RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C RPS19BP07281 144 aaPredicted RBP3.3□□□□□ -1.88
RRI1YDL216C SWI3P32591 825 aa3.3□□□□□ -1.88
RRI1YDL216C YNL320WP42840 284 aa3.3□□□□□ -1.88
RRI1YDL216C MOB2P43563 287 aa3.3□□□□□ -1.88
RRI1YDL216C YHC3P47040 408 aa3.3□□□□□ -1.88
RRI1YDL216C EFM3P47163 339 aa3.3□□□□□ -1.88
RRI1YDL216C RMI1Q02685 241 aa3.3□□□□□ -1.88
RRI1YDL216C SLM3Q12093 417 aa3.3□□□□□ -1.88
RRI1YDL216C FRE8Q12209 686 aa3.3□□□□□ -1.88
RRI1YDL216C NFI1Q12216 726 aa3.3□□□□□ -1.88
RRI1YDL216C POT1P27796 417 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
RRI1YDL216C SPS19P32573 292 aaKnown RBP3.29□□□□□ -1.88
RRI1YDL216C MRPS5P33759 307 aa3.29□□□□□ -1.88
RRI1YDL216C PTK1P36002 662 aaPredicted RBP3.29□□□□□ -1.88
RRI1YDL216C DTR1P38125 572 aa3.29□□□□□ -1.88
RRI1YDL216C IST2P38250 946 aa3.29□□□□□ -1.88
RRI1YDL216C ATG7P38862 630 aa3.29□□□□□ -1.88
RRI1YDL216C YMR134WP40207 237 aa3.29□□□□□ -1.88
RRI1YDL216C STB1P42845 420 aa3.29□□□□□ -1.88
RRI1YDL216C PRM1P53835 661 aa3.29□□□□□ -1.88
RRI1YDL216C AQR1P53943 586 aa3.29□□□□□ -1.88
RRI1YDL216C MRX11Q03079 207 aa3.29□□□□□ -1.88
RRI1YDL216C RRB1Q04225 511 aaKnown RBP3.29□□□□□ -1.88
RRI1YDL216C YOR012WQ12351 137 aa3.29□□□□□ -1.88
RRI1YDL216C SMP1P38128 452 aa3.28□□□□□ -1.88
RRI1YDL216C RCK2P38623 610 aa3.28□□□□□ -1.88
RRI1YDL216C ATP22P50273 684 aaPredicted RBP3.28□□□□□ -1.88
RRI1YDL216C YGR067CP53243 804 aa3.28□□□□□ -1.88
RRI1YDL216C SUR7P54003 302 aa3.28□□□□□ -1.88
RRI1YDL216C NAT4Q04751 285 aa3.28□□□□□ -1.88
RRI1YDL216C ALE1Q08548 619 aa3.28□□□□□ -1.88
RRI1YDL216C STE3P06783 470 aa3.27□□□□□ -1.89
RRI1YDL216C SAG1P20840 650 aa3.27□□□□□ -1.89
RRI1YDL216C MXR2P25566 168 aa3.27□□□□□ -1.89
RRI1YDL216C VPH1P32563 840 aaKnown RBP3.27□□□□□ -1.89
RRI1YDL216C SIF2P38262 535 aa3.27□□□□□ -1.89
RRI1YDL216C CUE3P53137 624 aaKnown RBP3.27□□□□□ -1.89
RRI1YDL216C CSM3Q04659 317 aa3.27□□□□□ -1.89
RRI1YDL216C ARR1Q06596 294 aa3.27□□□□□ -1.89
RRI1YDL216C TIR4Q12218 487 aaPredicted RBP3.27□□□□□ -1.89
RRI1YDL216C STE2D6VTK4 431 aa3.26□□□□□ -1.89
RRI1YDL216C TAL1P15019 335 aaKnown RBP3.26□□□□□ -1.89
RRI1YDL216C HXT2P23585 541 aa3.26□□□□□ -1.89
RRI1YDL216C URA10P30402 227 aa3.26□□□□□ -1.89
RRI1YDL216C MKK1P32490 508 aa3.26□□□□□ -1.89
RRI1YDL216C PCH2P38126 564 aa3.26□□□□□ -1.89
RRI1YDL216C RRT13P40042 185 aa3.26□□□□□ -1.89
RRI1YDL216C COQ5P49017 307 aa3.26□□□□□ -1.89
RRI1YDL216C LSG1P53145 640 aaKnown RBP3.26□□□□□ -1.89
RRI1YDL216C SED5Q01590 340 aa3.26□□□□□ -1.89
RRI1YDL216C DDC1Q08949 612 aa3.26□□□□□ -1.89
RRI1YDL216C RGS2Q99188 309 aa3.26□□□□□ -1.89
RRI1YDL216C INO80P53115 1489 aa3.26□□□□□ -1.89
RRI1YDL216C SPT7P35177 1332 aa3.26□□□□□ -1.89
RRI1YDL216C RPS14AP06367 137 aaKnown RBP3.25□□□□□ -1.89
RRI1YDL216C ERG9P29704 444 aa3.25□□□□□ -1.89
RRI1YDL216C ZIP1P31111 875 aa3.25□□□□□ -1.89
RRI1YDL216C YEL043WP32618 956 aa3.25□□□□□ -1.89
RRI1YDL216C YKL071WP36086 256 aa3.25□□□□□ -1.89
RRI1YDL216C PEX32P38292 413 aa3.25□□□□□ -1.89
RRI1YDL216C EFM1P38732 585 aa3.25□□□□□ -1.89
RRI1YDL216C GGC1P38988 300 aa3.25□□□□□ -1.89
RRI1YDL216C RPS14BP39516 138 aaKnown RBP3.25□□□□□ -1.89
RRI1YDL216C APJ1P53940 528 aa3.25□□□□□ -1.89
RRI1YDL216C YOL085CQ99345 113 aa3.25□□□□□ -1.89
RRI1YDL216C YLL053CP0CD98 152 aa3.24□□□□□ -1.89
RRI1YDL216C BGL2P15703 313 aaKnown RBP3.24□□□□□ -1.89
RRI1YDL216C UTR1P21373 530 aa3.24□□□□□ -1.89
RRI1YDL216C YIL089WP40500 205 aa3.24□□□□□ -1.89
RRI1YDL216C PDR16P53860 351 aaKnown RBP3.24□□□□□ -1.89
RRI1YDL216C API2Q04413 109 aa3.24□□□□□ -1.89
RRI1YDL216C RPN8Q08723 338 aaKnown RBP3.24□□□□□ -1.89
RRI1YDL216C MMT2Q08970 484 aa3.24□□□□□ -1.89
RRI1YDL216C RAD23P32628 398 aaKnown RBP3.23□□□□□ -1.89
RRI1YDL216C RAD1P06777 1100 aa3.22□□□□□ -1.89
RRI1YDL216C DCC1P25559 380 aa3.22□□□□□ -1.89
RRI1YDL216C TIP20P33891 701 aa3.22□□□□□ -1.89
RRI1YDL216C UIP5P36137 443 aa3.22□□□□□ -1.89
RRI1YDL216C SLX1P38324 304 aa3.22□□□□□ -1.89
RRI1YDL216C ALP1P38971 573 aa3.22□□□□□ -1.89
RRI1YDL216C FHL1P39521 936 aa3.22□□□□□ -1.89
RRI1YDL216C PRP39P39682 629 aaKnown RBP3.22□□□□□ -1.89
RRI1YDL216C YCH1P42937 148 aa3.22□□□□□ -1.89
RRI1YDL216C HST1P53685 503 aa3.22□□□□□ -1.89
RRI1YDL216C YNL146WP53906 100 aa3.22□□□□□ -1.89
RRI1YDL216C SCS7Q03529 384 aa3.22□□□□□ -1.89
RRI1YDL216C PML1Q07930 204 aaPredicted RBP3.22□□□□□ -1.89
RRI1YDL216C CIN8P27895 1000 aa3.21□□□□□ -1.89
RRI1YDL216C IML3P38265 245 aa3.21□□□□□ -1.89
RRI1YDL216C MMS21P38632 267 aa3.21□□□□□ -1.89
RRI1YDL216C YGL114WP53134 725 aa3.21□□□□□ -1.89
RRI1YDL216C PSY3Q12318 242 aa3.21□□□□□ -1.89
RRI1YDL216C YAL067W-AQ8TGK6 75 aa3.21□□□□□ -1.89
RRI1YDL216C CKA2P19454 339 aa3.2□□□□□ -1.9
RRI1YDL216C TPS2P31688 896 aaKnown RBP3.2□□□□□ -1.9
RRI1YDL216C SMI1P32566 505 aa3.2□□□□□ -1.9
RRI1YDL216C MYO3P36006 1272 aa3.2□□□□□ -1.9
RRI1YDL216C FRT2P39734 528 aa3.2□□□□□ -1.9
RRI1YDL216C BTT1P40314 149 aaPredicted RBP3.2□□□□□ -1.9
RRI1YDL216C YFR018CP43599 363 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms