RNA–Protein interactions for RNA: YDR257C

RKM4, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM4, Length 1,485 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM4	YDR257C	GCD2	P12754	651 aa	Predicted RBP	4.25	□□□□□ -1.73
RKM4	YDR257C	DCC1	P25559	380 aa		4.25	□□□□□ -1.73
RKM4	YDR257C	VMA5	P31412	392 aa	Known RBP	4.25	□□□□□ -1.73
RKM4	YDR257C	PCH2	P38126	564 aa		4.25	□□□□□ -1.73
RKM4	YDR257C	END3	P39013	349 aa		4.25	□□□□□ -1.73
RKM4	YDR257C	AIM20	P40451	204 aa		4.25	□□□□□ -1.73
RKM4	YDR257C	ABZ2	Q03266	374 aa		4.25	□□□□□ -1.73
RKM4	YDR257C	TRM82	Q03774	444 aa		4.25	□□□□□ -1.73
RKM4	YDR257C	COS9	P36034	407 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	SOL2	P37262	315 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	YCH1	P42937	148 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	TAF6	P53040	516 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	LSG1	P53145	640 aa	Known RBP	4.24	□□□□□ -1.73
RKM4	YDR257C	ENT5	Q03769	411 aa	Known RBP	4.24	□□□□□ -1.73
RKM4	YDR257C	RVB1	Q03940	463 aa	Known RBP	4.24	□□□□□ -1.73
RKM4	YDR257C	ALE1	Q08548	619 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	CMK2	P22517	447 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	RBK1	P25332	333 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	IES6	P32617	166 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	BMT2	P38278	337 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	MMS21	P38632	267 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	HEM14	P40012	539 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	IGD1	P43598	195 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	AIM23	P47015	356 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	TIS11	P47977	285 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	HAL1	Q01766	294 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	CAB5	Q03941	241 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	SLM3	Q12093	417 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	FRE8	Q12209	686 aa		4.24	□□□□□ -1.73
RKM4	YDR257C	RPL18A	P0CX49	186 aa	Known RBP	4.23	□□□□□ -1.73
RKM4	YDR257C	RPL18B	P0CX50	186 aa	Known RBP	4.23	□□□□□ -1.73
RKM4	YDR257C	UNG1	P12887	359 aa		4.23	□□□□□ -1.73
RKM4	YDR257C	YPS1	P32329	569 aa		4.23	□□□□□ -1.73
RKM4	YDR257C	GPI18	P38211	433 aa		4.23	□□□□□ -1.73
RKM4	YDR257C	SWC5	P38326	303 aa		4.23	□□□□□ -1.73
RKM4	YDR257C	MOB2	P43563	287 aa		4.23	□□□□□ -1.73
RKM4	YDR257C	YFR018C	P43599	363 aa		4.23	□□□□□ -1.73
RKM4	YDR257C	SLT2	Q00772	484 aa		4.23	□□□□□ -1.73
RKM4	YDR257C	YLR177W	Q06251	628 aa		4.23	□□□□□ -1.73
RKM4	YDR257C	COX4	P04037	155 aa		4.22	□□□□□ -1.73
RKM4	YDR257C	PCL1	P24867	279 aa		4.22	□□□□□ -1.73
RKM4	YDR257C	PMT2	P31382	759 aa		4.22	□□□□□ -1.73
RKM4	YDR257C	ACB1	P31787	87 aa		4.22	□□□□□ -1.73
RKM4	YDR257C	RCK2	P38623	610 aa		4.22	□□□□□ -1.73
RKM4	YDR257C	WSC4	P38739	605 aa		4.22	□□□□□ -1.73
RKM4	YDR257C	MNN9	P39107	395 aa	Known RBP	4.22	□□□□□ -1.73
RKM4	YDR257C	YGR168C	P53293	376 aa		4.22	□□□□□ -1.73
RKM4	YDR257C	PXR1	P53335	271 aa	Predicted RBP	4.22	□□□□□ -1.73
RKM4	YDR257C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
RKM4	YDR257C	TOA1	P32773	286 aa		4.21	□□□□□ -1.74
RKM4	YDR257C	RPS0A	P32905	252 aa	Known RBP	4.21	□□□□□ -1.74
RKM4	YDR257C	RRF1	P38771	230 aa		4.21	□□□□□ -1.74
RKM4	YDR257C	UTP25	P40498	721 aa	Known RBP	4.21	□□□□□ -1.74
RKM4	YDR257C	VHT1	P53241	593 aa		4.21	□□□□□ -1.74
RKM4	YDR257C	ARP5	P53946	755 aa		4.21	□□□□□ -1.74
RKM4	YDR257C	SUR7	P54003	302 aa		4.21	□□□□□ -1.74
RKM4	YDR257C	DDC1	Q08949	612 aa		4.21	□□□□□ -1.74
RKM4	YDR257C	ITR2	P30606	609 aa		4.2	□□□□□ -1.74
RKM4	YDR257C	YBR241C	P38142	488 aa		4.2	□□□□□ -1.74
RKM4	YDR257C	HCH1	P53834	153 aa		4.2	□□□□□ -1.74
RKM4	YDR257C	TSA2	Q04120	196 aa		4.2	□□□□□ -1.74
RKM4	YDR257C	FOL3	Q12676	427 aa	Predicted RBP	4.2	□□□□□ -1.74
RKM4	YDR257C	RPS14A	P06367	137 aa	Known RBP	4.19	□□□□□ -1.74
RKM4	YDR257C	RPS14B	P39516	138 aa	Known RBP	4.19	□□□□□ -1.74
RKM4	YDR257C	ALD5	P40047	520 aa	Known RBP	4.19	□□□□□ -1.74
RKM4	YDR257C	SEH1	P53011	349 aa	Known RBP	4.19	□□□□□ -1.74
RKM4	YDR257C	YGR015C	P53208	328 aa		4.19	□□□□□ -1.74
RKM4	YDR257C	CUR1	Q06469	252 aa		4.19	□□□□□ -1.74
RKM4	YDR257C	SLF1	Q12034	447 aa	Known RBP	4.19	□□□□□ -1.74
RKM4	YDR257C	LDB17	Q12342	491 aa		4.19	□□□□□ -1.74
RKM4	YDR257C	RPN6	Q12377	434 aa		4.19	□□□□□ -1.74
RKM4	YDR257C	MSS116	P15424	664 aa	Known RBP	4.18	□□□□□ -1.74
RKM4	YDR257C	BUD2	P33314	1104 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	UTH1	P36135	365 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	PCL7	P40186	285 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	BIO3	P50277	480 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	CDH1	P53197	566 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	VOA1	P53262	265 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	RNH201	P53942	307 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	KTR6	P54070	446 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	MRPS16	Q02608	121 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	ADD37	Q03233	198 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	DAL80	P26343	269 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	URA10	P30402	227 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	PEX22	P39718	180 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	INA22	P40576	216 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	YJR054W	P47114	497 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	RIB4	P50861	169 aa	Predicted RBP	4.18	□□□□□ -1.74
RKM4	YDR257C	YPS5	P53057	165 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	DBP6	P53734	629 aa	Known RBP	4.18	□□□□□ -1.74
RKM4	YDR257C	YDR115W	Q04598	105 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	YPR1	Q12458	312 aa		4.18	□□□□□ -1.74
RKM4	YDR257C	RPL21B	Q12672	160 aa	Known RBP	4.18	□□□□□ -1.74
RKM4	YDR257C	PSK1	P31374	1356 aa		4.17	□□□□□ -1.74
RKM4	YDR257C	SAR1	P20606	190 aa	Known RBP	4.17	□□□□□ -1.74
RKM4	YDR257C	MEI5	P32489	222 aa		4.17	□□□□□ -1.74
RKM4	YDR257C	PRS1	P32895	427 aa	Known RBP	4.17	□□□□□ -1.74
RKM4	YDR257C	SHE1	P38200	338 aa		4.17	□□□□□ -1.74
RKM4	YDR257C	LOC1	P43586	204 aa	Predicted RBP	4.17	□□□□□ -1.74
RKM4	YDR257C	LOH1	P47055	219 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms