RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 RPS6KA6Q9UK32 745 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 TTC7AQ9ULT0 858 aaPredicted RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 ANGPT4Q9Y264 503 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.71□□□□□ -1.82
ATRX-212ENST00000623706 AKAP5P24588 427 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 NOS2P35228 1153 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 AMPD3Q01432 767 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 APOBRQ0VD83 1088 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 GRAMD1BQ3KR37 738 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 FAM69BQ5VUD6 431 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 DEF8Q6ZN54 512 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 BARGINQ6ZT62 677 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 SLC51BQ86UW2 128 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 MINDY2Q8NBR6 621 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 CAPSLQ8WWF8 208 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 PTCHD1Q96NR3 888 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 NUP58Q9BVL2 599 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ING2Q9H160 280 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ABCB9Q9NP78 766 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 PDRG1Q9NUG6 133 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 PTTG3PQ9NZH4 202 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 RGL1Q9NZL6 768 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 SNTNA6NMZ2 147 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 PRSS44E7EML9 344 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ARPC2O15144 300 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 TSPAN1O60635 241 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 SLFN14P0C7P3 912 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 IL12RB1P42701 662 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 CCNIQ14094 377 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ISLR2Q6UXK2 745 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 BNC2Q6ZN30 1099 aaPredicted RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 CHMP1BQ7LBR1 199 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 TRMT1LQ7Z2T5 733 aaKnown RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 CALML6Q8TD86 181 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 MKL1Q969V6 931 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 EIF2AK1Q9BQI3 630 aaKnown RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 SGIP1Q9BQI5 828 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ARMT1Q9H993 441 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 EHMT1Q9H9B1 1298 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 EXOGQ9Y2C4 368 aaKnown RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 HMX3A6NHT5 357 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ZNF879B4DU55 563 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ACTN4O43707 911 aaKnown RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 MTX2O75431 263 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 KRT38O76015 456 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 SRGAP2CP0DJJ0 459 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 PYGMP11217 842 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ATP5DP30049 168 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 CTHP32929 405 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 PIK3CBP42338 1070 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 RPS6KA3P51812 740 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 TBX4P57082 545 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 DEFA1P59665 94 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 DEFA3P59666 94 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 BST2Q10589 180 aaKnown RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 DGKDQ16760 1214 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 VWA3BQ502W6 1294 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 LDLRAP1Q5SW96 308 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 ITPRIPL1Q6GPH6 555 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 C8orf74Q6P047 294 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.71□□□□□ -1.82
ATRX-212ENST00000623706 RAB43Q86YS6 212 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 SULF1Q8IWU6 871 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 MARCH10Q8NA82 808 aaPredicted RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 MAIP1Q8WWC4 291 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 NRDE2Q9H7Z3 1164 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 KIAA1586Q9HCI6 787 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 HPS4Q9NQG7 708 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 KLHL3Q9UH77 587 aa3.71□□□□□ -1.82
ATRX-212ENST00000623706 NDRG2Q9UN36 371 aaKnown RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 FARSAQ9Y285 508 aaKnown RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 THRAP3Q9Y2W1 955 aaKnown RBP3.71□□□□□ -1.82
ATRX-212ENST00000623706 CARNS1A5YM72 827 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 BTBD18B2RXH4 712 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 TOM1O60784 492 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 B3GALNT1O75752 331 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 GSTA1P08263 222 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 GSTA2P09210 222 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 HSPA1AP0DMV8 641 aaKnown RBP3.7□□□□□ -1.82
ATRX-212ENST00000623706 HSPA1BP0DMV9 641 aaKnown RBP3.7□□□□□ -1.82
ATRX-212ENST00000623706 ACAT1P24752 427 aaKnown RBP3.7□□□□□ -1.82
ATRX-212ENST00000623706 KRT9P35527 623 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 ZNF76P36508 570 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 YWHAGP61981 247 aaKnown RBP eCLIP3.7□□□□□ -1.82
ATRX-212ENST00000623706 SSRP1Q08945 709 aaKnown RBP3.7□□□□□ -1.82
ATRX-212ENST00000623706 TRAF3Q13114 568 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 TTC22Q5TAA0 569 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 FAM45BPQ6NSW5 357 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 PDXDC2PQ6P474 469 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 ERICH1Q86X53 443 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 NUP93Q8N1F7 819 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 FBXL13Q8NEE6 735 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 STAMQ92783 540 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 INPP5DQ92835 1189 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 PHACTR3Q96KR7 559 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 SRPK1Q96SB4 655 aaKnown RBP3.7□□□□□ -1.82
ATRX-212ENST00000623706 VPS25Q9BRG1 176 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 TRIM51Q9BSJ1 452 aa3.7□□□□□ -1.82
ATRX-212ENST00000623706 FUT8Q9BYC5 575 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms