RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	ENA1	P13587	1091 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	ERD1	P16151	362 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	SNC1	P31109	117 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	HSP150	P32478	413 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	DHR2	P36009	735 aa	Predicted RBP	6.62	□□□□□ -1.35
SKP1	YDR328C	MAE1	P36013	669 aa	Known RBP	6.62	□□□□□ -1.35
SKP1	YDR328C	ARN2	P38724	620 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	SKN7	P38889	622 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	6.62	□□□□□ -1.35	not detected
SKP1	YDR328C	YNL208W	P40159	199 aa	Known RBP	6.62	□□□□□ -1.35
SKP1	YDR328C	CIN1	P40987	1014 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	STB1	P42845	420 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	IDS2	P46958	469 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	YGL101W	P53144	215 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	ENA2	Q01896	1091 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	RSM10	Q03201	203 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	OST6	Q03723	332 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	ARP10	Q04549	284 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	ERB1	Q04660	807 aa	Known RBP	6.62	□□□□□ -1.35
SKP1	YDR328C	SNT309	Q06091	175 aa	Predicted RBP	6.62	□□□□□ -1.35
SKP1	YDR328C	YOR376W	Q08900	122 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	UIP4	Q08926	304 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	MCP1	Q12106	302 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	PNS1	Q12412	539 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	ENA5	Q12691	1091 aa		6.62	□□□□□ -1.35
SKP1	YDR328C	NCP1	P16603	691 aa	Known RBP	6.61	□□□□□ -1.35
SKP1	YDR328C	IDP1	P21954	428 aa	Known RBP	6.61	□□□□□ -1.35
SKP1	YDR328C	CWH43	P25618	953 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	MDL1	P33310	695 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	RTC2	P38279	296 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	RPP1	P38786	293 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	IES5	P40060	125 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	NTA1	P40354	457 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	HXT9	P40885	567 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	YFR054C	P43622	192 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	BUD9	P53226	547 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	CUZ1	P53899	274 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	HXT11	P54862	567 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	EKI1	Q03764	534 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	DCR2	Q05924	578 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	YPQ2	Q06328	317 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	ERF2	Q06551	359 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	GSH2	Q08220	491 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	RAX1	Q08760	435 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	YOR289W	Q12012	251 aa	Predicted RBP	6.61	□□□□□ -1.35
SKP1	YDR328C	YDL007C-A	Q2V2Q0	85 aa		6.61	□□□□□ -1.35
SKP1	YDR328C	HAP4	P14064	554 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	YPK2	P18961	677 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	LDB16	P25587	256 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	RPS5	P26783	225 aa	Known RBP	6.6	□□□□□ -1.35
SKP1	YDR328C	GPX1	P36014	167 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	JEN1	P36035	616 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	MTC4	P38335	694 aa	Known RBP	6.6	□□□□□ -1.35
SKP1	YDR328C	CHL4	P38907	458 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	ZRG8	P40021	1076 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	MDE1	P47095	244 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	YJR098C	P47139	656 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	SHE4	P51534	789 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	NQM1	P53228	333 aa	Predicted RBP	6.6	□□□□□ -1.35
SKP1	YDR328C	YNR062C	P53748	327 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	ATG21	Q02887	496 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	SNZ1	Q03148	297 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	PRP3	Q03338	469 aa	Predicted RBP	6.6	□□□□□ -1.35
SKP1	YDR328C	YLR040C	Q07988	224 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	NTG2	Q08214	380 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	ENB1	Q08299	606 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	YDL109C	Q12103	647 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	HER1	Q12276	1246 aa		6.6	□□□□□ -1.35
SKP1	YDR328C	RPP2B	P02400	110 aa	Known RBP	6.59	□□□□□ -1.35
SKP1	YDR328C	CYT1	P07143	309 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	HSP30	P25619	332 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	NDC1	P32500	655 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	TRS65	P32893	560 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	SEF1	P34228	1148 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	RPS20	P38701	121 aa	Known RBP	6.59	□□□□□ -1.35
SKP1	YDR328C	MDM31	P38880	579 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	YTA6	P40328	754 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	IRC5	P43610	853 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	IRC6	P43615	237 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	IRC7	P43623	340 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	RBL2	P48606	106 aa	Known RBP	6.59	□□□□□ -1.35
SKP1	YDR328C	MPP6	P53725	186 aa	Predicted RBP	6.59	□□□□□ -1.35
SKP1	YDR328C	BUD17	P53727	317 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	DML1	Q03652	475 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	YMR087W	Q04299	284 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	FMP42	Q04991	504 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	CYK3	Q07533	885 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	FMP45	Q07651	309 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	YDL177C	Q12257	170 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	SET6	Q12529	373 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	YGR161W-C	Q3E744	92 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	YOR032W-A	Q8TGS1	66 aa		6.59	□□□□□ -1.35
SKP1	YDR328C	MET2	P08465	486 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
SKP1	YDR328C	PHO80	P20052	293 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	PRP28	P23394	588 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	PUP2	P32379	260 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	YEF1	P32622	495 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	SUR1	P33300	382 aa		6.58	□□□□□ -1.36
SKP1	YDR328C	MSN4	P33749	630 aa		6.58	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms