RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 BORCS6Q96GS4 357 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 PTPN18Q99952 460 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 IRX2Q9BZI1 471 aaPredicted RBP23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 FAM184BQ9ULE4 1060 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 MAFBQ9Y5Q3 323 aaPredicted RBP23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 ACTN1P12814 892 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 NPTX2P47972 431 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 NCKAP1LP55160 1127 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 SPRYD7Q5W111 196 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 RRAGAQ7L523 313 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 BAP1Q92560 729 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 COPS5Q92905 334 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 CBWD1Q9BRT8 395 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 PDGFCQ9NRA1 345 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 REXO2Q9Y3B8 237 aaKnown RBP23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 ADGRA3Q8IWK6 1321 aa23.75■■□□□ 1.39
CHRNA7-228ENST00000637519 DKC1O60832 514 aaKnown RBP eCLIP23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 AFPP02771 609 aaKnown RBP23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 OATP04181 439 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 FKBP1BP68106 108 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 XKR3Q5GH77 459 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 TIPINQ9BVW5 301 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 DMAC2Q9NW81 257 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 DNAI1Q9UI46 699 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 DDX41Q9UJV9 622 aaKnown RBP23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 TFR2Q9UP52 801 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 PSMC2P35998 433 aaKnown RBP23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 GTF2BQ00403 316 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 DMP1Q13316 513 aaPredicted RBP23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 TRIM50Q86XT4 487 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 ZNF397Q8NF99 534 aaPredicted RBP23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 TSC1Q92574 1164 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 ACCSQ96QU6 501 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 MLXIPQ9HAP2 919 aa23.74■■□□□ 1.39
CHRNA7-228ENST00000637519 PCNTO95613 3336 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 UNCXA6NJT0 531 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 NDUFA10O95299 355 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 MAPTP10636 758 aaKnown RBP23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 SLC9A1P19634 815 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 TCF7P36402 384 aaPredicted RBP23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 POLR2FP61218 127 aaKnown RBP23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 ETF1P62495 437 aaKnown RBP23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 NEDD9Q14511 834 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 NFIL3Q16649 462 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 HSDL1Q3SXM5 330 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 TMEM161BQ8NDZ6 487 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 SHCBP1Q8NEM2 672 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 MYRIPQ8NFW9 859 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 PDLIM7Q9NR12 457 aa23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 EPN1Q9Y6I3 576 aaPredicted RBP23.73■■□□□ 1.39
CHRNA7-228ENST00000637519 IGKV6D-21A0A0A0MT36 114 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 EXOC3O60645 756 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 DGAT1O75907 488 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 TRIM49P0CI25 452 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 TRIM49CP0CI26 452 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 METTL7BQ6UX53 244 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 CACNA2D4Q7Z3S7 1137 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 KIF18AQ8NI77 898 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 POLR3FQ9H1D9 316 aaPredicted RBP23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 ATP6V0A4Q9HBG4 840 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 METTL14Q9HCE5 456 aaKnown RBP23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 MARK3P27448 753 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 ADORA2AP29274 412 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 EMC2Q15006 297 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 ANKRD23Q86SG2 305 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 TMEM143Q96AN5 459 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 WDR24Q96S15 920 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 NHEJ1Q9H9Q4 299 aaPredicted RBP23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 KMT5AQ9NQR1 393 aa23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 ZNHIT6Q9NWK9 470 aaKnown RBP23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 MYH9P35579 1960 aaKnown RBP23.72■■□□□ 1.39
CHRNA7-228ENST00000637519 DENND3A2RUS2 1198 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 POLGP54098 1239 aaPredicted RBP23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 TMEM206Q9H813 350 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 TRIM10Q9UDY6 481 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 FRMD4BQ9Y2L6 1034 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 ZNFX1Q9P2E3 1918 aaKnown RBP23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 KIF2AO00139 706 aaPredicted RBP23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 TGFB3P10600 412 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 ALCAMQ13740 583 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 GJC2Q5T442 439 aaPredicted RBP23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 PDXDC1Q6P996 788 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 ARMCX2Q7L311 632 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 KIFAP3Q92845 792 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 MPHOSPH6Q99547 160 aaKnown RBP23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 ST6GALNAC4Q9H4F1 302 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 ARHGAP20Q9P2F6 1191 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 TBX20Q9UMR3 447 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 PLAGL2Q9UPG8 496 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 PAXBP1Q9Y5B6 917 aa23.71■■□□□ 1.39
CHRNA7-228ENST00000637519 ANKRD63C9JTQ0 380 aa23.7■■□□□ 1.38
CHRNA7-228ENST00000637519 STAT5BP51692 787 aa23.7■■□□□ 1.38
CHRNA7-228ENST00000637519 HUNKP57058 714 aa23.7■■□□□ 1.38
CHRNA7-228ENST00000637519 GNG11P61952 73 aa23.7■■□□□ 1.38
CHRNA7-228ENST00000637519 DPY19L2P1Q6NXN4 242 aa23.7■■□□□ 1.38
CHRNA7-228ENST00000637519 MCPH1Q8NEM0 835 aa23.7■■□□□ 1.38
CHRNA7-228ENST00000637519 GOLGA5Q8TBA6 731 aa23.7■■□□□ 1.38
CHRNA7-228ENST00000637519 GANQ9H2C0 597 aa23.7■■□□□ 1.38
CHRNA7-228ENST00000637519 CEP72Q9P209 647 aa23.7■■□□□ 1.38
CHRNA7-228ENST00000637519 USP20Q9Y2K6 914 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms