RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 PSPC1Q8WXF1 523 aaKnown RBP17.23■□□□□ 0.35
CLN6-211ENST00000635754 IFIH1Q9BYX4 1025 aaKnown RBP17.23■□□□□ 0.35
CLN6-211ENST00000635754 BHMT2Q9H2M3 363 aa17.23■□□□□ 0.35
CLN6-211ENST00000635754 MICAL3Q7RTP6 2002 aa17.23■□□□□ 0.35
CLN6-211ENST00000635754 ZBBXA8MT70 800 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 GPR32O75388 356 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 BAIAP3O94812 1187 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 EYA4O95677 639 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 DDIT3P35638 169 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 TXLNAP40222 546 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 KRT85P78386 507 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 GRB10Q13322 594 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 IKBKEQ14164 716 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 RHPN2Q8IUC4 686 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 NLRP7Q8WX94 980 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 APBB2Q92870 758 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 TMEM143Q96AN5 459 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 CLIC6Q96NY7 704 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 OSMRQ99650 979 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 OSBPL7Q9BZF2 842 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 XPNPEP1Q9NQW7 623 aa17.22■□□□□ 0.35
CLN6-211ENST00000635754 E9PMD0 336 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 EFCAB14O75071 495 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 NCLP19338 710 aaKnown RBP17.21■□□□□ 0.35
CLN6-211ENST00000635754 PAK2Q13177 524 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 TMEM119Q4V9L6 283 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 SPECC1Q5M775 1068 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 PADI6Q6TGC4 694 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 MCPH1Q8NEM0 835 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 PNMA5Q96PV4 448 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 PLIN2Q99541 437 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 CCSER1Q9C0I3 900 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 CDHR5Q9HBB8 845 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 COL4A3BPQ9Y5P4 624 aa17.21■□□□□ 0.35
CLN6-211ENST00000635754 ABHD14A-ACY1A0A1B0GW23 586 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 RPS6KA5O75582 802 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 MXD4Q14582 209 aaPredicted RBP17.21■□□□□ 0.34
CLN6-211ENST00000635754 KARSQ15046 597 aaKnown RBP17.21■□□□□ 0.34
CLN6-211ENST00000635754 HABP4Q5JVS0 413 aaKnown RBP17.21■□□□□ 0.34
CLN6-211ENST00000635754 ODR4Q5SWX8 454 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 RASIP1Q5U651 963 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 KCNK18Q7Z418 384 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 ZNF410Q86VK4 478 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 TMEM40Q8WWA1 233 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.34
CLN6-211ENST00000635754 SYMPKQ92797 1274 aaKnown RBP17.21■□□□□ 0.34
CLN6-211ENST00000635754 EPSTI1Q96J88 318 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 ZNF668Q96K58 619 aaPredicted RBP17.21■□□□□ 0.34
CLN6-211ENST00000635754 NLRP4Q96MN2 994 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 CXXC1Q9P0U4 656 aaPredicted RBP17.21■□□□□ 0.34
CLN6-211ENST00000635754 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 SLC4A7Q9Y6M7 1214 aa17.21■□□□□ 0.34
CLN6-211ENST00000635754 TCHHQ07283 1943 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 ASAP2O43150 1006 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 CUTAO60888 179 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 CYP11B2P19099 503 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 EIF4BP23588 611 aaKnown RBP17.2■□□□□ 0.34
CLN6-211ENST00000635754 CD52P31358 61 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 KCNJ6P48051 423 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 ME1P48163 572 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 LAMTOR4Q0VGL1 99 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 TCTN1Q2MV58 587 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 KSR1Q8IVT5 923 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
CLN6-211ENST00000635754 AGO3Q9H9G7 860 aaKnown RBP17.2■□□□□ 0.34
CLN6-211ENST00000635754 PADI3Q9ULW8 664 aa17.2■□□□□ 0.34
CLN6-211ENST00000635754 A0A087WZ62 844 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 GPR182O15218 404 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 SSBP05455 408 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLN6-211ENST00000635754 DARSP14868 501 aaKnown RBP17.19■□□□□ 0.34
CLN6-211ENST00000635754 PLCG1P19174 1290 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 WDR5P61964 334 aaKnown RBP17.19■□□□□ 0.34
CLN6-211ENST00000635754 TFDP1Q14186 410 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 LRIT3Q3SXY7 679 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 FAM102BQ5T8I3 360 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 USP49Q70CQ1 688 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 FDXACB1Q9BRP7 624 aaPredicted RBP17.19■□□□□ 0.34
CLN6-211ENST00000635754 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 INO80BQ9C086 356 aaPredicted RBP17.19■□□□□ 0.34
CLN6-211ENST00000635754 POLR3FQ9H1D9 316 aaPredicted RBP17.19■□□□□ 0.34
CLN6-211ENST00000635754 RCOR1Q9UKL0 485 aa17.19■□□□□ 0.34
CLN6-211ENST00000635754 CIZ1Q9ULV3 898 aaPredicted RBP17.19■□□□□ 0.34
CLN6-211ENST00000635754 NOC2LQ9Y3T9 749 aaKnown RBP17.19■□□□□ 0.34
CLN6-211ENST00000635754 PTPRSQ13332 1948 aa17.18■□□□□ 0.34
CLN6-211ENST00000635754 PLA2G4BP0C869 781 aa17.18■□□□□ 0.34
CLN6-211ENST00000635754 ARL2P36404 184 aa17.18■□□□□ 0.34
CLN6-211ENST00000635754 NFX1Q12986 1120 aaKnown RBP17.18■□□□□ 0.34
CLN6-211ENST00000635754 FAM43BQ6ZT52 329 aaPredicted RBP17.18■□□□□ 0.34
CLN6-211ENST00000635754 FAM228AQ86W67 206 aa17.18■□□□□ 0.34
CLN6-211ENST00000635754 SYT2Q8N9I0 419 aaPredicted RBP17.18■□□□□ 0.34
CLN6-211ENST00000635754 RNF149Q8NC42 400 aa17.18■□□□□ 0.34
CLN6-211ENST00000635754 SPATA32Q96LK8 384 aa17.18■□□□□ 0.34
CLN6-211ENST00000635754 SLC9A7Q96T83 725 aa17.18■□□□□ 0.34
CLN6-211ENST00000635754 SCAND2PQ9GZW5 306 aaPredicted RBP17.18■□□□□ 0.34
CLN6-211ENST00000635754 ERVK-5Q9HDB9 667 aa17.18■□□□□ 0.34
CLN6-211ENST00000635754 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.17■□□□□ 0.34
CLN6-211ENST00000635754 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.17■□□□□ 0.34
CLN6-211ENST00000635754 RBAK-RBAKDNI3L0D1 243 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms