RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 CROCCP2Q86T23 111 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 STK32AQ8WU08 396 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 MTRQ99707 1265 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 INTS9Q9NV88 658 aaKnown RBP13.13□□□□□ -0.31
GFAP-228ENST00000638488 CTTNBP2NLQ9P2B4 639 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 SCOCQ9UIL1 159 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.13□□□□□ -0.31
GFAP-228ENST00000638488 SSU72P8A0A1W2PR75 194 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 CYTH3O43739 400 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 APBA3O96018 575 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 PDHA1P08559 390 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 STAT6P42226 847 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 SH3BGRP55822 239 aaPredicted RBP13.12□□□□□ -0.31
GFAP-228ENST00000638488 PPARDQ03181 441 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 TTI2Q6NXR4 508 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
GFAP-228ENST00000638488 KLHL7Q8IXQ5 586 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 LZICQ8WZA0 190 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 SEC14L1Q92503 715 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 ZC3H12CQ9C0D7 883 aaKnown RBP13.12□□□□□ -0.31
GFAP-228ENST00000638488 ZCWPW1Q9H0M4 648 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 NEUROG2Q9H2A3 272 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 ADAM7Q9H2U9 754 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 VCX3BQ9H321 246 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 RXFP1Q9HBX9 757 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 VCX3AQ9NNX9 186 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
GFAP-228ENST00000638488 CYP39A1Q9NYL5 469 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 SLC4A7Q9Y6M7 1214 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 GJB6O95452 261 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 NUDT17P0C025 328 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 RAD23BP54727 409 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 RHBDL3P58872 404 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 GRM4Q14833 912 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 ASTE1Q2TB18 679 aaPredicted RBP13.12□□□□□ -0.31
GFAP-228ENST00000638488 ARHGAP18Q8N392 663 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 KIF2BQ8N4N8 673 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 ASAP3Q8TDY4 903 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 DNAJC9Q8WXX5 260 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 FAM136AQ96C01 138 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 DLGAP2Q9P1A6 1054 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 NAV1Q8NEY1 1877 aa13.12□□□□□ -0.31
GFAP-228ENST00000638488 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
GFAP-228ENST00000638488 KLRF2D3W0D1 207 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 ECEL1O95672 775 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 TPBGLP0DKB5 382 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 MYBL1P10243 752 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 RXRBP28702 533 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
GFAP-228ENST00000638488 RFC5P40937 340 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 PMS1P54277 932 aaKnown RBP13.11□□□□□ -0.31
GFAP-228ENST00000638488 RNF220Q5VTB9 566 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 TRIM42Q8IWZ5 723 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 CEP95Q96GE4 821 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
GFAP-228ENST00000638488 SELENOSQ9BQE4 189 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 TIPINQ9BVW5 301 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 ZNF287Q9HBT7 754 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 FAM114A2Q9NRY5 505 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 ROBO3Q96MS0 1386 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 CCDC194A0A1B0GVG4 234 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 CCDC188H7C350 402 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 PEX11AO75192 247 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 PALMO75781 387 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 PLCG2P16885 1265 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 C16orf86Q6ZW13 317 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 CLEC10AQ8IUN9 316 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 SLF2Q8IX21 1173 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 AZIN2Q96A70 460 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 NDNQ99608 321 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 TXLNGYQ9BZA5 131 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 NKX1-2Q9UD57 310 aaPredicted RBP13.11□□□□□ -0.31
GFAP-228ENST00000638488 MAPK8IP1Q9UQF2 711 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 ARL2BPQ9Y2Y0 163 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 MROH7Q68CQ1 1323 aa13.11□□□□□ -0.31
GFAP-228ENST00000638488 FRMPD2Q68DX3 1309 aaPredicted RBP13.11□□□□□ -0.31
GFAP-228ENST00000638488 CCDC169A6NNP5 214 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 BUB1O43683 1085 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 CALML3P27482 149 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
GFAP-228ENST00000638488 RASSF7Q02833 373 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 DHX9Q08211 1270 aaKnown RBP13.1□□□□□ -0.31
GFAP-228ENST00000638488 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 NAB2Q15742 525 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 INF2Q27J81 1249 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 MIIPQ5JXC2 388 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 DPP8Q6V1X1 898 aaPredicted RBP13.1□□□□□ -0.31
GFAP-228ENST00000638488 ARHGAP27Q6ZUM4 889 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 ACTRT1Q8TDG2 376 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 NCSTNQ92542 709 aa13.1□□□□□ -0.31
GFAP-228ENST00000638488 TAF4BQ92750 862 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms