RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SUGCTQ9HAC7 445 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 L1RE1Q9UN81 338 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 DOCK1Q14185 1865 aa23.5■■□□□ 1.35
CLN6-224ENST00000638076 TMEM150BA6NC51 233 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 PRKCIP41743 596 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 CCDC43Q96MW1 224 aaKnown RBP23.49■■□□□ 1.35
CLN6-224ENST00000638076 UBXN6Q9BZV1 441 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 ZNF541Q9H0D2 1346 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 EXOC3O60645 756 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 TRIM49P0CI25 452 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 TRIM49CP0CI26 452 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 HMGCS2P54868 508 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 HDXQ7Z353 690 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 SLC9A9Q8IVB4 645 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 RDH13Q8NBN7 331 aa23.49■■□□□ 1.35
CLN6-224ENST00000638076 PALMO75781 387 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 DMTNQ08495 405 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 SMC1AQ14683 1233 aaKnown RBP23.48■■□□□ 1.35
CLN6-224ENST00000638076 CBWD6Q4V339 395 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 CBWD3Q5JTY5 395 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 CBWD5Q5RIA9 395 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 UTP14CQ5TAP6 766 aaKnown RBP23.48■■□□□ 1.35
CLN6-224ENST00000638076 TCEAL9Q9UHQ7 104 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 CCNE2O96020 404 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 MAPTP10636 758 aaKnown RBP23.48■■□□□ 1.35
CLN6-224ENST00000638076 PLS3P13797 630 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 PPP2R5AQ15172 486 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 C10orf76Q5T2E6 689 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 C4orf19Q8IY42 314 aa23.48■■□□□ 1.35
CLN6-224ENST00000638076 TARSL2A2RTX5 802 aaKnown RBP23.47■■□□□ 1.35
CLN6-224ENST00000638076 BACH1O14867 736 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 SNRNP48Q6IEG0 339 aaKnown RBP23.47■■□□□ 1.35
CLN6-224ENST00000638076 ZNF572Q7Z3I7 529 aaPredicted RBP23.47■■□□□ 1.35
CLN6-224ENST00000638076 REPS2Q8NFH8 660 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 TMEM206Q9H813 350 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 CD2APQ9Y5K6 639 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 WDR64B1ANS9 1081 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 JAK3P52333 1124 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 PSMC5P62195 406 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 BFSP1Q12934 665 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 ALCAMQ13740 583 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 TERF2Q15554 542 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 APOBEC3FQ8IUX4 373 aaKnown RBP23.47■■□□□ 1.35
CLN6-224ENST00000638076 TSKSQ9UJT2 592 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 NAGPAQ9UK23 515 aa23.47■■□□□ 1.35
CLN6-224ENST00000638076 KRT76Q01546 638 aa23.46■■□□□ 1.35
CLN6-224ENST00000638076 MYBPC2Q14324 1141 aa23.46■■□□□ 1.35
CLN6-224ENST00000638076 CCDC181Q5TID7 509 aa23.46■■□□□ 1.35
CLN6-224ENST00000638076 PCIF1Q9H4Z3 704 aa23.46■■□□□ 1.35
CLN6-224ENST00000638076 PCDHGC5Q9Y5F6 944 aa23.46■■□□□ 1.35
CLN6-224ENST00000638076 PARP14Q460N5 1801 aa23.46■■□□□ 1.35
CLN6-224ENST00000638076 TISP43B9A030 160 aa23.45■■□□□ 1.35
CLN6-224ENST00000638076 MCM3P25205 808 aa23.45■■□□□ 1.35
CLN6-224ENST00000638076 SFNP31947 248 aa23.45■■□□□ 1.35
CLN6-224ENST00000638076 ALKBH5Q6P6C2 394 aaKnown RBP23.45■■□□□ 1.35
CLN6-224ENST00000638076 SPATA4Q8NEY3 305 aa23.45■■□□□ 1.35
CLN6-224ENST00000638076 TRPM4Q8TD43 1214 aa23.45■■□□□ 1.35
CLN6-224ENST00000638076 ACCSQ96QU6 501 aa23.45■■□□□ 1.35
CLN6-224ENST00000638076 GPRC5CQ9NQ84 441 aa23.45■■□□□ 1.35
CLN6-224ENST00000638076 SMARCAL1Q9NZC9 954 aa23.45■■□□□ 1.35
CLN6-224ENST00000638076 GFPT2O94808 682 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 FTCDO95954 541 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 OAS2P29728 719 aaKnown RBP23.45■■□□□ 1.34
CLN6-224ENST00000638076 CCND2P30279 289 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 DSG3P32926 999 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 STAT1P42224 750 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 ITIH3Q06033 890 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 PLA2G4FQ68DD2 849 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 VSIG10LQ86VR7 867 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 C12orf42Q96LP6 360 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 EHD2Q9NZN4 543 aa23.45■■□□□ 1.34
CLN6-224ENST00000638076 NR3C2P08235 984 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 FERP16591 822 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 MYL7Q01449 175 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 XKR9Q5GH70 373 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 DNAAF5Q86Y56 855 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 MMGT1Q8N4V1 131 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 DNAJC12Q9UKB3 198 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 ZNF214Q9UL59 606 aaPredicted RBP23.44■■□□□ 1.34
CLN6-224ENST00000638076 BTNL10A8MVZ5 291 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 F8VZ95 297 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 ANXA13P27216 316 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 NPEPPSP55786 919 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 XRRA1Q6P2D8 792 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 HAUS6Q7Z4H7 955 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 VPS36Q86VN1 386 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 TIPINQ9BVW5 301 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 STK33Q9BYT3 514 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 INTS2Q9H0H0 1204 aaKnown RBP23.44■■□□□ 1.34
CLN6-224ENST00000638076 ADAMTS5Q9UNA0 930 aa23.44■■□□□ 1.34
CLN6-224ENST00000638076 POLR3GO15318 223 aaPredicted RBP23.43■■□□□ 1.34
CLN6-224ENST00000638076 EVI5O60447 810 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 ZMYND10O75800 440 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 KRT13P13646 458 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 SOX5P35711 763 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 PAFAH1B1P43034 410 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 OAZ1P54368 228 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 PEX3P56589 373 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 NLRX1Q86UT6 975 aa23.43■■□□□ 1.34
CLN6-224ENST00000638076 CBWD1Q9BRT8 395 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms