RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 AFMP43652 599 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 RGS19P49795 217 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 CCL23P55773 120 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 UBE2HP62256 183 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 MGAT3Q09327 533 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 MAPK7Q13164 816 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 SNW1Q13573 536 aaKnown RBP12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 FAM102BQ5T8I3 360 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 TAF2Q6P1X5 1199 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 SV2BQ7L1I2 683 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 DYMQ7RTS9 669 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 RHPN2Q8IUC4 686 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 DAW1Q8N136 415 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 KCTD17Q8N5Z5 321 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 RETREG2Q8NC44 543 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 BSNDQ8WZ55 320 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 SCLYQ96I15 445 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 WNT8AQ9H1J5 351 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 HIPK3Q9H422 1215 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 SUCLA2Q9P2R7 463 aaPredicted RBP12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 PPME1Q9Y570 386 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 CDY2AQ9Y6F7 541 aa12.14□□□□□ -0.47
POLR2J3-221ENST00000621093 KIAA0355O15063 1070 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 GPR32O75388 356 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 GLRA2P23416 452 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 NLRP11P59045 1033 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 MRPS6P82932 125 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 FAM160A1Q05DH4 1040 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 GIT2Q14161 759 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 KIZQ2M2Z5 673 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 IER5Q5VY09 327 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 PRPF31Q8WWY3 499 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 PAGE5Q96GU1 130 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 REEP2Q9BRK0 252 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 BLZF1Q9H2G9 400 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 KBTBD4Q9NVX7 518 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 GINS2Q9Y248 185 aa12.13□□□□□ -0.47
POLR2J3-221ENST00000621093 A0A087WZ62 844 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 TIMP1P01033 207 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 KRT18P05783 430 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 IQCF3P0C7M6 154 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 SLFN14P0C7P3 912 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 SRGAP2CP0DJJ0 459 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 RAG1P15918 1043 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 GUCY2CP25092 1073 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 TMOD1P28289 359 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 MCM4P33991 863 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 DNM2P50570 870 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 GPC3P51654 580 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 RBL2Q08999 1139 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 LAMTOR4Q0VGL1 99 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 BFSP2Q13515 415 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 CUL4BQ13620 913 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 CAPSQ13938 189 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 MBTPS1Q14703 1052 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 GPNMBQ14956 572 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 FAM26DQ5JW98 314 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 LRRC8DQ7L1W4 858 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 RPAINQ86UA6 219 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 CEP57L1Q8IYX8 460 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 NME8Q8N427 588 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 CCDC155Q8N6L0 562 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 CNNM3Q8NE01 707 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 MCPH1Q8NEM0 835 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 TCP11Q8WWU5 503 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 PSPC1Q8WXF1 523 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 DDX12PQ92771 950 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 DNAJC19Q96DA6 116 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 NLRP4Q96MN2 994 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 MAP7D2Q96T17 732 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 OSMRQ99650 979 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 JPH2Q9BR39 696 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 FDXACB1Q9BRP7 624 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 CELF4Q9BZC1 486 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 TNMDQ9H2S6 317 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 ADAMTS10Q9H324 1103 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 CUEDC2Q9H467 287 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 TRPV2Q9Y5S1 764 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 DNAH12Q6ZR08 3092 aa12.12□□□□□ -0.47
POLR2J3-221ENST00000621093 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 GAS2O43903 313 aaKnown RBP12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 CSDE1O75534 798 aaKnown RBP12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 SELPP16109 830 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 FGFR4P22455 802 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 RSPH3Q86UC2 560 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 GPT2Q8TD30 523 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 TMEM40Q8WWA1 233 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 ERCC4Q92889 916 aaPredicted RBP12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 BADQ92934 168 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 VWCEQ96DN2 955 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 PYM1Q9BRP8 204 aaKnown RBP12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 TRIM9Q9C026 710 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 ZHX3Q9H4I2 956 aa12.11□□□□□ -0.47
POLR2J3-221ENST00000621093 DACT1Q9NYF0 836 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms