RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SLC29A2Q14542 456 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 NAA25Q14CX7 972 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 BMT2Q1RMZ1 405 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 PRMT1Q99873 361 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 PLCD4Q9BRC7 762 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 TAOK3Q9H2K8 898 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 STK24Q9Y6E0 443 aa16.03■□□□□ 0.16
CACNA1A-220ENST00000635988 SYNGAP1Q96PV0 1343 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 XIRP1Q702N8 1843 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 NR3C1P04150 777 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 GIT2Q14161 759 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 DCAF12L1Q5VU92 463 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 ZDHHC24Q6UX98 284 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 TBC1D1Q86TI0 1168 aaPredicted RBP16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 ERMNQ8TAM6 284 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 LNX1Q8TBB1 728 aaPredicted RBP16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 RUNDC3BQ96NL0 473 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 KCNMB3Q9NPA1 279 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 OSGEPQ9NPF4 335 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 HOMER3Q9NSC5 361 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 MTMR4Q9NYA4 1195 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 NOP53Q9NZM5 478 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 C15orf41Q9Y2V0 281 aa16.02■□□□□ 0.16
CACNA1A-220ENST00000635988 GPR75-ASB3A0A0A6YYF3 556 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 MIF4GDA9UHW6 222 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 PPP1R12BO60237 982 aaPredicted RBP16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 PHF2O75151 1096 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 RTN2O75298 545 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 RPSAP08865 295 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 ALADP13716 330 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 CASP5P51878 434 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 BICDL1Q6ZP65 573 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 ZNF804AQ7Z570 1209 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 FBXO25Q8TCJ0 367 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 FAXDC2Q96IV6 333 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 MOV10L1Q9BXT6 1211 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 STK33Q9BYT3 514 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 ROPN1BQ9BZX4 212 aaPredicted RBP16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 PSTPIP2Q9H939 334 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 JMJD4Q9H9V9 463 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 ROPN1Q9HAT0 212 aaPredicted RBP16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 DNM3Q9UQ16 869 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 SNX24Q9Y343 169 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 ROBO1Q9Y6N7 1651 aa16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.15
CACNA1A-220ENST00000635988 TNRC6CQ9HCJ0 1690 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 SNX3O60493 162 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 GGPS1O95749 300 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 NQO1P15559 274 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 TNFAIP8L3Q5GJ75 292 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 MFSD5Q6N075 450 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 SYT2Q8N9I0 419 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 NSMCE1Q8WV22 266 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 AJAP1Q9UKB5 411 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 HADHBP55084 474 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 IFI35P80217 286 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 ZNF543Q08ER8 600 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 FAM133BQ5BKY9 247 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 SFR1Q86XK3 245 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 GLYCTKQ8IVS8 523 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 GLG1Q92896 1179 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 GJA10Q969M2 543 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 STAMBPL1Q96FJ0 436 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 PCYOX1Q9UHG3 505 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 USP15Q9Y4E8 981 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 RPTORQ8N122 1335 aa16.01■□□□□ 0.15
CACNA1A-220ENST00000635988 COL14A1Q05707 1796 aaKnown RBP16■□□□□ 0.15
CACNA1A-220ENST00000635988 CYP3A7-CYP3A51PA0A087WV96 503 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 RASGRF2O14827 1237 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 MED24O75448 989 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 SUN1O94901 812 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 ANP32DO95626 131 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 KRT13P13646 458 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 CCND1P24385 295 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 CYP3A7P24462 503 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 CALRP27797 417 aaKnown RBP16■□□□□ 0.15
CACNA1A-220ENST00000635988 MYO1EQ12965 1108 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 ACCSLQ4AC99 568 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 MOXD1Q6UVY6 613 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 RHOT2Q8IXI1 618 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 ADGRF4Q8IZF3 695 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 UBL4BQ8N7F7 174 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 IFT74Q96LB3 600 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 ERVK-5Q9HDB9 667 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 GPCPD1Q9NPB8 672 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 GRHL1Q9NZI5 618 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 NHSQ6T4R5 1651 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 CCDC189A1A4V9 331 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 ANKRD62A6NC57 917 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 RARGP13631 454 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 VCAM1P19320 739 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 HOXD13P35453 343 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 PTGIRP43119 386 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 CNGA2Q16280 664 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 TBC1D9BQ66K14 1250 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 SLF2Q8IX21 1173 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 L3MBTL3Q96JM7 780 aaPredicted RBP16■□□□□ 0.15
CACNA1A-220ENST00000635988 REEP2Q9BRK0 252 aa16■□□□□ 0.15
CACNA1A-220ENST00000635988 ANKIB1Q9P2G1 1089 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms