RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ALDH1A1P00352 501 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 C16orf62Q7Z3J2 963 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 A0A0G2JND7 137 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 GTF2H3Q13889 308 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 FGD2Q7Z6J4 655 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 C21orf2O43822 256 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 ESRRAP11474 423 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 PFKFB1P16118 471 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 SNX5Q9Y5X3 404 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 MFSD14CQ5VZR4 134 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 KCNV2Q8TDN2 545 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 SFI1A8K8P3 1242 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 BPIFB4P59827 614 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 SYTL3Q4VX76 610 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 COBLL1Q53SF7 1204 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 TRIM42Q8IWZ5 723 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 RMDN1Q96DB5 314 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 CLIC6Q96NY7 704 aa17.42■□□□□ 0.38
CACNA1A-258ENST00000638029 ERVV-2B6SEH9 535 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 ANKRD40Q6AI12 368 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 ITPRIPL1Q6GPH6 555 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 VN1R5Q7Z5H4 357 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 SERPINI1Q99574 410 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 AP1M1Q9BXS5 423 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 ANGPTL2Q9UKU9 493 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 SYCP2LQ5T4T6 812 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 EPB41L5Q9HCM4 733 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 CAB39Q9Y376 341 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 LRRC31Q6UY01 552 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 RHPN2Q8IUC4 686 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 SMYD4Q8IYR2 804 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 STX19Q8N4C7 294 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 DHX38Q92620 1227 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 ZNF274Q96GC6 653 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 WDR47O94967 919 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 PSMA2P25787 234 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 ATXN3P54252 364 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 ST8SIA6P61647 398 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 RNF181Q9P0P0 153 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 ZBED1O96006 694 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 ATP5JP18859 108 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 EIF2AK2P19525 551 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 PAPOLBQ9NRJ5 636 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 AARSP49588 968 aaKnown RBP eCLIP17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 SH3BP5LQ7L8J4 393 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 SEL1LQ9UBV2 794 aa17.41■□□□□ 0.38
CACNA1A-258ENST00000638029 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 TAC1P20366 129 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 CFAP74Q9C0B2 1584 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 CSE1LP55060 971 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 GPR101Q96P66 508 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 SH3GL3Q99963 347 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 ARHGEF3Q9NR81 526 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 EFCAB8A8MWE9 144 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 TTLL1O95922 423 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 COPB2P35606 906 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 FANCBQ8NB91 859 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 EXOC1LA0A1B0GW35 172 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 USP14P54578 494 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 BBS9Q3SYG4 887 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 BTNL9Q6UXG8 535 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 RASGRP4Q8TDF6 673 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 SYMPKQ92797 1274 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 ADNPQ9H2P0 1102 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 ATP11BQ9Y2G3 1177 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 RASSF3Q86WH2 238 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 EDC3Q96F86 508 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 KIFC3Q9BVG8 833 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 UNC45AQ9H3U1 944 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 VEPH1Q14D04 833 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 EXOC4Q96A65 974 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 SLC13A1Q9BZW2 595 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 AIPL1Q9NZN9 384 aa17.4■□□□□ 0.38
CACNA1A-258ENST00000638029 AKT1P31749 480 aa17.39■□□□□ 0.38
CACNA1A-258ENST00000638029 KRT72Q14CN4 511 aa17.39■□□□□ 0.38
CACNA1A-258ENST00000638029 SMARCAD1Q9H4L7 1026 aa17.39■□□□□ 0.38
CACNA1A-258ENST00000638029 SLC25A13Q9UJS0 675 aa17.39■□□□□ 0.38
CACNA1A-258ENST00000638029 JRKLQ9Y4A0 524 aa17.39■□□□□ 0.38
CACNA1A-258ENST00000638029 MAP3K15Q6ZN16 1313 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 PIK3C2GO75747 1445 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 RASSF10A6NK89 507 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 TADA3O75528 432 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 OTUB1Q96FW1 271 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 MSTO1Q9BUK6 570 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 K7ERI5 159 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 KRT75O95678 551 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 APPL2Q8NEU8 664 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 CYP4F11Q9HBI6 524 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 KPNA2P52292 529 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 TMC2Q8TDI7 906 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 ASPSCR1Q9BZE9 553 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 PYROXD1Q8WU10 500 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 KBTBD13C9JR72 458 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 SPAG7O75391 227 aa17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 PSMC2P35998 433 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-258ENST00000638029 CNOT6LQ96LI5 555 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms