RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 PDXKO00764 312 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 CBFA2T2O43439 604 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 ADCY3O60266 1144 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 DUSP11O75319 330 aaKnown RBP12.98□□□□□ -0.33
CLN6-223ENST00000637823 PRPF6O94906 941 aaKnown RBP12.98□□□□□ -0.33
CLN6-223ENST00000637823 HSPA6P17066 643 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 SCP2P22307 547 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 MARK3P27448 753 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 ABCD1P33897 745 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 HOXD13P35453 343 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 ZNF75DP51815 510 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 SPAG1Q07617 926 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 CACNB2Q08289 660 aaPredicted RBP12.98□□□□□ -0.33
CLN6-223ENST00000637823 TBC1D8BQ0IIM8 1120 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 CSGALNACT2Q8N6G5 542 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 SPIRE2Q8WWL2 714 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 PDLIM2Q96JY6 352 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 IFT74Q96LB3 600 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 KCTD10Q9H3F6 313 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 RNPEPQ9H4A4 650 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 TUT1Q9H6E5 874 aaKnown RBP12.98□□□□□ -0.33
CLN6-223ENST00000637823 GPRC5CQ9NQ84 441 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 TRPC6Q9Y210 931 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 COL1A2P08123 1366 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 IGKV6-21A0A0C4DH24 114 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 H0YCG3 227 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 SEPT4O43236 478 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 KPNA6O60684 536 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 PPP1R37O75864 691 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 SERPINC1P01008 464 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 ARL2P36404 184 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 NPTX2P47972 431 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 PEX3P56589 373 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 GTF2BQ00403 316 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 FKBP3Q00688 224 aaKnown RBP12.97□□□□□ -0.33
CLN6-223ENST00000637823 DMP1Q13316 513 aaPredicted RBP12.97□□□□□ -0.33
CLN6-223ENST00000637823 PPP2R5AQ15172 486 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 EDRF1Q3B7T1 1238 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 ZCWPW2Q504Y3 356 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 IER5Q5VY09 327 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 HAUS6Q7Z4H7 955 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 FAM114A1Q8IWE2 563 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 NELFCDQ8IXH7 590 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 ANKRD20A12PQ8NF67 263 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 RAET1EQ8TD07 263 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 PXYLP1Q8TE99 480 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 ZNF296Q8WUU4 475 aaPredicted RBP12.97□□□□□ -0.33
CLN6-223ENST00000637823 TCP11Q8WWU5 503 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 HVCN1Q96D96 273 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 MRFAP1L1Q96HT8 127 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 CTAGE1Q96RT6 745 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 BEGAINQ9BUH8 593 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 POLR3FQ9H1D9 316 aaPredicted RBP12.97□□□□□ -0.33
CLN6-223ENST00000637823 TRAF3IP3Q9Y228 551 aa12.97□□□□□ -0.33
CLN6-223ENST00000637823 TRIP12Q14669 1992 aaPredicted RBP12.96□□□□□ -0.33
CLN6-223ENST00000637823 LRRC10BA6NIK2 292 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 K7ENM7 598 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 MAGEB2O15479 319 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 CALUO43852 315 aaPredicted RBP12.96□□□□□ -0.33
CLN6-223ENST00000637823 HMGCRP04035 888 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 ZNF286BP0CG31 522 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 INSRRP14616 1297 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 ELNP15502 786 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 EEF1GP26641 437 aaKnown RBP12.96□□□□□ -0.33
CLN6-223ENST00000637823 CNGA1P29973 690 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 CDC25BP30305 580 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 SOX10P56693 466 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 UBASH3AP57075 661 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 GJA9P57773 515 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 NKX3-2P78367 333 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 ZC2HC1CQ53FD0 456 aaPredicted RBP12.96□□□□□ -0.33
CLN6-223ENST00000637823 HSP90AA4PQ58FG1 418 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 TCP11X2Q5H9J9 407 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.96□□□□□ -0.33
CLN6-223ENST00000637823 IRF2BP1Q8IU81 584 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 TMEM143Q96AN5 459 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 CEP63Q96MT8 703 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 ACCSQ96QU6 501 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 UPF3AQ9H1J1 476 aaKnown RBP12.96□□□□□ -0.33
CLN6-223ENST00000637823 TMEM206Q9H813 350 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 SPC25Q9HBM1 224 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 KMT5AQ9NQR1 393 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 TYW1Q9NV66 732 aaKnown RBP12.96□□□□□ -0.33
CLN6-223ENST00000637823 IFNKQ9P0W0 207 aa12.96□□□□□ -0.33
CLN6-223ENST00000637823 MAGEC2Q9UBF1 373 aaPredicted RBP12.96□□□□□ -0.33
CLN6-223ENST00000637823 LIMA1Q9UHB6 759 aaKnown RBP12.96□□□□□ -0.33
CLN6-223ENST00000637823 SIP14410 1827 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 RRN3P2A6NIE6 340 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 KCNJ18B7U540 433 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 SLC16A4O15374 487 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 TPM3P06753 285 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 RPL13P26373 211 aaKnown RBP12.95□□□□□ -0.34
CLN6-223ENST00000637823 DNM2P50570 870 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 SNRPFP62306 86 aaKnown RBP12.95□□□□□ -0.34
CLN6-223ENST00000637823 TRIM32Q13049 653 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 KCNJ12Q14500 433 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 MXD4Q14582 209 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms