RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, human

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-223	ENST00000640640	NCK2	O43639	380 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	HMGCS2	P54868	508 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	MKRN3	Q13064	507 aa	Known RBP	18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	KRT39	Q6A163	491 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	RBM43	Q6ZSC3	357 aa	Known RBP	18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	SAAL1	Q96ER3	474 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	VCPKMT	Q9H867	229 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	IFT122	Q9HBG6	1241 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	CAPN7	Q9Y6W3	813 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	ZNF667	Q5HYK9	610 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	POLL	Q9UGP5	575 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	SCIN	Q9Y6U3	715 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	PPM1F	P49593	454 aa	Predicted RBP	18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	MYO1E	Q12965	1108 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	ERICH1	Q86X53	443 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	SMC1B	Q8NDV3	1235 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	PSPC1	Q8WXF1	523 aa	Known RBP	18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	RILP	Q96NA2	401 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	SH2D3A	Q9BRG2	576 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	REEP2	Q9BRK0	252 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	INTS2	Q9H0H0	1204 aa	Known RBP	18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	ZNF70	Q9UC06	446 aa	Predicted RBP	18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	TRIP13	Q15645	432 aa	Predicted RBP	18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	OR6B2	Q6IFH4	312 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	FUCA2	Q9BTY2	467 aa		18.91	■□□□□ 0.62
SCARB2-223	ENST00000640640	EMSY	Q7Z589	1322 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	SYNGAP1	Q96PV0	1343 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	ATP1A1	P05023	1023 aa	Known RBP	18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	SLCO1A2	P46721	670 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	RAD9B	Q6WBX8	426 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	RASGRP2	Q7LDG7	609 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	RPUSD2	Q8IZ73	545 aa	Known RBP	18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	LPAR1	Q92633	364 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	ZNF302	Q9NR11	478 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	SEPT10	Q9P0V9	454 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	BAIAP2L1	Q9UHR4	511 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	MCF2L	O15068	1137 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	ZNF746	Q6NUN9	644 aa	Predicted RBP	18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	KSR1	Q8IVT5	923 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	SNX25	Q9H3E2	840 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	ODF2L	Q9ULJ1	636 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	DAGLB	Q8NCG7	672 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	RSRC1	Q96IZ7	334 aa	Known RBP	18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	FER1L4	A9Z1Z3	1794 aa		18.9	■□□□□ 0.62
SCARB2-223	ENST00000640640	WDR46	O15213	610 aa	Known RBP	18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	TADA3	O75528	432 aa		18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	RASSF2	P50749	326 aa		18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	FXR2	P51116	673 aa	Known RBP eCLIP	18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	MTMR2	Q13614	643 aa		18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	TMEM270	Q6UE05	265 aa		18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	RSPH3	Q86UC2	560 aa		18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	ARHGAP24	Q8N264	748 aa		18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	MTR	Q99707	1265 aa		18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	DIS3	Q9Y2L1	958 aa	Known RBP	18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	CD2AP	Q9Y5K6	639 aa		18.89	■□□□□ 0.62
SCARB2-223	ENST00000640640	PPP1R3G	B7ZBB8	358 aa		18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	CTNND1	O60716	968 aa	Known RBP	18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	GYPC	P04921	128 aa		18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	LIG3	P49916	1009 aa		18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	TMEM35B	Q8NCS4	154 aa		18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	FAM49A	Q9H0Q0	323 aa	Predicted RBP	18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	HEXIM2	Q96MH2	286 aa	Known RBP	18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	NOVA2	Q9UNW9	492 aa	Known RBP	18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	AK9	Q5TCS8	1911 aa		18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	FTL	P02792	175 aa	Predicted RBP	18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	INHBA	P08476	426 aa		18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	PACSIN2	Q9UNF0	486 aa	Predicted RBP	18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	SNX24	Q9Y343	169 aa		18.89	■□□□□ 0.61
SCARB2-223	ENST00000640640	TNS2	Q63HR2	1409 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	GIPC1	O14908	333 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	NR1D1	P20393	614 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	ADCY1	Q08828	1119 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	C3orf67	Q6ZVT6	689 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	HDLBP	Q00341	1268 aa	Known RBP	18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	NFIA	Q12857	509 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	NBPF3	Q9H094	633 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	PODXL	O00592	558 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	RASGRF2	O14827	1237 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	ABL1	P00519	1130 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	RFX1	P22670	979 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	RPA1	P27694	616 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	YWHAB	P31946	246 aa	Known RBP	18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	EIF3B	P55884	814 aa	Known RBP	18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	BASP1	P80723	227 aa	Known RBP	18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	EDRF1	Q3B7T1	1238 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	CCT6B	Q92526	530 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	ADAM21	Q9UKJ8	722 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	CRCP	O75575	148 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	COG2	Q14746	738 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	KIF22	Q14807	665 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	KCTD6	Q8NC69	237 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	LRRC8C	Q8TDW0	803 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	FAM193B	Q96PV7	902 aa	Predicted RBP	18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	C11orf70	Q9BRQ4	267 aa		18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	DDX47	Q9H0S4	455 aa	Known RBP	18.88	■□□□□ 0.61
SCARB2-223	ENST00000640640	SSU72P8	A0A1W2PR75	194 aa		18.87	■□□□□ 0.61
SCARB2-223	ENST00000640640	DMTN	Q08495	405 aa		18.87	■□□□□ 0.61

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