RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C MRPS9P38120 278 aa2.59□□□□□ -1.99
VAB2YEL005C MRP21P38175 177 aa2.59□□□□□ -1.99
VAB2YEL005C YMR134WP40207 237 aa2.59□□□□□ -1.99
VAB2YEL005C TPS1Q00764 495 aaKnown RBP2.59□□□□□ -1.99
VAB2YEL005C SRO7Q12038 1033 aa2.59□□□□□ -1.99
VAB2YEL005C RPS16AP0CX51 143 aaKnown RBP2.58□□□□□ -2
VAB2YEL005C RPS16BP0CX52 143 aaKnown RBP2.58□□□□□ -2
VAB2YEL005C UNG1P12887 359 aa2.58□□□□□ -2
VAB2YEL005C TPM1P17536 199 aaKnown RBP2.58□□□□□ -2
VAB2YEL005C FAR1P21268 830 aa2.58□□□□□ -2
VAB2YEL005C IST2P38250 946 aa2.58□□□□□ -2
VAB2YEL005C YHR122WP38829 231 aa2.58□□□□□ -2
VAB2YEL005C ATG7P38862 630 aa2.58□□□□□ -2
VAB2YEL005C MOB2P43563 287 aa2.58□□□□□ -2
VAB2YEL005C FYV8P46949 817 aaKnown RBP2.58□□□□□ -2
VAB2YEL005C HIT1P46973 164 aa2.58□□□□□ -2
VAB2YEL005C BIO3P50277 480 aa2.58□□□□□ -2
VAB2YEL005C VHT1P53241 593 aa2.58□□□□□ -2
VAB2YEL005C HCH1P53834 153 aa2.58□□□□□ -2
VAB2YEL005C VAC7P53950 1165 aa2.58□□□□□ -2
VAB2YEL005C ECM11Q04110 302 aa2.58□□□□□ -2
VAB2YEL005C TSA2Q04120 196 aa2.58□□□□□ -2
VAB2YEL005C YPQ1Q12010 308 aa2.58□□□□□ -2
VAB2YEL005C RBK1P25332 333 aa2.57□□□□□ -2
VAB2YEL005C KRR1P25586 316 aaPredicted RBP2.57□□□□□ -2
VAB2YEL005C URA10P30402 227 aa2.57□□□□□ -2
VAB2YEL005C ITR2P30606 609 aa2.57□□□□□ -2
VAB2YEL005C VMA5P31412 392 aaKnown RBP2.57□□□□□ -2
VAB2YEL005C MKK1P32490 508 aa2.57□□□□□ -2
VAB2YEL005C ZUO1P32527 433 aaKnown RBP2.57□□□□□ -2
VAB2YEL005C SRB2P34162 210 aa2.57□□□□□ -2
VAB2YEL005C IML3P38265 245 aa2.57□□□□□ -2
VAB2YEL005C STB1P42845 420 aa2.57□□□□□ -2
VAB2YEL005C SHE4P51534 789 aa2.57□□□□□ -2
VAB2YEL005C VEL1P53058 206 aa2.57□□□□□ -2
VAB2YEL005C CDH1P53197 566 aa2.57□□□□□ -2
VAB2YEL005C CSM3Q04659 317 aa2.57□□□□□ -2
VAB2YEL005C SOD1P00445 154 aaKnown RBP2.56□□□□□ -2
VAB2YEL005C CBP6P07253 162 aaPredicted RBP2.56□□□□□ -2
VAB2YEL005C UTR1P21373 530 aa2.56□□□□□ -2
VAB2YEL005C EPT1P22140 391 aa2.56□□□□□ -2
VAB2YEL005C ERG9P29704 444 aa2.56□□□□□ -2
VAB2YEL005C ECM34P38728 170 aa2.56□□□□□ -2
VAB2YEL005C YER184CP39961 794 aa2.56□□□□□ -2
VAB2YEL005C BTT1P40314 149 aaPredicted RBP2.56□□□□□ -2
VAB2YEL005C YFL012WP43580 148 aa2.56□□□□□ -2
VAB2YEL005C NRM1P53718 249 aa2.56□□□□□ -2
VAB2YEL005C RPL21AQ02753 160 aaKnown RBP2.56□□□□□ -2
VAB2YEL005C TRM82Q03774 444 aa2.56□□□□□ -2
VAB2YEL005C RVB1Q03940 463 aaKnown RBP2.56□□□□□ -2
VAB2YEL005C DDC1Q08949 612 aa2.56□□□□□ -2
VAB2YEL005C RPS14AP06367 137 aaKnown RBP2.55□□□□□ -2
VAB2YEL005C CTA1P15202 515 aa2.55□□□□□ -2
VAB2YEL005C BGL2P15703 313 aaKnown RBP2.55□□□□□ -2
VAB2YEL005C TOA1P32773 286 aa2.55□□□□□ -2
VAB2YEL005C RPS14BP39516 138 aaKnown RBP2.55□□□□□ -2
VAB2YEL005C HEM14P40012 539 aa2.55□□□□□ -2
VAB2YEL005C NAS2P40555 220 aa2.55□□□□□ -2
VAB2YEL005C YGR015CP53208 328 aa2.55□□□□□ -2
VAB2YEL005C YGR168CP53293 376 aa2.55□□□□□ -2
VAB2YEL005C MRX11Q03079 207 aa2.55□□□□□ -2
VAB2YEL005C MGR3Q04472 501 aa2.55□□□□□ -2
VAB2YEL005C YLR297WQ05899 129 aa2.55□□□□□ -2
VAB2YEL005C SLF1Q12034 447 aaKnown RBP2.55□□□□□ -2
VAB2YEL005C FRE8Q12209 686 aa2.55□□□□□ -2
VAB2YEL005C MCT1Q12283 360 aa2.55□□□□□ -2
VAB2YEL005C YDR262WQ12331 272 aa2.55□□□□□ -2
VAB2YEL005C STE2D6VTK4 431 aa2.54□□□□□ -2
VAB2YEL005C CDC37P06101 506 aaKnown RBP2.54□□□□□ -2
VAB2YEL005C RAD1P06777 1100 aa2.54□□□□□ -2
VAB2YEL005C GAL3P13045 520 aa2.54□□□□□ -2
VAB2YEL005C PMT2P31382 759 aa2.54□□□□□ -2
VAB2YEL005C MEI5P32489 222 aa2.54□□□□□ -2
VAB2YEL005C SPS19P32573 292 aaKnown RBP2.54□□□□□ -2
VAB2YEL005C SHE3P38272 425 aaKnown RBP2.54□□□□□ -2
VAB2YEL005C PEX32P38292 413 aa2.54□□□□□ -2
VAB2YEL005C END3P39013 349 aa2.54□□□□□ -2
VAB2YEL005C FHL1P39521 936 aa2.54□□□□□ -2
VAB2YEL005C SEO1P39709 593 aa2.54□□□□□ -2
VAB2YEL005C ALD5P40047 520 aaKnown RBP2.54□□□□□ -2
VAB2YEL005C TAF6P53040 516 aa2.54□□□□□ -2
VAB2YEL005C LSG1P53145 640 aaKnown RBP2.54□□□□□ -2
VAB2YEL005C BSC6Q08280 497 aa2.54□□□□□ -2
VAB2YEL005C RTC5Q12108 567 aaKnown RBP2.54□□□□□ -2
VAB2YEL005C RPS19AP07280 144 aaKnown RBP2.53□□□□□ -2
VAB2YEL005C RPS19BP07281 144 aaPredicted RBP2.53□□□□□ -2
VAB2YEL005C ACB1P31787 87 aa2.53□□□□□ -2
VAB2YEL005C PDC2P32896 925 aa2.53□□□□□ -2
VAB2YEL005C KTI12P34253 313 aaKnown RBP2.53□□□□□ -2
VAB2YEL005C MRPL27P36526 146 aaPredicted RBP2.53□□□□□ -2
VAB2YEL005C LIN1P38852 340 aaPredicted RBP2.53□□□□□ -2
VAB2YEL005C YJR054WP47114 497 aa2.53□□□□□ -2
VAB2YEL005C NAS6P50086 228 aa2.53□□□□□ -2
VAB2YEL005C FLC3P53121 802 aa2.53□□□□□ -2
VAB2YEL005C ALE1Q08548 619 aa2.53□□□□□ -2
VAB2YEL005C MMT2Q08970 484 aa2.53□□□□□ -2
VAB2YEL005C MHP1P43638 1398 aa2.52□□□□□ -2.01
VAB2YEL005C DCC1P25559 380 aa2.52□□□□□ -2.01
VAB2YEL005C ZIP1P31111 875 aa2.52□□□□□ -2.01
VAB2YEL005C ECT1P33412 323 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms