RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C MTC6P38849 526 aa3.12□□□□□ -1.91
MSM1YGR171C COX16P47081 118 aa3.12□□□□□ -1.91
MSM1YGR171C KAP114P53067 1004 aa3.12□□□□□ -1.91
MSM1YGR171C YGR168CP53293 376 aa3.12□□□□□ -1.91
MSM1YGR171C SPP2Q02521 185 aa3.12□□□□□ -1.91
MSM1YGR171C RVB1Q03940 463 aaKnown RBP3.12□□□□□ -1.91
MSM1YGR171C THP3Q12049 470 aaKnown RBP3.12□□□□□ -1.91
MSM1YGR171C SIA1Q12212 622 aa3.12□□□□□ -1.91
MSM1YGR171C CFT1Q06632 1357 aaKnown RBP3.12□□□□□ -1.91
MSM1YGR171C PAB1P04147 577 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
MSM1YGR171C SSC1P0CS90 654 aaKnown RBP3.11□□□□□ -1.91
MSM1YGR171C RPS16AP0CX51 143 aaKnown RBP3.11□□□□□ -1.91
MSM1YGR171C RPS16BP0CX52 143 aaKnown RBP3.11□□□□□ -1.91
MSM1YGR171C CKI1P20485 582 aa3.11□□□□□ -1.91
MSM1YGR171C AGA1P32323 725 aa3.11□□□□□ -1.91
MSM1YGR171C MUD1P32605 298 aaKnown RBP3.11□□□□□ -1.91
MSM1YGR171C MAL32P38158 584 aa3.11□□□□□ -1.91
MSM1YGR171C YBR137WP38276 179 aa3.11□□□□□ -1.91
MSM1YGR171C FHL1P39521 936 aa3.11□□□□□ -1.91
MSM1YGR171C JLP2P40206 208 aa3.11□□□□□ -1.91
MSM1YGR171C MEP2P41948 499 aa3.11□□□□□ -1.91
MSM1YGR171C YFL067WP43537 175 aa3.11□□□□□ -1.91
MSM1YGR171C MAL12P53341 584 aa3.11□□□□□ -1.91
MSM1YGR171C WSC2P53832 503 aa3.11□□□□□ -1.91
MSM1YGR171C GMC2Q06201 188 aa3.11□□□□□ -1.91
MSM1YGR171C NDE2Q07500 545 aa3.11□□□□□ -1.91
MSM1YGR171C SAM4Q08985 325 aaKnown RBP3.11□□□□□ -1.91
MSM1YGR171C MSF1P08425 469 aa3.1□□□□□ -1.91
MSM1YGR171C PRB1P09232 635 aa3.1□□□□□ -1.91
MSM1YGR171C MRP1P10662 321 aaKnown RBP3.1□□□□□ -1.91
MSM1YGR171C GPI12P23797 304 aa3.1□□□□□ -1.91
MSM1YGR171C PPA2P28239 310 aa3.1□□□□□ -1.91
MSM1YGR171C DEG1P31115 442 aaKnown RBP3.1□□□□□ -1.91
MSM1YGR171C ASF2P32448 525 aaPredicted RBP3.1□□□□□ -1.91
MSM1YGR171C HIS2P38635 335 aa3.1□□□□□ -1.91
MSM1YGR171C GEP4P38812 185 aa3.1□□□□□ -1.91
MSM1YGR171C FET3P38993 636 aa3.1□□□□□ -1.91
MSM1YGR171C BTT1P40314 149 aaPredicted RBP3.1□□□□□ -1.91
MSM1YGR171C TIM21P53220 239 aa3.1□□□□□ -1.91
MSM1YGR171C RTC4P53850 401 aa3.1□□□□□ -1.91
MSM1YGR171C SMP3Q04174 516 aa3.1□□□□□ -1.91
MSM1YGR171C YLR283WQ05867 314 aa3.1□□□□□ -1.91
MSM1YGR171C CTS2Q06350 511 aa3.1□□□□□ -1.91
MSM1YGR171C BSC6Q08280 497 aa3.1□□□□□ -1.91
MSM1YGR171C GIS3Q12418 502 aa3.1□□□□□ -1.91
MSM1YGR171C YBL111CQ3E7Y5 667 aa3.1□□□□□ -1.91
MSM1YGR171C YBR298C-AQ8TGK4 73 aa3.1□□□□□ -1.91
MSM1YGR171C CDC36P06100 191 aaPredicted RBP3.1□□□□□ -1.91
MSM1YGR171C HEM15P16622 393 aa3.1□□□□□ -1.91
MSM1YGR171C RPL24BP24000 155 aaKnown RBP3.1□□□□□ -1.91
MSM1YGR171C ZIP1P31111 875 aa3.1□□□□□ -1.91
MSM1YGR171C VAM7P32912 316 aa3.1□□□□□ -1.91
MSM1YGR171C TIR2P33890 251 aa3.1□□□□□ -1.91
MSM1YGR171C GPX2P38143 162 aa3.1□□□□□ -1.91
MSM1YGR171C IDP2P41939 412 aa3.1□□□□□ -1.91
MSM1YGR171C SCS3P53012 380 aa3.1□□□□□ -1.91
MSM1YGR171C MSO1P53604 210 aaKnown RBP3.1□□□□□ -1.91
MSM1YGR171C TRM112P53738 135 aaPredicted RBP3.1□□□□□ -1.91
MSM1YGR171C KTR6P54070 446 aa3.1□□□□□ -1.91
MSM1YGR171C UBX2Q04228 584 aa3.1□□□□□ -1.91
MSM1YGR171C ADH6Q04894 360 aaKnown RBP3.1□□□□□ -1.91
MSM1YGR171C YMR226CQ05016 267 aaKnown RBP3.1□□□□□ -1.91
MSM1YGR171C PAM18Q07914 168 aa3.1□□□□□ -1.91
MSM1YGR171C YLR108CQ12259 485 aa3.1□□□□□ -1.91
MSM1YGR171C SEY1Q99287 776 aa3.1□□□□□ -1.91
MSM1YGR171C UBA3Q99344 299 aa3.1□□□□□ -1.91
MSM1YGR171C NHP6BP11633 99 aaKnown RBP3.09□□□□□ -1.91
MSM1YGR171C ARF2P19146 181 aaKnown RBP3.09□□□□□ -1.91
MSM1YGR171C DAL82P21705 255 aa3.09□□□□□ -1.91
MSM1YGR171C RBK1P25332 333 aa3.09□□□□□ -1.91
MSM1YGR171C RVS161P25343 265 aaKnown RBP3.09□□□□□ -1.91
MSM1YGR171C MXR2P25566 168 aa3.09□□□□□ -1.91
MSM1YGR171C ACB1P31787 87 aa3.09□□□□□ -1.91
MSM1YGR171C MYO3P36006 1272 aa3.09□□□□□ -1.91
MSM1YGR171C AIM29P36154 155 aa3.09□□□□□ -1.91
MSM1YGR171C IML3P38265 245 aa3.09□□□□□ -1.91
MSM1YGR171C COX14P39103 70 aa3.09□□□□□ -1.91
MSM1YGR171C COX20Q04935 205 aa3.09□□□□□ -1.91
MSM1YGR171C RTT103Q05543 409 aa3.09□□□□□ -1.91
MSM1YGR171C ARR2Q06597 130 aa3.09□□□□□ -1.91
MSM1YGR171C BER1Q06688 274 aaKnown RBP3.09□□□□□ -1.91
MSM1YGR171C HNT3Q08702 217 aa3.09□□□□□ -1.91
MSM1YGR171C GET4Q12125 312 aa3.09□□□□□ -1.91
MSM1YGR171C ERP3Q12403 225 aa3.09□□□□□ -1.91
MSM1YGR171C PRP46Q12417 451 aaPredicted RBP3.09□□□□□ -1.91
MSM1YGR171C IKI3Q06706 1349 aaKnown RBP3.09□□□□□ -1.92
MSM1YGR171C JIP3O13555 125 aa3.08□□□□□ -1.92
MSM1YGR171C COQ1P18900 473 aa3.08□□□□□ -1.92
MSM1YGR171C ITR2P30606 609 aa3.08□□□□□ -1.92
MSM1YGR171C PHA2P32452 334 aa3.08□□□□□ -1.92
MSM1YGR171C ECM4P36156 370 aa3.08□□□□□ -1.92
MSM1YGR171C YHK8P38776 514 aa3.08□□□□□ -1.92
MSM1YGR171C NCA3P46955 337 aa3.08□□□□□ -1.92
MSM1YGR171C ABM1P47146 123 aa3.08□□□□□ -1.92
MSM1YGR171C COS1P53822 381 aa3.08□□□□□ -1.92
MSM1YGR171C NAT4Q04751 285 aa3.08□□□□□ -1.92
MSM1YGR171C YMR230W-AQ3E7B5 62 aa3.08□□□□□ -1.92
MSM1YGR171C CWP1P28319 239 aa3.07□□□□□ -1.92
MSM1YGR171C ZUO1P32527 433 aaKnown RBP3.07□□□□□ -1.92
MSM1YGR171C GCG1P32656 232 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms