RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 COBLO75128 1261 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 MYO1DO94832 1006 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 CPP00450 1065 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 SDC4P31431 198 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 USP11P51784 963 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 EPHB3P54753 998 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 DUOXA2Q1HG44 320 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 NOTUMQ6P988 496 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 TRIM58Q8NG06 486 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 ENOX1Q8TC92 643 aaKnown RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 MTG1Q9BT17 334 aaPredicted RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 CLCA2Q9UQC9 943 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 ABCC4O15439 1325 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 RGL2O15211 777 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 HARS2P49590 506 aaKnown RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 ADCY1Q08828 1119 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 C16orf72Q14CZ0 275 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 ENOSF1Q7L5Y1 443 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 CCDC186Q7Z3E2 898 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 XXYLT1Q8NBI6 393 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 TEKT4Q8WW24 435 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 LZTFL1Q9NQ48 299 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 TMEM51Q9NW97 253 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 KIF3CO14782 793 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 TROVE2P10155 538 aaKnown RBP eCLIP11.89□□□□□ -0.51
VPS8-227ENST00000625842 CD58P19256 250 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 IRX4P78413 519 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 EPHA7Q15375 998 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 MAP1SQ66K74 1059 aaPredicted RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 SAMD7Q7Z3H4 446 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 OSBP2Q969R2 916 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 ZBTB18Q99592 522 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 FHDC1Q9C0D6 1143 aaPredicted RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 ZMYM2Q9UBW7 1377 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 ADD1P35611 737 aaKnown RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 KPNA1P52294 538 aaPredicted RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 BTG3Q14201 252 aaPredicted RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 TTC13Q8NBP0 860 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 ARL8AQ96BM9 186 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 CCDC124Q96CT7 223 aaKnown RBP11.89□□□□□ -0.51
VPS8-227ENST00000625842 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
VPS8-227ENST00000625842 GOLGA8JA6NMD2 632 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 NPM3O75607 178 aaKnown RBP11.88□□□□□ -0.51
VPS8-227ENST00000625842 ATF2P15336 505 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 PRDX5P30044 214 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 IKBKEQ14164 716 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 HOMEZQ8IX15 550 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 KCTD17Q8N5Z5 321 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 SNX19Q92543 992 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 ZNF653Q96CK0 615 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 NCKAP1Q9Y2A7 1128 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 IQSEC2Q5JU85 1478 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 PASKQ96RG2 1323 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 TAC1P20366 129 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 DCAF4L1Q3SXM0 396 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 FAM71BQ8TC56 605 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 EPAS1Q99814 870 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 ISCA1Q9BUE6 129 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 BLZF1Q9H2G9 400 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 SERTAD1Q9UHV2 236 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 SLC26A2P50443 739 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 DGKZQ13574 1117 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 MGAT5BQ3V5L5 792 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 TDRD10Q5VZ19 366 aaKnown RBP11.88□□□□□ -0.51
VPS8-227ENST00000625842 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.88□□□□□ -0.51
VPS8-227ENST00000625842 MCUQ8NE86 351 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 CALN1Q9BXU9 219 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 OXCT2Q9BYC2 517 aaPredicted RBP11.88□□□□□ -0.51
VPS8-227ENST00000625842 POLR3FQ9H1D9 316 aaPredicted RBP11.88□□□□□ -0.51
VPS8-227ENST00000625842 SLC39A2Q9NP94 309 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 NGRNQ9NPE2 291 aaKnown RBP11.88□□□□□ -0.51
VPS8-227ENST00000625842 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
VPS8-227ENST00000625842 ZBED1O96006 694 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 IGHDP01880 384 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 NR3C2P08235 984 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 SLC2A3P11169 496 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 AVPR1AP37288 418 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 OXCT1P55809 520 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 RNF217Q8TC41 542 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 ASAP3Q8TDY4 903 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 SLC28A3Q9HAS3 691 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 DSEQ9UL01 958 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 PCDHB6Q9Y5E3 794 aa11.88□□□□□ -0.51
VPS8-227ENST00000625842 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 KCNJ18B7U540 433 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 PRKCBP05771 671 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 INHBAP08476 426 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 ZFXP17010 805 aaPredicted RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 CTCFP49711 727 aaPredicted RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 KCNJ12Q14500 433 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 ZNF484Q5JVG2 852 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 C10orf76Q5T2E6 689 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 TDRD7Q8NHU6 1098 aaKnown RBP11.87□□□□□ -0.51
VPS8-227ENST00000625842 HSPH1Q92598 858 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 BHMT2Q9H2M3 363 aa11.87□□□□□ -0.51
VPS8-227ENST00000625842 MAN1C1Q9NR34 630 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms