RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 UBA2Q9UBT2 640 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 APPL1Q9UKG1 709 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 ATP10DQ9P241 1426 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 TECP42680 631 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 FAM26FQ5R3K3 315 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 CDH24Q86UP0 819 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 CASP10Q92851 521 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 CTIFO43310 598 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 RAD23BP54727 409 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 TTC39CQ8N584 583 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 L3MBTL3Q96JM7 780 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 PRRG3Q9BZD7 231 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 CTTNQ14247 550 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 PCDH11XQ9BZA7 1347 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 PCDH11YQ9BZA8 1340 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 AATFQ9NY61 560 aaKnown RBP eCLIP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 UBAP1LF5GYI3 381 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 MRPS35P82673 323 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 SKAP1Q86WV1 359 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 ZMYM4Q5VZL5 1548 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 IKBKBO14920 756 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 LRRC63Q05C16 580 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 RASGRF1Q13972 1273 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 RBBP7Q16576 425 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 C8orf34Q49A92 452 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 ITPRIPL1Q6GPH6 555 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 NSMFQ6X4W1 530 aa20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 XPO6Q96QU8 1125 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-257ENST00000638009 HAUS5O94927 633 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 PFKFB1P16118 471 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 FAM45AQ8TCE6 357 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 ACCSQ96QU6 501 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 E7ENQ6 273 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 GGPS1O95749 300 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 TUFT1Q9NNX1 390 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 IARS2Q9NSE4 1012 aaKnown RBP20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 NDUFA13Q9P0J0 144 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 CENPXA8MT69 81 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 DDAH1O94760 285 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 KBTBD3Q8NAB2 608 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 SH3TC2Q8TF17 1288 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 FAM161BQ96MY7 647 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 CNPY3Q9BT09 278 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 FTOQ9C0B1 505 aaKnown RBP eCLIP20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 WWP1Q9H0M0 922 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 RPAP3Q9H6T3 665 aaPredicted RBP20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 KLC4Q9NSK0 619 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 KLHL8Q9P2G9 620 aaPredicted RBP20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 ZNF544Q6NX49 715 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 DDHD1Q8NEL9 900 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 ACAP3Q96P50 834 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 IL1RAPL1Q9NZN1 696 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 ZC3H7BQ9UGR2 993 aaKnown RBP20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 STX7O15400 261 aaKnown RBP20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 MIS18BP1Q6P0N0 1132 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 SLC35F6Q8N357 371 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 IMPAD1Q9NX62 359 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 AURKCQ9UQB9 309 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 C19orf18Q8NEA5 215 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 UHMK1Q8TAS1 419 aaKnown RBP20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 KRT84Q9NSB2 600 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 PRKAG2Q9UGJ0 569 aa20.53■□□□□ 0.88
CACNA1A-257ENST00000638009 hCG_2014768A0A024R1R8 64 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 SERPINH1P50454 418 aaKnown RBP20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 TSPY1Q01534 308 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 TAB1Q15750 504 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 ADRM1Q16186 407 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 VPS54Q9P1Q0 977 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 STRNO43815 780 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 NSUN2Q08J23 767 aaKnown RBP eCLIP20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 CYGBQ8WWM9 190 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 ELAC2Q9BQ52 826 aaKnown RBP20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 LRFN2Q9ULH4 789 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 GUCA1AP43080 201 aaPredicted RBP20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 BBS2Q9BXC9 721 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 AKT3Q9Y243 479 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 IYDQ6PHW0 289 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 SETD3Q86TU7 594 aaPredicted RBP20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 PSMA2P25787 234 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 PIK3R5Q8WYR1 880 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 TUBGCP4Q9UGJ1 667 aa20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 SRPRBQ9Y5M8 271 aaKnown RBP20.52■□□□□ 0.88
CACNA1A-257ENST00000638009 NPM3O75607 178 aaKnown RBP20.52■□□□□ 0.87
CACNA1A-257ENST00000638009 UFL1O94874 794 aa20.52■□□□□ 0.87
CACNA1A-257ENST00000638009 HDLBPQ00341 1268 aaKnown RBP20.52■□□□□ 0.87
CACNA1A-257ENST00000638009 KRT78Q8N1N4 520 aa20.52■□□□□ 0.87
CACNA1A-257ENST00000638009 SMIM31A0A1B0GVY4 71 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 TNPO2O14787 897 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 ALDH1B1P30837 517 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 SNX30Q5VWJ9 437 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 ITGAXP20702 1163 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 C17orf53Q8N3J3 647 aaPredicted RBP20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 NOVA2Q9UNW9 492 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 SRLQ86TD4 932 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 DMAP1Q9NPF5 467 aaPredicted RBP20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 PKN3Q6P5Z2 889 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 KLHL24Q6TFL4 600 aa20.51■□□□□ 0.87
CACNA1A-257ENST00000638009 SEPT9Q9UHD8 586 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms