RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	NME8	Q8N427	588 aa		11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	SAMD3	Q8N6K7	520 aa		11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	KDF1	Q8NAX2	398 aa	Predicted RBP	11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	SEPT1	Q8WYJ6	367 aa		11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	GPATCH3	Q96I76	525 aa		11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	WDR6	Q9NNW5	1121 aa	Known RBP	11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	LHX6	Q9UPM6	363 aa		11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	CLUH	O75153	1309 aa		11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	SMG1	Q96Q15	3661 aa	Known RBP	11.28	□□□□□ -0.6
SPTAN1-231	ENST00000636337	LOC400499	M0QZD8	3231 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	RALGAPA1	Q6GYQ0	2036 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	SMIM35	A0A1B0GVV1	85 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	FAM170B	A6NMN3	283 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	RET	P07949	1114 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PARP1	P09874	1014 aa	Known RBP	11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	KLRC2	P26717	231 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	CLCN4	P51793	760 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	RING1	Q06587	406 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	HTR4	Q13639	388 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	WTAP	Q15007	396 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PLCB4	Q15147	1175 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	CLLU1OS	Q5K130	101 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	ODR4	Q5SWX8	454 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	TMEM173	Q86WV6	379 aa	Predicted RBP	11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	RNF169	Q8NCN4	708 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PANK1	Q8TE04	598 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	BBX	Q8WY36	941 aa	Predicted RBP	11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	NUMBL	Q9Y6R0	609 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	FRMPD4	Q14CM0	1322 aa		11.27	□□□□□ -0.61
SPTAN1-231	ENST00000636337	ZBTB5	O15062	677 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MAGEA9	P43362	315 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	POLG	P54098	1239 aa	Predicted RBP	11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	HAND2	P61296	217 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	GPC5	P78333	572 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	CSRP2	Q16527	193 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PRR23B	Q6ZRT6	265 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	DDX53	Q86TM3	631 aa	Known RBP	11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	DGKH	Q86XP1	1220 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MIER1	Q8N108	512 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PPP1R16B	Q96T49	567 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	DDX23	Q9BUQ8	820 aa	Known RBP	11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	KAT14	Q9H8E8	782 aa		11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PRMT8	Q9NR22	394 aa	Predicted RBP	11.26	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MYH15	Q9Y2K3	1946 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	CCDC195	A0A1B0GUA6	201 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	SRRM3	A6NNA2	597 aa	Predicted RBP	11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	ANHX	E9PGG2	379 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	ATP9A	O75110	1047 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	LAMP2	P13473	410 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	NCL	P19338	710 aa	Known RBP	11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	CD72	P21854	359 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	DSC3	Q14574	896 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	ALX1	Q15699	326 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MLF2	Q15773	248 aa	Predicted RBP	11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MTHFD1L	Q6UB35	978 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MFSD6	Q6ZSS7	791 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	GET4	Q7L5D6	327 aa	Predicted RBP	11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	NLRX1	Q86UT6	975 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	FAM228A	Q86W67	206 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	CELF5	Q8N6W0	485 aa	Known RBP	11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	CMAS	Q8NFW8	434 aa	Predicted RBP	11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	HELQ	Q8TDG4	1101 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	KLHL5	Q96PQ7	755 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	OSMR	Q99650	979 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MYL10	Q9BUA6	226 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	EMILIN2	Q9BXX0	1053 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	OSBPL6	Q9BZF3	934 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MAN1C1	Q9NR34	630 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PKD2L1	Q9P0L9	805 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	DMXL2	Q8TDJ6	3036 aa		11.25	□□□□□ -0.61
SPTAN1-231	ENST00000636337	FGA	P02671	866 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	SSB	P05455	408 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	CNP	P09543	421 aa	Known RBP	11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MYB	P10242	640 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	KCNA2	P16389	499 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PRKCQ	Q04759	706 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	KIZ	Q2M2Z5	673 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	ZBTB41	Q5SVQ8	909 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PCNX4	Q63HM2	1172 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	ECHDC2	Q86YB7	292 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	HOMER1	Q86YM7	354 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	TBC1D10C	Q8IV04	446 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	STAG2	Q8N3U4	1231 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	SMG7	Q92540	1137 aa	Known RBP	11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	TNPO1	Q92973	898 aa	Known RBP	11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MTMR8	Q96EF0	704 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	IGSF21	Q96ID5	467 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	PCYT2	Q99447	389 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	RPP25	Q9BUL9	199 aa	Known RBP	11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	MRPL9	Q9BYD2	267 aa	Known RBP	11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	AZI2	Q9H6S1	392 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	LTB4R2	Q9NPC1	389 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	ITPR1	Q14643	2758 aa		11.24	□□□□□ -0.61
SPTAN1-231	ENST00000636337	TAF4	O00268	1085 aa		11.23	□□□□□ -0.61
SPTAN1-231	ENST00000636337	INPPL1	O15357	1258 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms