RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 STAMQ92783 540 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 SDF4Q9BRK5 362 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 MRPL9Q9BYD2 267 aaKnown RBP8.97□□□□□ -0.97
PHGDH-217ENST00000641455 FOXQ1Q9C009 403 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 RIOX1Q9H6W3 641 aa8.97□□□□□ -0.97
PHGDH-217ENST00000641455 SMG5Q9UPR3 1016 aaKnown RBP8.97□□□□□ -0.97
PHGDH-217ENST00000641455 ATRXP46100 2492 aa8.96□□□□□ -0.97
PHGDH-217ENST00000641455 MIA3Q5JRA6 1907 aa8.96□□□□□ -0.97
PHGDH-217ENST00000641455 BACH1O14867 736 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 CYTH3O43739 400 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 LRRN2O75325 713 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 VTNP04004 478 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 SSBP05455 408 aaKnown RBP eCLIP8.96□□□□□ -0.98
PHGDH-217ENST00000641455 CTSAP10619 480 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 CRYBB1P53674 252 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-217ENST00000641455 ACTR2P61160 394 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 CSTF1Q05048 431 aaKnown RBP8.96□□□□□ -0.98
PHGDH-217ENST00000641455 COL9A3Q14050 684 aaPredicted RBP8.96□□□□□ -0.98
PHGDH-217ENST00000641455 DSC3Q14574 896 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 PTPN14Q15678 1187 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 IMMTQ16891 758 aaKnown RBP8.96□□□□□ -0.98
PHGDH-217ENST00000641455 PHLDB3Q6NSJ2 640 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 KIAA0319LQ8IZA0 1049 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 SLC44A3Q8N4M1 653 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 METTL13Q8N6R0 699 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 PJA1Q8NG27 643 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 RILPL2Q969X0 211 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 EMILIN2Q9BXX0 1053 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 CNNM2Q9H8M5 875 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 DLGAP2Q9P1A6 1054 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 GMEB2Q9UKD1 530 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 CHD8Q9HCK8 2581 aa8.96□□□□□ -0.98
PHGDH-217ENST00000641455 SPDYE3A6NKU9 549 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 DDX39AO00148 427 aaKnown RBP8.95□□□□□ -0.98
PHGDH-217ENST00000641455 HBP1O60381 514 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 N4BP1O75113 896 aaKnown RBP8.95□□□□□ -0.98
PHGDH-217ENST00000641455 MYBP10242 640 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 POLGP54098 1239 aaPredicted RBP8.95□□□□□ -0.98
PHGDH-217ENST00000641455 SEC23AQ15436 765 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 C15orf39Q6ZRI6 1047 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 PLPPR4Q7Z2D5 763 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 TRMT1LQ7Z2T5 733 aaKnown RBP8.95□□□□□ -0.98
PHGDH-217ENST00000641455 DDX53Q86TM3 631 aaKnown RBP8.95□□□□□ -0.98
PHGDH-217ENST00000641455 TMEM173Q86WV6 379 aaPredicted RBP8.95□□□□□ -0.98
PHGDH-217ENST00000641455 ST13P5Q8NFI4 369 aaPredicted RBP8.95□□□□□ -0.98
PHGDH-217ENST00000641455 RRP36Q96EU6 259 aaKnown RBP8.95□□□□□ -0.98
PHGDH-217ENST00000641455 SHDQ96IW2 340 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 SCLT1Q96NL6 688 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 BCO2Q9BYV7 579 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 JADE2Q9NQC1 790 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 SEC63Q9UGP8 760 aaKnown RBP8.95□□□□□ -0.98
PHGDH-217ENST00000641455 PCDHGA2Q9Y5H1 932 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 UBIAD1Q9Y5Z9 338 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 CLUHO75153 1309 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 USP24Q9UPU5 2620 aa8.95□□□□□ -0.98
PHGDH-217ENST00000641455 CHD6Q8TD26 2715 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 CCDC195A0A1B0GUA6 201 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 ERICH2A1L162 156 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 PIK3CDO00329 1044 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 MEIS2O14770 477 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 GLULP15104 373 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 SLC26A2P50443 739 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 CLCN4P51793 760 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 RNASELQ05823 741 aaKnown RBP8.94□□□□□ -0.98
PHGDH-217ENST00000641455 UBXN2BQ14CS0 331 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 ACAP1Q15027 740 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 UBE2SQ16763 222 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 ZNF528Q3MIS6 628 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 ZNF484Q5JVG2 852 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 ANKRD45Q5TZF3 282 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 FAM160B1Q5W0V3 765 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 PDXDC2PQ6P474 469 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 ELMSAN1Q6PJG2 1045 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 CYB5R4Q7L1T6 521 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 GET4Q7L5D6 327 aaPredicted RBP8.94□□□□□ -0.98
PHGDH-217ENST00000641455 CKAP2LQ8IYA6 745 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 MAML2Q8IZL2 1156 aaPredicted RBP8.94□□□□□ -0.98
PHGDH-217ENST00000641455 NXPE3Q969Y0 559 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 IGSF21Q96ID5 467 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 ZNF668Q96K58 619 aaPredicted RBP8.94□□□□□ -0.98
PHGDH-217ENST00000641455 KLHL5Q96PQ7 755 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 MYADMQ96S97 322 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 MAP7D2Q96T17 732 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 PIDD1Q9HB75 910 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 WDR6Q9NNW5 1121 aaKnown RBP8.94□□□□□ -0.98
PHGDH-217ENST00000641455 MAN1C1Q9NR34 630 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 SH2B1Q9NRF2 756 aaPredicted RBP8.94□□□□□ -0.98
PHGDH-217ENST00000641455 EPS15L1Q9UBC2 864 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 FBXO4Q9UKT5 387 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 RAB23Q9ULC3 237 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 AKT3Q9Y243 479 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 INPP5FQ9Y2H2 1132 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 IRAK3Q9Y616 596 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 SALL3Q9BXA9 1300 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 COL1A2P08123 1366 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 FAM208BQ5VWN6 2430 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 CFAP47Q6ZTR5 3102 aa8.94□□□□□ -0.98
PHGDH-217ENST00000641455 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-217ENST00000641455 CARNS1A5YM72 827 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms