RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 HERC6Q8IVU3 1022 aa17.64■□□□□ 0.41
SPIN3-233ENST00000640039 FOXD4L4Q8WXT5 416 aaPredicted RBP17.64■□□□□ 0.41
SPIN3-233ENST00000640039 ZNF668Q96K58 619 aaPredicted RBP17.64■□□□□ 0.41
SPIN3-233ENST00000640039 AK8Q96MA6 479 aa17.64■□□□□ 0.41
SPIN3-233ENST00000640039 NLRP4Q96MN2 994 aa17.64■□□□□ 0.41
SPIN3-233ENST00000640039 ZBED2Q9BTP6 218 aa17.64■□□□□ 0.41
SPIN3-233ENST00000640039 PBX4Q9BYU1 374 aa17.64■□□□□ 0.41
SPIN3-233ENST00000640039 KIAA1024Q9UPX6 916 aa17.64■□□□□ 0.41
SPIN3-233ENST00000640039 CLIC4Q9Y696 253 aa17.64■□□□□ 0.41
SPIN3-233ENST00000640039 UNC80Q8N2C7 3258 aa17.64■□□□□ 0.41
SPIN3-233ENST00000640039 A0A087WWV3 80 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 PP2D1A8MPX8 630 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 USO1O60763 962 aaKnown RBP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 RABGGTBP53611 331 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 CEBPZQ03701 1054 aaKnown RBP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 ZRSR1Q15695 479 aaKnown RBP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 FAM43BQ6ZT52 329 aaPredicted RBP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 ZNF410Q86VK4 478 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 TMEM40Q8WWA1 233 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 TMEM143Q96AN5 459 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 TIFAQ96CG3 184 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 CDK5RAP3Q96JB5 506 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 ZNF396Q96N95 335 aaPredicted RBP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 GCOM2Q9BZD3 368 aaPredicted RBP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 ADAMTS10Q9H324 1103 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 NOC2LQ9Y3T9 749 aaKnown RBP17.63■□□□□ 0.41
SPIN3-233ENST00000640039 PCDHA11Q9Y5I1 949 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 COL4A3BPQ9Y5P4 624 aa17.63■□□□□ 0.41
SPIN3-233ENST00000640039 TLL1O43897 1013 aa17.62■□□□□ 0.41
SPIN3-233ENST00000640039 DARSP14868 501 aaKnown RBP17.62■□□□□ 0.41
SPIN3-233ENST00000640039 EIF4BP23588 611 aaKnown RBP17.62■□□□□ 0.41
SPIN3-233ENST00000640039 CDC25AP30304 524 aa17.62■□□□□ 0.41
SPIN3-233ENST00000640039 PBX2P40425 430 aa17.62■□□□□ 0.41
SPIN3-233ENST00000640039 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.62■□□□□ 0.41
SPIN3-233ENST00000640039 MCPH1Q8NEM0 835 aa17.62■□□□□ 0.41
SPIN3-233ENST00000640039 INO80BQ9C086 356 aaPredicted RBP17.62■□□□□ 0.41
SPIN3-233ENST00000640039 NT5C3AQ9H0P0 336 aa17.62■□□□□ 0.41
SPIN3-233ENST00000640039 ERVK-5Q9HDB9 667 aa17.62■□□□□ 0.41
SPIN3-233ENST00000640039 ST3GAL5Q9UNP4 418 aa17.62■□□□□ 0.41
SPIN3-233ENST00000640039 DNM3Q9UQ16 869 aa17.62■□□□□ 0.41
SPIN3-233ENST00000640039 GBF1Q92538 1859 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 TMEM265A0A087WTH1 108 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 A0A087WZ62 844 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 DENND3A2RUS2 1198 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 RBAK-RBAKDNI3L0D1 243 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 ASAP2O43150 1006 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 F13A1P00488 732 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 LONP1P36776 959 aaKnown RBP17.61■□□□□ 0.41
SPIN3-233ENST00000640039 UBA7P41226 1012 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 LAMTOR4Q0VGL1 99 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 MXD4Q14582 209 aaPredicted RBP17.61■□□□□ 0.41
SPIN3-233ENST00000640039 ECM1Q16610 540 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 FAM117BQ6P1L5 589 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 FAM228AQ86W67 206 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 RASSF8Q8NHQ8 419 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 PRPF31Q8WWY3 499 aaKnown RBP17.61■□□□□ 0.41
SPIN3-233ENST00000640039 USP28Q96RU2 1077 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 FDXACB1Q9BRP7 624 aaPredicted RBP17.61■□□□□ 0.41
SPIN3-233ENST00000640039 XPNPEP1Q9NQW7 623 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 CDH23Q9H251 3354 aa17.61■□□□□ 0.41
SPIN3-233ENST00000640039 MYH15Q9Y2K3 1946 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.6■□□□□ 0.41
SPIN3-233ENST00000640039 SLC26A4O43511 780 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 UPP2O95045 317 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 GJB5O95377 273 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 SRGAP2CP0DJJ0 459 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 SFPQP23246 707 aaKnown RBP eCLIP17.6■□□□□ 0.41
SPIN3-233ENST00000640039 MARCKSP29966 332 aaPredicted RBP17.6■□□□□ 0.41
SPIN3-233ENST00000640039 TFDP1Q14186 410 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 PTPAQ15257 358 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 PADI6Q6TGC4 694 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 TMCO2Q7Z6W1 182 aaPredicted RBP17.6■□□□□ 0.41
SPIN3-233ENST00000640039 CABP7Q86V35 215 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 KSR1Q8IVT5 923 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 MYLIPQ8WY64 445 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 CALML4Q96GE6 196 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 MMTAG2Q9BU76 263 aaKnown RBP17.6■□□□□ 0.41
SPIN3-233ENST00000640039 COL25A1Q9BXS0 654 aaPredicted RBP17.6■□□□□ 0.41
SPIN3-233ENST00000640039 POLR3FQ9H1D9 316 aaPredicted RBP17.6■□□□□ 0.41
SPIN3-233ENST00000640039 TSPYL2Q9H2G4 693 aaPredicted RBP17.6■□□□□ 0.41
SPIN3-233ENST00000640039 BHMT2Q9H2M3 363 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 NKX2-4Q9H2Z4 354 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 SLC28A3Q9HAS3 691 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 PTPRSQ13332 1948 aa17.6■□□□□ 0.41
SPIN3-233ENST00000640039 ENPP3O14638 875 aa17.59■□□□□ 0.41
SPIN3-233ENST00000640039 EYA4O95677 639 aa17.59■□□□□ 0.41
SPIN3-233ENST00000640039 ZSCAN20P17040 1043 aaPredicted RBP17.59■□□□□ 0.41
SPIN3-233ENST00000640039 STK38Q15208 465 aa17.59■□□□□ 0.41
SPIN3-233ENST00000640039 PPP2R2DQ66LE6 453 aa17.59■□□□□ 0.41
SPIN3-233ENST00000640039 MAEAQ7L5Y9 396 aa17.59■□□□□ 0.41
SPIN3-233ENST00000640039 KCTD17Q8N5Z5 321 aa17.59■□□□□ 0.41
SPIN3-233ENST00000640039 RNF149Q8NC42 400 aa17.59■□□□□ 0.41
SPIN3-233ENST00000640039 TOP1MTQ969P6 601 aa17.59■□□□□ 0.41
SPIN3-233ENST00000640039 RAD9AQ99638 391 aa17.59■□□□□ 0.41
SPIN3-233ENST00000640039 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
SPIN3-233ENST00000640039 YBX2Q9Y2T7 364 aaKnown RBP17.59■□□□□ 0.41
SPIN3-233ENST00000640039 E9PMD0 336 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms