RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 A0A087WZ62 844 aa24.29■■□□□ 1.48
SCN1B-206ENST00000638536 MGEA5O60502 916 aa24.29■■□□□ 1.48
SCN1B-206ENST00000638536 EFCAB14O75071 495 aa24.29■■□□□ 1.48
SCN1B-206ENST00000638536 RFC5P40937 340 aa24.29■■□□□ 1.48
SCN1B-206ENST00000638536 PTPAQ15257 358 aa24.29■■□□□ 1.48
SCN1B-206ENST00000638536 PRPF31Q8WWY3 499 aaKnown RBP24.29■■□□□ 1.48
SCN1B-206ENST00000638536 FDXACB1Q9BRP7 624 aaPredicted RBP24.29■■□□□ 1.48
SCN1B-206ENST00000638536 KIAA1024Q9UPX6 916 aa24.29■■□□□ 1.48
SCN1B-206ENST00000638536 TRANK1O15050 2925 aa24.29■■□□□ 1.48
SCN1B-206ENST00000638536 PRUNE2Q8WUY3 3088 aa24.29■■□□□ 1.48
SCN1B-206ENST00000638536 LCHNA4D1U4 455 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 GJB5O95377 273 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 XRCC6P12956 609 aaKnown RBP eCLIP24.28■■□□□ 1.48
SCN1B-206ENST00000638536 DNM2P50570 870 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 CEBPZQ03701 1054 aaKnown RBP24.28■■□□□ 1.48
SCN1B-206ENST00000638536 ARL6IP4Q66PJ3 421 aaKnown RBP24.28■■□□□ 1.48
SCN1B-206ENST00000638536 SPRED2Q7Z698 418 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 NLRP7Q8WX94 980 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 NACC1Q96RE7 527 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 SEMA6BQ9H3T3 888 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 PPME1Q9Y570 386 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 PCDHA11Q9Y5I1 949 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 UPP2O95045 317 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 EIF4BP23588 611 aaKnown RBP24.28■■□□□ 1.48
SCN1B-206ENST00000638536 HAUS3Q68CZ6 603 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 KCNK18Q7Z418 384 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 USP28Q96RU2 1077 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 RAB34Q9BZG1 259 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 DDX19AQ9NUU7 478 aaKnown RBP24.28■■□□□ 1.48
SCN1B-206ENST00000638536 MSRAQ9UJ68 235 aa24.28■■□□□ 1.48
SCN1B-206ENST00000638536 USO1O60763 962 aaKnown RBP24.27■■□□□ 1.48
SCN1B-206ENST00000638536 AMHP03971 560 aa24.27■■□□□ 1.48
SCN1B-206ENST00000638536 CA3P07451 260 aa24.27■■□□□ 1.48
SCN1B-206ENST00000638536 DARSP14868 501 aaKnown RBP24.27■■□□□ 1.48
SCN1B-206ENST00000638536 RAB30Q15771 203 aa24.27■■□□□ 1.48
SCN1B-206ENST00000638536 ZNF697Q5TEC3 545 aa24.27■■□□□ 1.48
SCN1B-206ENST00000638536 TOP1MTQ969P6 601 aa24.27■■□□□ 1.48
SCN1B-206ENST00000638536 NLRP4Q96MN2 994 aa24.27■■□□□ 1.48
SCN1B-206ENST00000638536 MTRQ99707 1265 aa24.27■■□□□ 1.48
SCN1B-206ENST00000638536 JPH2Q9BR39 696 aaPredicted RBP24.27■■□□□ 1.48
SCN1B-206ENST00000638536 MTMR10Q9NXD2 777 aa24.27■■□□□ 1.48
SCN1B-206ENST00000638536 DBR1Q9UK59 544 aaKnown RBP24.27■■□□□ 1.48
SCN1B-206ENST00000638536 E9PMD0 336 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 TLL1O43897 1013 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 MAEAQ7L5Y9 396 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 SCLT1Q96NL6 688 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 PNMA5Q96PV4 448 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 ZSCAN16Q9H4T2 348 aaPredicted RBP24.26■■□□□ 1.47
SCN1B-206ENST00000638536 ZNF576Q9H609 170 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 IFT122Q9HBG6 1241 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 POLD4Q9HCU8 107 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 GPRC5CQ9NQ84 441 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 COL4A3BPQ9Y5P4 624 aa24.26■■□□□ 1.47
SCN1B-206ENST00000638536 REV3LO60673 3130 aa24.25■■□□□ 1.47
SCN1B-206ENST00000638536 DGAT1O75907 488 aa24.25■■□□□ 1.47
SCN1B-206ENST00000638536 MARCKSP29966 332 aaPredicted RBP24.25■■□□□ 1.47
SCN1B-206ENST00000638536 LAMTOR4Q0VGL1 99 aa24.25■■□□□ 1.47
SCN1B-206ENST00000638536 KRT79Q5XKE5 535 aa24.25■■□□□ 1.47
SCN1B-206ENST00000638536 GUCD1Q96NT3 240 aa24.25■■□□□ 1.47
SCN1B-206ENST00000638536 PLIN2Q99541 437 aa24.25■■□□□ 1.47
SCN1B-206ENST00000638536 ZBED2Q9BTP6 218 aa24.25■■□□□ 1.47
SCN1B-206ENST00000638536 ATP6V0A4Q9HBG4 840 aa24.25■■□□□ 1.47
SCN1B-206ENST00000638536 SRGAP2CP0DJJ0 459 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 MUTP22033 750 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 GRIN2CQ14957 1233 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 ZRSR1Q15695 479 aaKnown RBP24.24■■□□□ 1.47
SCN1B-206ENST00000638536 CRIPAKQ8N1N5 446 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 ASAP3Q8TDY4 903 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 PSPC1Q8WXF1 523 aaKnown RBP24.24■■□□□ 1.47
SCN1B-206ENST00000638536 CCDC43Q96MW1 224 aaKnown RBP24.24■■□□□ 1.47
SCN1B-206ENST00000638536 TSPYL2Q9H2G4 693 aaPredicted RBP24.24■■□□□ 1.47
SCN1B-206ENST00000638536 BHMT2Q9H2M3 363 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 MINDY3Q9H8M7 445 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 GPR182O15218 404 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 ZSCAN22P10073 491 aaPredicted RBP24.24■■□□□ 1.47
SCN1B-206ENST00000638536 GRB10Q13322 594 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 FOXD4L6Q3SYB3 417 aaPredicted RBP24.24■■□□□ 1.47
SCN1B-206ENST00000638536 FOXD4L3Q6VB84 417 aaPredicted RBP24.24■■□□□ 1.47
SCN1B-206ENST00000638536 EXOC8Q8IYI6 725 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 LRRC15Q8TF66 581 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 ADAM2Q99965 735 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 FTHL17Q9BXU8 183 aa24.24■■□□□ 1.47
SCN1B-206ENST00000638536 COL4A6Q14031 1691 aa24.23■■□□□ 1.47
SCN1B-206ENST00000638536 ARL2P36404 184 aa24.23■■□□□ 1.47
SCN1B-206ENST00000638536 DSC3Q14574 896 aa24.23■■□□□ 1.47
SCN1B-206ENST00000638536 SPECC1Q5M775 1068 aa24.23■■□□□ 1.47
SCN1B-206ENST00000638536 PADI6Q6TGC4 694 aa24.23■■□□□ 1.47
SCN1B-206ENST00000638536 ZNF410Q86VK4 478 aa24.23■■□□□ 1.47
SCN1B-206ENST00000638536 TCP11Q8WWU5 503 aa24.23■■□□□ 1.47
SCN1B-206ENST00000638536 RAD9AQ99638 391 aa24.23■■□□□ 1.47
SCN1B-206ENST00000638536 GCOM2Q9BZD3 368 aaPredicted RBP24.23■■□□□ 1.47
SCN1B-206ENST00000638536 SLC28A3Q9HAS3 691 aa24.23■■□□□ 1.47
SCN1B-206ENST00000638536 TFIP11Q9UBB9 837 aaKnown RBP24.23■■□□□ 1.47
SCN1B-206ENST00000638536 SPTBN5Q9NRC6 3674 aaKnown RBP24.22■■□□□ 1.47
SCN1B-206ENST00000638536 GAS2O43903 313 aaKnown RBP24.22■■□□□ 1.47
SCN1B-206ENST00000638536 BMP15O95972 392 aa24.22■■□□□ 1.47
SCN1B-206ENST00000638536 IBSPP21815 317 aaPredicted RBP24.22■■□□□ 1.47
SCN1B-206ENST00000638536 HTRA4P83105 476 aaPredicted RBP24.22■■□□□ 1.47
SCN1B-206ENST00000638536 USP49Q70CQ1 688 aa24.22■■□□□ 1.47
SCN1B-206ENST00000638536 ZNF710Q8N1W2 664 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms