RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 SPATA5Q8NB90 893 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 OSCP1Q8WVF1 389 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 UPF1Q92900 1129 aaKnown RBP eCLIP9.92□□□□□ -0.82
USB1-216ENST00000624720 L3MBTL3Q96JM7 780 aaPredicted RBP9.92□□□□□ -0.82
USB1-216ENST00000624720 PLA2G12BQ9BX93 195 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 NAA15Q9BXJ9 866 aaKnown RBP9.92□□□□□ -0.82
USB1-216ENST00000624720 VCXQ9H320 206 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 VIPAS39Q9H9C1 493 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 RAB21Q9UL25 225 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 MINPP1Q9UNW1 487 aa9.92□□□□□ -0.82
USB1-216ENST00000624720 TRIM64A6NGJ6 449 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 TRIM64BA6NI03 449 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 KLHL41O60662 606 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 DGKIO75912 1065 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 GYS1P13807 737 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 MZF1P28698 734 aaPredicted RBP9.91□□□□□ -0.82
USB1-216ENST00000624720 RPS8P62241 208 aaKnown RBP9.91□□□□□ -0.82
USB1-216ENST00000624720 ELF3P78545 371 aaPredicted RBP9.91□□□□□ -0.82
USB1-216ENST00000624720 RALGDSQ12967 914 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 RIPK1Q13546 671 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 ME3Q16798 604 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 ARL13BQ3SXY8 428 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 SDR42E1Q8WUS8 393 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 BPIFA3Q9BQP9 254 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 CCDC177Q9NQR7 707 aaPredicted RBP9.91□□□□□ -0.82
USB1-216ENST00000624720 SLC4A7Q9Y6M7 1214 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 UBR2Q8IWV8 1755 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 NOTOA8MTQ0 251 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 ZW10O43264 779 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 DDHD2O94830 711 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 FGAP02671 866 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 KRT9P35527 623 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 SERPINB8P50452 374 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 EVX2Q03828 476 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 POU5F1BQ06416 359 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 SYDE2Q5VT97 1194 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 EGFLAMQ63HQ2 1017 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 TUBA3EQ6PEY2 450 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 CORO6Q6QEF8 472 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 ZNF600Q6ZNG1 722 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 IFNL1Q8IU54 200 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 SNF8Q96H20 258 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 ZKSCAN3Q9BRR0 538 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 HERC2P3Q9BVR0 1158 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 SNX25Q9H3E2 840 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 IL20Q9NYY1 176 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 IL1RAPL1Q9NZN1 696 aa9.91□□□□□ -0.82
USB1-216ENST00000624720 ZC3H7BQ9UGR2 993 aaKnown RBP9.91□□□□□ -0.82
USB1-216ENST00000624720 CYP2D7A0A087X1C5 515 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 KIF28PB7ZC32 967 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 F8W031 263 aaPredicted RBP9.9□□□□□ -0.82
USB1-216ENST00000624720 HIP1O00291 1037 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 SERPINB2P05120 415 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 SP100P23497 879 aaPredicted RBP9.9□□□□□ -0.82
USB1-216ENST00000624720 KLHL30Q0D2K2 578 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 MTMR3Q13615 1198 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 HLTFQ14527 1009 aaKnown RBP eCLIP9.9□□□□□ -0.82
USB1-216ENST00000624720 NR1D2Q14995 579 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 PSMD6Q15008 389 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 SIGIRRQ6IA17 410 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 ANO7Q6IWH7 933 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 C3orf62Q6ZUJ4 267 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
USB1-216ENST00000624720 GFM2Q969S9 779 aaKnown RBP9.9□□□□□ -0.82
USB1-216ENST00000624720 AIDAQ96BJ3 306 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 NSMCE3Q96MG7 304 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 CASS4Q9NQ75 786 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 TCP11L1Q9NUJ3 509 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 COL4A1P02462 1669 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 GRXCR2A6NFK2 248 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 MINDY4BA8MYZ0 360 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 H0YC42 278 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 JAK2O60674 1132 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 TMOD1P28289 359 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 HPDP32754 393 aaPredicted RBP9.9□□□□□ -0.82
USB1-216ENST00000624720 NR2C2P49116 596 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 TMED10P49755 219 aaKnown RBP9.9□□□□□ -0.82
USB1-216ENST00000624720 TPD52P55327 224 aaPredicted RBP9.9□□□□□ -0.82
USB1-216ENST00000624720 CTDSPL2Q05D32 466 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 HAUS1Q96CS2 278 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 FAM20AQ96MK3 541 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 ALG1Q9BT22 464 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.9□□□□□ -0.82
USB1-216ENST00000624720 TRPC7Q9HCX4 862 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 SCHIP1Q9P0W5 487 aaPredicted RBP9.9□□□□□ -0.82
USB1-216ENST00000624720 PFDN2Q9UHV9 154 aa9.9□□□□□ -0.82
USB1-216ENST00000624720 LAMB4A4D0S4 1761 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 GOLGA8JA6NMD2 632 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 GOLGA8TH3BQL2 631 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 PRDM1O75626 825 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 ATG7O95352 703 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 GOLGA8HP0CJ92 632 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 PDE6AP16499 860 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 EVI2BP34910 448 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 HSD17B2P37059 387 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 DYNLL1P63167 89 aaKnown RBP9.89□□□□□ -0.83
USB1-216ENST00000624720 HSP90AA5PQ58FG0 334 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 ANKRD20A2Q5SQ80 823 aa9.89□□□□□ -0.83
USB1-216ENST00000624720 ZMYM1Q5SVZ6 1142 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms