RNA–Protein interactions for RNA: YHL009W-B

YHL009W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHL009W-B, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-BYHL009W-B SFG1Q12507 346 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YPL119C-AQ3E751 87 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YEL009C-AA0A023PZF2 135 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B MRP1P10662 321 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B AHT1P29589 182 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B TPS2P31688 896 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B MSS1P32559 526 aaPredicted RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B VPS17P32913 551 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B SPT4P32914 102 aaPredicted RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B RRP1P35178 278 aaPredicted RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B SWD2P36104 329 aaPredicted RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B LAS1P36146 502 aaPredicted RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YBR063CP38083 404 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B ENP1P38333 483 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B CUE1P38428 203 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YHR035WP38769 630 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YAR064WP39563 99 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B UFD1P53044 361 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B TPN1P53099 579 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YGL081WP53156 320 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B RRN11Q04712 507 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B RIF2Q06208 395 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B CBP2P03874 630 aaPredicted RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B ATP1P07251 545 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B RPL31BP0C2H9 113 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B MRS4P23500 304 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B AAT2P23542 418 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B SCO1P23833 295 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B ITR2P30606 609 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B PSO2P30620 661 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B DPH5P32469 300 aaPredicted RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B MEI5P32489 222 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B PTM1P32857 523 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B PAD1P33751 242 aaKnown RBP RIP-Chip data-0.7□□□□□ -2.52not detected
YHL009W-BYHL009W-B MRPL3P36516 390 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B SSZ1P38788 538 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B SPT8P38915 602 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YNL194CP40169 301 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B DSN1P40568 576 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YIR035CP40579 254 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B TDA10P42938 290 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B RPS10BP46784 105 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B TAD2P47058 250 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B MPP10P47083 593 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B BRO1P48582 844 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YGL117WP53133 265 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B UTP8P53276 713 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B CWC25P53854 179 aaKnown RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YNL181WP53878 407 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B MZM1Q03429 123 aaPredicted RBP-0.7□□□□□ -2.52
YHL009W-BYHL009W-B SCS7Q03529 384 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YKU80Q04437 629 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B YDL144CQ07589 356 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B RRD2Q12461 358 aa-0.7□□□□□ -2.52
YHL009W-BYHL009W-B TUF1P02992 437 aaKnown RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B LEU3P08638 886 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B RPL18AP0CX49 186 aaKnown RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B RPL18BP0CX50 186 aaKnown RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B URA10P30402 227 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B CTF13P35203 478 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B SRY1P36007 326 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B FRM2P37261 193 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B COX14P39103 70 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B RFC4P40339 323 aaKnown RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B SLM1P40485 686 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B NMD5P46970 1048 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B YJR154WP47181 346 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B VPS4P52917 437 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B IBD2P53892 351 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B ERG5P54781 538 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B YDR274CP87283 123 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B SLT2Q00772 484 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B STD1Q02794 444 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B ARR3Q06598 404 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B FEX1Q08913 375 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B FEX2Q08991 375 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B YLR126CQ12288 251 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B DET1Q99288 334 aaKnown RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B FAB1P34756 2278 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B MSF1P08425 469 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B YOL162WP0CF19 215 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B CPT1P17898 393 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B ALK2P32789 676 aaPredicted RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B MTC2P34246 357 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B MRX3P38172 270 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B YER130CP39959 443 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B ECM10P39987 644 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B SNX4P47057 423 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B COG6P53959 839 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B EBS1Q03466 884 aaKnown RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B URC2Q04411 772 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B SPG4Q04438 115 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B ARP10Q04549 284 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B CMS1Q07897 291 aaKnown RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B RRP40Q08285 240 aaKnown RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B DNL4Q08387 944 aaPredicted RBP-0.71□□□□□ -2.52
YHL009W-BYHL009W-B DDC1Q08949 612 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B DCN1Q12395 269 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B YSP2Q06681 1438 aa-0.71□□□□□ -2.52
YHL009W-BYHL009W-B TRP4P07285 380 aaPredicted RBP-0.71□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms