RNA–Protein interactions for RNA: YDL031W

DBP10, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP10, Length 2,988 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP10	YDL031W	URE2	P23202	354 aa	Known RBP	2.59	□□□□□ -2
DBP10	YDL031W	CAM1	P29547	415 aa	Known RBP	2.59	□□□□□ -2
DBP10	YDL031W	NUP2	P32499	720 aa		2.59	□□□□□ -2
DBP10	YDL031W	SEC17	P32602	292 aa		2.59	□□□□□ -2
DBP10	YDL031W	THI2	P38141	450 aa		2.59	□□□□□ -2
DBP10	YDL031W	AMN1	P38285	549 aa	Predicted RBP	2.59	□□□□□ -2
DBP10	YDL031W	UTP9	P38882	575 aa	Known RBP	2.59	□□□□□ -2
DBP10	YDL031W	YIL166C	P40445	542 aa		2.59	□□□□□ -2
DBP10	YDL031W	YIL165C	P40446	119 aa		2.59	□□□□□ -2
DBP10	YDL031W	RPL10	P41805	221 aa	Known RBP	2.59	□□□□□ -2
DBP10	YDL031W	FAR3	P46671	204 aa		2.59	□□□□□ -2
DBP10	YDL031W	YPL107W	Q02873	248 aa		2.59	□□□□□ -2
DBP10	YDL031W	RSC9	Q03124	581 aa		2.59	□□□□□ -2
DBP10	YDL031W	SSY1	Q03770	852 aa		2.59	□□□□□ -2
DBP10	YDL031W	SEI1	Q06058	285 aa		2.59	□□□□□ -2
DBP10	YDL031W	DIA2	Q08496	732 aa	Predicted RBP	2.59	□□□□□ -2
DBP10	YDL031W	SRL2	Q12020	392 aa		2.59	□□□□□ -2
DBP10	YDL031W	SCEI	P03882	235 aa		2.58	□□□□□ -2
DBP10	YDL031W	PBS2	P08018	668 aa		2.58	□□□□□ -2
DBP10	YDL031W	RPS23A	P0CX29	145 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	RPS23B	P0CX30	145 aa		2.58	□□□□□ -2
DBP10	YDL031W	YAK1	P14680	807 aa		2.58	□□□□□ -2
DBP10	YDL031W	MNS1	P32906	549 aa		2.58	□□□□□ -2
DBP10	YDL031W	ARC19	P33204	171 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	EXO84	P38261	753 aa		2.58	□□□□□ -2
DBP10	YDL031W	ATG7	P38862	630 aa		2.58	□□□□□ -2
DBP10	YDL031W	PTH1	P38876	190 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	MOT3	P54785	490 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	NOG1	Q02892	647 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	MCH4	Q08268	501 aa		2.58	□□□□□ -2
DBP10	YDL031W	ACM1	Q08981	209 aa		2.58	□□□□□ -2
DBP10	YDL031W	MAK32	P23060	363 aa		2.58	□□□□□ -2
DBP10	YDL031W	AGP1	P25376	633 aa		2.58	□□□□□ -2
DBP10	YDL031W	SNC1	P31109	117 aa		2.58	□□□□□ -2
DBP10	YDL031W	SIP2	P34164	415 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	TSC10	P38342	320 aa		2.58	□□□□□ -2
DBP10	YDL031W	PZF1	P39933	429 aa		2.58	□□□□□ -2
DBP10	YDL031W	HIS6	P40545	261 aa		2.58	□□□□□ -2
DBP10	YDL031W	TDA10	P42938	290 aa		2.58	□□□□□ -2
DBP10	YDL031W	TWF1	P53250	332 aa		2.58	□□□□□ -2
DBP10	YDL031W	SLI1	P53304	468 aa		2.58	□□□□□ -2
DBP10	YDL031W	MPA43	P53583	542 aa	Predicted RBP	2.58	□□□□□ -2
DBP10	YDL031W	RIF2	Q06208	395 aa		2.58	□□□□□ -2
DBP10	YDL031W	CRN1	Q06440	651 aa		2.58	□□□□□ -2
DBP10	YDL031W	RFU1	Q08003	200 aa		2.58	□□□□□ -2
DBP10	YDL031W	BRX1	Q08235	291 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	DFG16	Q99234	619 aa		2.58	□□□□□ -2
DBP10	YDL031W	YML003W	P0CF16	290 aa		2.58	□□□□□ -2
DBP10	YDL031W	APT2	P36973	181 aa		2.58	□□□□□ -2
DBP10	YDL031W	CBP4	P37267	147 aa		2.58	□□□□□ -2
DBP10	YDL031W	APE4	P38821	490 aa		2.58	□□□□□ -2
DBP10	YDL031W	YJL206C	P39529	758 aa		2.58	□□□□□ -2
DBP10	YDL031W	ISC1	P40015	477 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	REE1	P40893	198 aa		2.58	□□□□□ -2
DBP10	YDL031W	MPC1	P53157	130 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	COS1	P53822	381 aa		2.58	□□□□□ -2
DBP10	YDL031W	LGE1	Q02796	332 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	SCS7	Q03529	384 aa		2.58	□□□□□ -2
DBP10	YDL031W	GTB1	Q04924	702 aa		2.58	□□□□□ -2
DBP10	YDL031W	PNP1	Q05788	311 aa		2.58	□□□□□ -2
DBP10	YDL031W	MUM3	Q08750	479 aa		2.58	□□□□□ -2
DBP10	YDL031W	YPR202W	Q08993	238 aa		2.58	□□□□□ -2
DBP10	YDL031W	RPN5	Q12250	445 aa	Known RBP	2.58	□□□□□ -2
DBP10	YDL031W	PSF1	Q12488	208 aa		2.58	□□□□□ -2
DBP10	YDL031W	YPT6	Q99260	215 aa		2.58	□□□□□ -2
DBP10	YDL031W	YLR358C	O13565	187 aa		2.57	□□□□□ -2
DBP10	YDL031W	GPI12	P23797	304 aa		2.57	□□□□□ -2
DBP10	YDL031W	SSE2	P32590	693 aa	Known RBP	2.57	□□□□□ -2
DBP10	YDL031W	GPI18	P38211	433 aa		2.57	□□□□□ -2
DBP10	YDL031W	FAT1	P38225	669 aa		2.57	□□□□□ -2
DBP10	YDL031W	ECM10	P39987	644 aa		2.57	□□□□□ -2
DBP10	YDL031W	SLZ1	P40167	298 aa		2.57	□□□□□ -2
DBP10	YDL031W	TY4A-J	P47023	414 aa		2.57	□□□□□ -2
DBP10	YDL031W	XPT1	P47165	209 aa		2.57	□□□□□ -2
DBP10	YDL031W	SLD3	P53135	668 aa		2.57	□□□□□ -2
DBP10	YDL031W	TPC1	P53257	314 aa		2.57	□□□□□ -2
DBP10	YDL031W	HSP31	Q04432	237 aa		2.57	□□□□□ -2
DBP10	YDL031W	RDL2	Q08742	149 aa	Known RBP	2.57	□□□□□ -2
DBP10	YDL031W	FRE3	Q08905	711 aa		2.57	□□□□□ -2
DBP10	YDL031W	IZH2	Q12442	317 aa		2.57	□□□□□ -2
DBP10	YDL031W	YGR161W-C	Q3E744	92 aa		2.57	□□□□□ -2
DBP10	YDL031W	MET3	P08536	511 aa		2.57	□□□□□ -2
DBP10	YDL031W	ARF1	P11076	181 aa	Known RBP	2.57	□□□□□ -2
DBP10	YDL031W	ZWF1	P11412	505 aa	Known RBP	2.57	□□□□□ -2
DBP10	YDL031W	SDH3	P33421	198 aa		2.57	□□□□□ -2
DBP10	YDL031W	CLG1	P35190	452 aa		2.57	□□□□□ -2
DBP10	YDL031W	SOR1	P35497	357 aa	Known RBP	2.57	□□□□□ -2
DBP10	YDL031W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
DBP10	YDL031W	ECM1	P39715	212 aa		2.57	□□□□□ -2
DBP10	YDL031W	NUP57	P48837	541 aa		2.57	□□□□□ -2
DBP10	YDL031W	PEF1	P53238	335 aa		2.57	□□□□□ -2
DBP10	YDL031W	COG5	P53951	403 aa		2.57	□□□□□ -2
DBP10	YDL031W	UGO1	Q03327	502 aa		2.57	□□□□□ -2
DBP10	YDL031W	TAF12	Q03761	539 aa		2.57	□□□□□ -2
DBP10	YDL031W	TMA10	Q06177	86 aa		2.57	□□□□□ -2
DBP10	YDL031W	RAF1	Q06891	181 aa		2.57	□□□□□ -2
DBP10	YDL031W	SOR2	Q07786	357 aa		2.57	□□□□□ -2
DBP10	YDL031W	CHS5	Q12114	671 aa	Known RBP	2.57	□□□□□ -2
DBP10	YDL031W	YOR343C	Q12484	108 aa		2.57	□□□□□ -2
DBP10	YDL031W	MSS18	P08593	268 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms