1.79
VMA22	YHR060W	DDI1	P40087	428 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	YIL169C	P40442	995 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	MAM33	P40513	266 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	HIT1	P46973	164 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	IKS1	P47042	667 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	TAD2	P47058	250 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	SWC4	P53201	476 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	ARK1	P53974	638 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	RTN1	Q04947	295 aa	Known RBP	3.88	□□□□□ -1.79
VMA22	YHR060W	GAT3	Q07928	141 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	DAP1	Q12091	152 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	GET4	Q12125	312 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	RRP42	Q12277	265 aa	Predicted RBP	3.88	□□□□□ -1.79
VMA22	YHR060W	SEY1	Q99287	776 aa		3.88	□□□□□ -1.79
VMA22	YHR060W	DET1	Q99288	334 aa	Known RBP	3.88	□□□□□ -1.79
VMA22	YHR060W	PIS1	P06197	220 aa	Known RBP	3.87	□□□□□ -1.79
VMA22	YHR060W	REV1	P12689	985 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	ATR1	P13090	542 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	CTA1	P15202	515 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	GLN3	P18494	730 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	PBN1	P25580	416 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	CSE1	P33307	960 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	SLX1	P38324	304 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	MTC6	P38849	526 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	COA1	P40452	197 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	YIR016W	P40572	265 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	YRB1	P41920	201 aa	Known RBP	3.87	□□□□□ -1.79
VMA22	YHR060W	RRT5	P43607	289 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	MDV1	P47025	714 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	RAD17	P48581	401 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	SLT2	Q00772	484 aa		3.87	□□□□□ -1.79
VMA22	YHR060W	ENT5	Q03769	411 aa	Known RBP	3.87	□□□□□ -1.79
VMA22	YHR060W	YMR027W	Q04371	470 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms