RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PIK3CAP42336 1068 aa6□□□□□ -1.45
CHD2-227ENST00000637572 CPT1AP50416 773 aa6□□□□□ -1.45
CHD2-227ENST00000637572 ZBED6P86452 979 aa6□□□□□ -1.45
CHD2-227ENST00000637572 GABPAQ06546 454 aa6□□□□□ -1.45
CHD2-227ENST00000637572 CCDC170Q8IYT3 715 aa6□□□□□ -1.45
CHD2-227ENST00000637572 TRAF3IP1Q8TDR0 691 aaPredicted RBP6□□□□□ -1.45
CHD2-227ENST00000637572 SOCS4Q8WXH5 440 aa6□□□□□ -1.45
CHD2-227ENST00000637572 CCDC127Q96BQ5 260 aa6□□□□□ -1.45
CHD2-227ENST00000637572 AGBL1Q96MI9 1066 aa6□□□□□ -1.45
CHD2-227ENST00000637572 NAPGQ99747 312 aaPredicted RBP6□□□□□ -1.45
CHD2-227ENST00000637572 SPATC1LQ9H0A9 340 aa6□□□□□ -1.45
CHD2-227ENST00000637572 RANBP17Q9H2T7 1088 aaKnown RBP6□□□□□ -1.45
CHD2-227ENST00000637572 ERAP1Q9NZ08 941 aa6□□□□□ -1.45
CHD2-227ENST00000637572 MYO1AQ9UBC5 1043 aa6□□□□□ -1.45
CHD2-227ENST00000637572 FEZ2Q9UHY8 353 aaPredicted RBP6□□□□□ -1.45
CHD2-227ENST00000637572 AGTPBP1Q9UPW5 1226 aa6□□□□□ -1.45
CHD2-227ENST00000637572 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6□□□□□ -1.45
CHD2-227ENST00000637572 COL18A1P39060 1754 aa6□□□□□ -1.45
CHD2-227ENST00000637572 FSD2A1L4K1 749 aa6□□□□□ -1.45
CHD2-227ENST00000637572 E9PMD0 336 aa6□□□□□ -1.45
CHD2-227ENST00000637572 VWA5AO00534 786 aa6□□□□□ -1.45
CHD2-227ENST00000637572 MED7O43513 233 aa6□□□□□ -1.45
CHD2-227ENST00000637572 SPOPO43791 374 aa6□□□□□ -1.45
CHD2-227ENST00000637572 LILRB3O75022 631 aa6□□□□□ -1.45
CHD2-227ENST00000637572 RHOBTB3O94955 611 aa6□□□□□ -1.45
CHD2-227ENST00000637572 SLU7O95391 586 aaKnown RBP6□□□□□ -1.45
CHD2-227ENST00000637572 HERVK_113P62684 666 aa6□□□□□ -1.45
CHD2-227ENST00000637572 CUL4BQ13620 913 aa6□□□□□ -1.45
CHD2-227ENST00000637572 NCOA4Q13772 614 aa6□□□□□ -1.45
CHD2-227ENST00000637572 ZNF569Q5MCW4 686 aa6□□□□□ -1.45
CHD2-227ENST00000637572 PRAMEF18Q5VWM3 479 aa6□□□□□ -1.45
CHD2-227ENST00000637572 DCUN1D2Q6PH85 259 aa6□□□□□ -1.45
CHD2-227ENST00000637572 CATSPER4Q7RTX7 472 aa6□□□□□ -1.45
CHD2-227ENST00000637572 METTL23Q86XA0 190 aa6□□□□□ -1.45
CHD2-227ENST00000637572 OR6J1Q8NGC5 347 aa6□□□□□ -1.45
CHD2-227ENST00000637572 PIGOQ8TEQ8 1089 aa6□□□□□ -1.45
CHD2-227ENST00000637572 DCBLD2Q96PD2 775 aa6□□□□□ -1.45
CHD2-227ENST00000637572 MSTO1Q9BUK6 570 aa6□□□□□ -1.45
CHD2-227ENST00000637572 IFIH1Q9BYX4 1025 aaKnown RBP6□□□□□ -1.45
CHD2-227ENST00000637572 NDST4Q9H3R1 872 aa6□□□□□ -1.45
CHD2-227ENST00000637572 KCNH7Q9NS40 1196 aa6□□□□□ -1.45
CHD2-227ENST00000637572 PLIN4Q96Q06 1357 aa6□□□□□ -1.45
CHD2-227ENST00000637572 MYO9BQ13459 2157 aa6□□□□□ -1.45
CHD2-227ENST00000637572 EIF3DO15371 548 aaKnown RBP eCLIP6□□□□□ -1.454e-7■■■□□ 15.5
CHD2-227ENST00000637572 SLC16A3O15427 465 aaKnown RBP6□□□□□ -1.45
CHD2-227ENST00000637572 MAPK1P28482 360 aa6□□□□□ -1.45
CHD2-227ENST00000637572 TCP11X2Q5H9J9 407 aa6□□□□□ -1.45
CHD2-227ENST00000637572 ENOSF1Q7L5Y1 443 aa6□□□□□ -1.45
CHD2-227ENST00000637572 SFR1Q86XK3 245 aa6□□□□□ -1.45
CHD2-227ENST00000637572 PPM1KQ8N3J5 372 aa6□□□□□ -1.45
CHD2-227ENST00000637572 CCDC26Q8TAB7 109 aa6□□□□□ -1.45
CHD2-227ENST00000637572 MAK16Q9BXY0 300 aaKnown RBP6□□□□□ -1.45
CHD2-227ENST00000637572 MCOLN1Q9GZU1 580 aa6□□□□□ -1.45
CHD2-227ENST00000637572 CTTNBP2NLQ9P2B4 639 aa6□□□□□ -1.45
CHD2-227ENST00000637572 RGPD5Q99666 1765 aa6□□□□□ -1.45
CHD2-227ENST00000637572 ATP8B3O60423 1300 aa6□□□□□ -1.45
CHD2-227ENST00000637572 POTEFA5A3E0 1075 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 FZD9O00144 591 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 CYP3A4P08684 503 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 H2AFZP0C0S5 128 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 POTEIP0CG38 1075 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 ZNF16P17020 682 aaPredicted RBP5.99□□□□□ -1.45
CHD2-227ENST00000637572 LACTBP83111 547 aaPredicted RBP5.99□□□□□ -1.45
CHD2-227ENST00000637572 EDRF1Q3B7T1 1238 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 PPP2R2DQ66LE6 453 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 POTEGQ6S5H5 508 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 POTEEQ6S8J3 1075 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 H2AFVQ71UI9 128 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 DPH6Q7L8W6 267 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 NCAPGQ9BPX3 1015 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 LZTFL1Q9NQ48 299 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 LRFN2Q9ULH4 789 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 NUB1Q9Y5A7 615 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 PCDHGA4Q9Y5G9 962 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 MORC2Q9Y6X9 1032 aaPredicted RBP5.99□□□□□ -1.45
CHD2-227ENST00000637572 RGPD2P0DJD1 1756 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 NR3C1P04150 777 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 ERCC3P19447 782 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 DNAJB2P25686 324 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 POLR2FP61218 127 aaKnown RBP5.99□□□□□ -1.45
CHD2-227ENST00000637572 HLTFQ14527 1009 aaKnown RBP eCLIP5.99□□□□□ -1.458e-8■■■□□ 18
CHD2-227ENST00000637572 PKN1Q16512 942 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 DGKDQ16760 1214 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 CRTC2Q53ET0 693 aaPredicted RBP5.99□□□□□ -1.45
CHD2-227ENST00000637572 OXLD1Q5BKU9 147 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 IER5Q5VY09 327 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 EP400NLQ6ZTU2 488 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 FRMD5Q7Z6J6 570 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 FAM161BQ96MY7 647 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 SLC38A10Q9HBR0 1119 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 NLRC4Q9NPP4 1024 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 KIAA1522Q9P206 1035 aaPredicted RBP5.99□□□□□ -1.45
CHD2-227ENST00000637572 TUBE1Q9UJT0 475 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 PCDHGC3Q9UN70 934 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 PCDHB9Q9Y5E1 797 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 ATRNL1Q5VV63 1379 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 SORBS3O60504 671 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 CA8P35219 290 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 DNA2P51530 1060 aa5.99□□□□□ -1.45
CHD2-227ENST00000637572 ARHGAP44Q17R89 818 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms