RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ALG3Q92685 438 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 BTBD6Q96KE9 485 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 MAD2L2Q9UI95 211 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 KIAA1024Q9UPX6 916 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 G3V3G9 751 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 HIP1RO75146 1068 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 H2AFZP0C0S5 128 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 RANBP1P43487 201 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 RPL21P46778 160 aaKnown RBP14.86□□□□□ -0.03
SCARB2-227ENST00000640957 UBE4AQ14139 1066 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 PPP2R5BQ15173 497 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 DCAF8Q5TAQ9 597 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 TMEM154Q6P9G4 183 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 H2AFVQ71UI9 128 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 IRF2BP2Q7Z5L9 587 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 SLC35G2Q8TBE7 412 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 KRT35Q92764 455 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 ARHGEF2Q92974 986 aaKnown RBP14.86□□□□□ -0.03
SCARB2-227ENST00000640957 ARHGEF26Q96DR7 871 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 AMFRQ9UKV5 643 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 PKD1L3Q7Z443 1732 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 AFF2P51816 1311 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 PCNTO95613 3336 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 SPAG7O75391 227 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 MMP13P45452 471 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 MTM1Q13496 603 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 CNGA2Q16280 664 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 EXOC3L4Q17RC7 722 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 JAMLQ86YT9 394 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 GUF1Q8N442 669 aaKnown RBP14.86□□□□□ -0.03
SCARB2-227ENST00000640957 DTX3LQ8TDB6 740 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 TEKT4Q8WW24 435 aa14.86□□□□□ -0.03
SCARB2-227ENST00000640957 PABPC3Q9H361 631 aaKnown RBP14.86□□□□□ -0.03
SCARB2-227ENST00000640957 CNOT10Q9H9A5 744 aaKnown RBP14.86□□□□□ -0.03
SCARB2-227ENST00000640957 BCL9O00512 1426 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 CBX6O95503 412 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 GM2AP17900 193 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 MGAT5Q09328 741 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 NFIXQ14938 502 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 ANO7Q6IWH7 933 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 ISLR2Q6UXK2 745 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 TPTE2Q6XPS3 522 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 NT5DC3Q86UY8 548 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 SRRM1Q8IYB3 904 aaKnown RBP14.85□□□□□ -0.03
SCARB2-227ENST00000640957 CNBD1Q8NA66 436 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 ACTRT1Q8TDG2 376 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 PBKQ96KB5 322 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 PICK1Q9NRD5 415 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 HDAC9Q9UKV0 1011 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 CCDC169A6NNP5 214 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 DDX3XO00571 662 aaKnown RBP eCLIP14.85□□□□□ -0.033e-14■■■■■ 29.4
SCARB2-227ENST00000640957 PAEPP09466 180 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 PPP1R15BQ5SWA1 713 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 PHC3Q8NDX5 983 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 NSUN4Q96CB9 384 aaKnown RBP14.85□□□□□ -0.03
SCARB2-227ENST00000640957 ERP44Q9BS26 406 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 C2CD2Q9Y426 696 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 KCPQ6ZWJ8 1503 aa14.85□□□□□ -0.03
SCARB2-227ENST00000640957 CCND1P24385 295 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 BLMHQ13867 455 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 FAM182AQ5T1J6 154 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 KRT79Q5XKE5 535 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 CCDC105Q8IYK2 499 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 ERP27Q96DN0 273 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 NID2Q14112 1375 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 RPTORQ8N122 1335 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 POTEB3A0JP26 581 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 POTECB2RU33 542 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 SUN1O94901 812 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 EPHB2P29323 1055 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 PAPOLAP51003 745 aaKnown RBP14.84□□□□□ -0.03
SCARB2-227ENST00000640957 RAB27AP51159 221 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 AUHQ13825 339 aaKnown RBP14.84□□□□□ -0.03
SCARB2-227ENST00000640957 KIAA1755Q5JYT7 1200 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 POTEBQ6S5H4 581 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 ARMC9Q7Z3E5 817 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 UTP4Q969X6 686 aaKnown RBP14.84□□□□□ -0.03
SCARB2-227ENST00000640957 NUDCD1Q96RS6 583 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 SLCO1B3Q9NPD5 702 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 ACP6Q9NPH0 428 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 USP40Q9NVE5 1235 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 LAMB4A4D0S4 1761 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 RBAK-RBAKDNI3L0D1 243 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 PDE6CP51160 858 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 PLS1Q14651 629 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 TGS1Q96RS0 853 aaKnown RBP14.84□□□□□ -0.03
SCARB2-227ENST00000640957 KCNMB3Q9NPA1 279 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 GPCPD1Q9NPB8 672 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 BATF3Q9NR55 127 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 FAM114A2Q9NRY5 505 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 BARHL2Q9NY43 387 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 ZNF804BA4D1E1 1349 aa14.84□□□□□ -0.03
SCARB2-227ENST00000640957 hCG_2014768A0A024R1R8 64 aa14.83□□□□□ -0.03
SCARB2-227ENST00000640957 KIF3CO14782 793 aa14.83□□□□□ -0.03
SCARB2-227ENST00000640957 ASAP2O43150 1006 aa14.83□□□□□ -0.03
SCARB2-227ENST00000640957 SLURP2P0DP57 97 aa14.83□□□□□ -0.03
SCARB2-227ENST00000640957 PECAM1P16284 738 aaPredicted RBP14.83□□□□□ -0.03
SCARB2-227ENST00000640957 ZDHHC24Q6UX98 284 aa14.83□□□□□ -0.03
SCARB2-227ENST00000640957 SPATA21Q7Z572 469 aa14.83□□□□□ -0.03
SCARB2-227ENST00000640957 THAP2Q9H0W7 228 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms