RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 DRP2Q13474 957 aa12.52□□□□□ -0.41
DDX41-218ENST00000625286 NTRK3Q16288 839 aa12.52□□□□□ -0.41
DDX41-218ENST00000625286 PRR16Q569H4 304 aa12.52□□□□□ -0.41
DDX41-218ENST00000625286 PDE12Q6L8Q7 609 aaKnown RBP12.52□□□□□ -0.41
DDX41-218ENST00000625286 FAM43BQ6ZT52 329 aaPredicted RBP12.52□□□□□ -0.41
DDX41-218ENST00000625286 CEP89Q96ST8 783 aa12.52□□□□□ -0.41
DDX41-218ENST00000625286 SMOC2Q9H3U7 446 aa12.52□□□□□ -0.41
DDX41-218ENST00000625286 PTPRZ1P23471 2315 aaPredicted RBP12.52□□□□□ -0.41
DDX41-218ENST00000625286 WDR87Q6ZQQ6 2873 aa12.52□□□□□ -0.41
DDX41-218ENST00000625286 TMEM150BA6NC51 233 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 C2orf71A6NGG8 1288 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 NT5C1B-RDH14C9J2C7 533 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 MSH4O15457 936 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 PRPF3O43395 683 aaKnown RBP12.51□□□□□ -0.41
DDX41-218ENST00000625286 PSAPP07602 524 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 EIF4BP23588 611 aaKnown RBP12.51□□□□□ -0.41
DDX41-218ENST00000625286 AVPR2P30518 371 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 GPC3P51654 580 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 TARBP2Q15633 366 aaKnown RBP12.51□□□□□ -0.41
DDX41-218ENST00000625286 PTPN21Q16825 1174 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 TMEM173Q86WV6 379 aaPredicted RBP12.51□□□□□ -0.41
DDX41-218ENST00000625286 SMAP1Q8IYB5 467 aaPredicted RBP12.51□□□□□ -0.41
DDX41-218ENST00000625286 SLC39A11Q8N1S5 342 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 MRPL43Q8N983 215 aaKnown RBP12.51□□□□□ -0.41
DDX41-218ENST00000625286 KCNB2Q92953 911 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 PHKBQ93100 1093 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 GLT8D2Q9H1C3 349 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 FAM86C1Q9NVL1 165 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 AKT3Q9Y243 479 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 RIF1Q5UIP0 2472 aaKnown RBP12.51□□□□□ -0.41
DDX41-218ENST00000625286 SPTBN4Q9H254 2564 aa12.51□□□□□ -0.41
DDX41-218ENST00000625286 A0A0U1RQF3 1178 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 MAGEB2O15479 319 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 CLASP2O75122 1294 aaKnown RBP12.5□□□□□ -0.41
DDX41-218ENST00000625286 WEE2P0C1S8 567 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 DARSP14868 501 aaKnown RBP12.5□□□□□ -0.41
DDX41-218ENST00000625286 RCAN1P53805 252 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 ODR4Q5SWX8 454 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 Q6ZUG5 572 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 REXO1Q8N1G1 1221 aaKnown RBP12.5□□□□□ -0.41
DDX41-218ENST00000625286 RNF169Q8NCN4 708 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 HELQQ8TDG4 1101 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 BCL7CQ8WUZ0 217 aaPredicted RBP12.5□□□□□ -0.41
DDX41-218ENST00000625286 ZNF558Q96NG5 402 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 SH2D3AQ9BRG2 576 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 NGRNQ9NPE2 291 aaKnown RBP12.5□□□□□ -0.41
DDX41-218ENST00000625286 ENTPD7Q9NQZ7 604 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 DISC1Q9NRI5 854 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 SPG21Q9NZD8 308 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 HCFC2Q9Y5Z7 792 aa12.5□□□□□ -0.41
DDX41-218ENST00000625286 PLXNA3P51805 1871 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 MEIS3P2A8K0S8 358 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 C2CD4DB7Z1M9 353 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 B4GALT3O60512 393 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 BRD1O95696 1058 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 OATP04181 439 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 METAP2P50579 478 aaKnown RBP eCLIP12.49□□□□□ -0.41
DDX41-218ENST00000625286 PTPN5P54829 565 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 SETQ01105 290 aaPredicted RBP12.49□□□□□ -0.41
DDX41-218ENST00000625286 PRKCEQ02156 737 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 B3GNT9Q6UX72 402 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 TMC7Q7Z402 723 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 SUGP1Q8IWZ8 645 aaKnown RBP12.49□□□□□ -0.41
DDX41-218ENST00000625286 C12orf76Q8N812 135 aaPredicted RBP12.49□□□□□ -0.41
DDX41-218ENST00000625286 AUTS2Q8WXX7 1259 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 SLC5A5Q92911 643 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 BRF1Q92994 677 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 UNC45AQ9H3U1 944 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 C6orf50Q9HD87 102 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 PUF60Q9UHX1 559 aaKnown RBP12.49□□□□□ -0.41
DDX41-218ENST00000625286 NAP1L2Q9ULW6 460 aaPredicted RBP12.49□□□□□ -0.41
DDX41-218ENST00000625286 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
DDX41-218ENST00000625286 NID2Q14112 1375 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 WDR64B1ANS9 1081 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 ZSCAN20P17040 1043 aaPredicted RBP12.48□□□□□ -0.41
DDX41-218ENST00000625286 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
DDX41-218ENST00000625286 BCAR1P56945 870 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 LONRF3Q496Y0 759 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 LRRC43Q8N309 656 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 KREMEN2Q8NCW0 462 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 LPPQ93052 612 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 CCDC136Q96JN2 1154 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 RIPOR3Q96MK2 946 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 VN1R3Q9BXE9 311 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 AGXT2Q9BYV1 514 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 ADAM7Q9H2U9 754 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
DDX41-218ENST00000625286 VPS54Q9P1Q0 977 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 CEP131Q9UPN4 1083 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 SNX14Q9Y5W7 946 aa12.48□□□□□ -0.41
DDX41-218ENST00000625286 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 HOXA2O43364 376 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 CHMP2AO43633 222 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 PSMD10O75832 226 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 CXCL14O95715 111 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 EOMESO95936 686 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 AFF1P51825 1210 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms