RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 C7orf31Q8N865 590 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 SYT2Q8N9I0 419 aaPredicted RBP10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 SLC7A3Q8WY07 619 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 SYMPKQ92797 1274 aaKnown RBP10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 FBXL5Q9UKA1 691 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 TRPA1O75762 1119 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 ARHGDIAP52565 204 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 PTK2Q05397 1052 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 BLIDQ8IZY5 108 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 RAPGEF5Q92565 580 aa10.52□□□□□ -0.73
SPTAN1-228ENST00000635853 E9PCH4 1651 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ABLIM1O14639 778 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 E2F6O75461 281 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 KPNA2P52292 529 aaKnown RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 LMNB2Q03252 620 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 YWHAHQ04917 246 aaPredicted RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 SNX19Q92543 992 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ARL8AQ96BM9 186 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 DHTKD1Q96HY7 919 aaPredicted RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 NR1H4Q96RI1 486 aaPredicted RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ATXN10Q9UBB4 475 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 MED7O43513 233 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 INHBAP08476 426 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 IFNA8P32881 189 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 THEM5Q8N1Q8 247 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 CYTH2Q99418 400 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 KMT5AQ9NQR1 393 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 BABAM1Q9NWV8 329 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 SCHIP1Q9P0W5 487 aaPredicted RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ATF5Q9Y2D1 282 aaPredicted RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 LAMC1P11047 1609 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 TEX33O43247 280 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 KRT75O95678 551 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 UBTFL6P0CB48 400 aaPredicted RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 NLGN1Q8N2Q7 840 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 PMLP29590 882 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 KLC3Q6P597 504 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ADAT2Q7Z6V5 191 aaKnown RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 KIF2BQ8N4N8 673 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ARMCX3Q9UH62 379 aaPredicted RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ESYT3A0FGR9 886 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 EEPD1Q7L9B9 569 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 GRAMD1CQ8IYS0 662 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 SPICE1Q8N0Z3 855 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ENAHQ8N8S7 591 aaPredicted RBP10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ICA1LQ8NDH6 482 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 ERVK-7P63135 1459 aa10.51□□□□□ -0.73
SPTAN1-228ENST00000635853 APOEP02649 317 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 HSPA6P17066 643 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 CYP27A1Q02318 531 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 DALRD3Q5D0E6 543 aaKnown RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 IRGCQ6NXR0 463 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 FRA10AC1Q70Z53 315 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 KAT2BQ92831 832 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 PAGE5Q96GU1 130 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 EIF2AQ9BY44 585 aaKnown RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TMEM165Q9HC07 324 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 PRDM5Q9NQX1 630 aaPredicted RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 SERPING1P05155 500 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 BPIFB4P59827 614 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 NEK8Q86SG6 692 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 AP1M1Q9BXS5 423 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 ANLNQ9NQW6 1124 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TRPC5Q9UL62 973 aaPredicted RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 SYNDIG1LA6NDD5 238 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 ASAP2O43150 1006 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 GYG1P46976 350 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 NSUN2Q08J23 767 aaKnown RBP eCLIP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 WLSQ5T9L3 541 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 URGCPQ8TCY9 931 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 PIGOQ8TEQ8 1089 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 NT5C1BQ96P26 610 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 DMAP1Q9NPF5 467 aaPredicted RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TUBA8Q9NY65 449 aaPredicted RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 PNMA3Q9UL41 463 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 USP17L12C9JPN9 530 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 USP17L21D6R901 530 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TTI1O43156 1089 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 SHOX2O60902 331 aaPredicted RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 COBLO75128 1261 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 RTN3O95197 1032 aaPredicted RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 OR52Z1P0C646 297 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 KCNA6P17658 529 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 CACNA2D1P54289 1103 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 POLR2FP61218 127 aaKnown RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 MED21Q13503 144 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TBC1D10BQ4KMP7 808 aaPredicted RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 SMYD4Q8IYR2 804 aaPredicted RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 ARHGEF1Q92888 912 aaKnown RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 GPKOWQ92917 476 aaPredicted RBP eCLIP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 FOXP1Q9H334 677 aaPredicted RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 LGALS16A8MUM7 142 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 PALMO75781 387 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 HAUS5O94927 633 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TFAMQ00059 246 aaKnown RBP10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 SPARCL1Q14515 664 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TMED2Q15363 201 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 ARL13BQ3SXY8 428 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 ARMCX2Q7L311 632 aa10.5□□□□□ -0.73
SPTAN1-228ENST00000635853 TMEM106CQ9BVX2 250 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms