RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 KCNH7Q9NS40 1196 aa8.07□□□□□ -1.12
RFC1-217ENST00000639695 CCM2LQ9NUG4 571 aaPredicted RBP8.07□□□□□ -1.12
RFC1-217ENST00000639695 A0A1W2PQ27 194 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 A0A1W2PQ64 194 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 A0A1W2PQC6 194 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 A0A1W2PQD8 194 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 TCRBV5S4A2TA0A5A2 114 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 NEK3P51956 506 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 PLP2Q04941 152 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 ADCY1Q08828 1119 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 TMEM62Q0P6H9 643 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 TMEM132BQ14DG7 1078 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 PDCD1Q15116 288 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 CHRNA2Q15822 529 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 C4orf46Q504U0 113 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 NLGN2Q8NFZ4 835 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 PIP4K2CQ8TBX8 421 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 TGFBRAP1Q8WUH2 860 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 DLG3Q92796 817 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 RNF38Q9H0F5 515 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 ZMAT4Q9H898 229 aa8.06□□□□□ -1.12
RFC1-217ENST00000639695 PTX3P26022 381 aaPredicted RBP8.05□□□□□ -1.12
RFC1-217ENST00000639695 GJA4P35212 333 aa8.05□□□□□ -1.12
RFC1-217ENST00000639695 MAPKAPK2P49137 400 aa8.05□□□□□ -1.12
RFC1-217ENST00000639695 C10orf62Q5T681 223 aaPredicted RBP8.05□□□□□ -1.12
RFC1-217ENST00000639695 RIOX2Q8IUF8 465 aa8.05□□□□□ -1.12
RFC1-217ENST00000639695 LZTR1Q8N653 840 aa8.05□□□□□ -1.12
RFC1-217ENST00000639695 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.05□□□□□ -1.12
RFC1-217ENST00000639695 JADE3Q92613 823 aa8.05□□□□□ -1.12
RFC1-217ENST00000639695 RUNDC1Q96C34 613 aa8.05□□□□□ -1.12
RFC1-217ENST00000639695 ORAI2Q96SN7 254 aa8.05□□□□□ -1.12
RFC1-217ENST00000639695 MSRAQ9UJ68 235 aa8.05□□□□□ -1.12
RFC1-217ENST00000639695 FOSP01100 380 aaPredicted RBP8.04□□□□□ -1.12
RFC1-217ENST00000639695 MTHFD2P13995 350 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 ATF2P15336 505 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 ENPP1P22413 925 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 KCNC1P48547 511 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 CORO7P57737 925 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 EPHA7Q15375 998 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 FSCN1Q16658 493 aaKnown RBP8.04□□□□□ -1.12
RFC1-217ENST00000639695 SPATS1Q496A3 300 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 ERICH6BQ5W0A0 696 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 CPZQ66K79 652 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 ZC3H14Q6PJT7 736 aaKnown RBP8.04□□□□□ -1.12
RFC1-217ENST00000639695 CATIPQ7Z7H3 387 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 UHMK1Q8TAS1 419 aaKnown RBP8.04□□□□□ -1.12
RFC1-217ENST00000639695 PLEKHO2Q8TD55 490 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 ELAC2Q9BQ52 826 aaKnown RBP8.04□□□□□ -1.12
RFC1-217ENST00000639695 TMPRSS5Q9H3S3 457 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 MS4A5Q9H3V2 200 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 FAM204AQ9H8W3 233 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 FAM50BQ9Y247 325 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 GPR45Q9Y5Y3 372 aa8.04□□□□□ -1.12
RFC1-217ENST00000639695 ZRANB2O95218 330 aaKnown RBP eCLIP8.03□□□□□ -1.12
RFC1-217ENST00000639695 INSRRP14616 1297 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 FNTBP49356 437 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 ADKP55263 362 aaKnown RBP8.03□□□□□ -1.12
RFC1-217ENST00000639695 CYP4F22Q6NT55 531 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 ESPNLQ6ZVH7 1005 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 SRGAP1Q7Z6B7 1085 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 SH3RF2Q8TEC5 729 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 E2F7Q96AV8 911 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 STRBPQ96SI9 672 aaKnown RBP8.03□□□□□ -1.12
RFC1-217ENST00000639695 SPATA25Q9BR10 227 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 CD244Q9BZW8 370 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 UBA5Q9GZZ9 404 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 DDX21Q9NR30 783 aaKnown RBP eCLIP8.03□□□□□ -1.12
RFC1-217ENST00000639695 DDX20Q9UHI6 824 aaKnown RBP8.03□□□□□ -1.12
RFC1-217ENST00000639695 RWDD3Q9Y3V2 267 aa8.03□□□□□ -1.12
RFC1-217ENST00000639695 APAF1O14727 1248 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 PPP1R11O60927 126 aaPredicted RBP8.02□□□□□ -1.13
RFC1-217ENST00000639695 DBHP09172 617 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 AGXTP21549 392 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 HTR3AP46098 478 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 CAP1Q01518 475 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 UGT8Q16880 541 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 ZXDCQ2QGD7 858 aaPredicted RBP8.02□□□□□ -1.13
RFC1-217ENST00000639695 STEAP3Q658P3 488 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 ESRP1Q6NXG1 681 aaKnown RBP8.02□□□□□ -1.13
RFC1-217ENST00000639695 LIPIQ6XZB0 460 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 KCTD1Q719H9 257 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 CHST15Q7LFX5 561 aaPredicted RBP8.02□□□□□ -1.13
RFC1-217ENST00000639695 MORC1Q86VD1 984 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 SPICE1Q8N0Z3 855 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 FNIP1Q8TF40 1166 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 RTF1Q92541 710 aaKnown RBP8.02□□□□□ -1.13
RFC1-217ENST00000639695 ZNF496Q96IT1 587 aaPredicted RBP8.02□□□□□ -1.13
RFC1-217ENST00000639695 TNIP3Q96KP6 325 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 MAP3K14Q99558 947 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 PUF60Q9UHX1 559 aaKnown RBP8.02□□□□□ -1.13
RFC1-217ENST00000639695 TAGLN3Q9UI15 199 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 INTUQ9ULD6 942 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 DAAM1Q9Y4D1 1078 aa8.02□□□□□ -1.13
RFC1-217ENST00000639695 A0A1W2PQJ5 194 aa8.01□□□□□ -1.13
RFC1-217ENST00000639695 HMGB1P1B2RPK0 211 aaPredicted RBP8.01□□□□□ -1.13
RFC1-217ENST00000639695 SLC5A3P53794 718 aa8.01□□□□□ -1.13
RFC1-217ENST00000639695 SRSF2Q01130 221 aaKnown RBP8.01□□□□□ -1.13
RFC1-217ENST00000639695 DLX2Q07687 328 aaPredicted RBP8.01□□□□□ -1.13
RFC1-217ENST00000639695 NR1I3Q14994 352 aa8.01□□□□□ -1.13
RFC1-217ENST00000639695 TOR2AQ5JU69 321 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms